RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 CHMP4BQ9H444 224 aaKnown RBP6.89□□□□□ -1.31
CNOT9-207ENST00000489687 C11orf49Q9H6J7 331 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 VCPKMTQ9H867 229 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 ARHGEF10LQ9HCE6 1279 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 ARPP21Q9UBL0 812 aaPredicted RBP6.89□□□□□ -1.31
CNOT9-207ENST00000489687 STAP2Q9UGK3 403 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 ROBO3Q96MS0 1386 aa6.89□□□□□ -1.31
CNOT9-207ENST00000489687 SLC15A5A6NIM6 579 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 FOXP2O15409 715 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 COBLO75128 1261 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 NDUFB10O96000 172 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 APPP05067 770 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 XRCC5P13010 732 aaKnown RBP6.88□□□□□ -1.31
CNOT9-207ENST00000489687 CYBAP13498 195 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 MX1P20591 662 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 SLC4A3P48751 1232 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 TMEM132BQ14DG7 1078 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 LRRC26Q2I0M4 334 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 FAM47AQ5JRC9 791 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 PRAMEF19Q5SWL8 479 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 MFSD14CQ5VZR4 134 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 LHX8Q68G74 356 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 ZSCAN25Q6NSZ9 544 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 TMED8Q6PL24 325 aaPredicted RBP6.88□□□□□ -1.31
CNOT9-207ENST00000489687 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.88□□□□□ -1.31
CNOT9-207ENST00000489687 ZDHHC16Q969W1 377 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 LRCH3Q96II8 777 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 NBPF3Q9H094 633 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 PRO3102Q9H379 93 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 TMEM51Q9NW97 253 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 OGDHLQ9ULD0 1010 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 TMX2Q9Y320 296 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 NR2E3Q9Y5X4 410 aa6.88□□□□□ -1.31
CNOT9-207ENST00000489687 LTBP2Q14767 1821 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 SALL3Q9BXA9 1300 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 DYNC1I1O14576 645 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 WDR46O15213 610 aaKnown RBP6.87□□□□□ -1.31
CNOT9-207ENST00000489687 NMT2O60551 498 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 GLRX3O76003 335 aaKnown RBP6.87□□□□□ -1.31
CNOT9-207ENST00000489687 XRCC6P12956 609 aaKnown RBP eCLIP6.87□□□□□ -1.31
CNOT9-207ENST00000489687 MAGEA10P43363 369 aaPredicted RBP6.87□□□□□ -1.31
CNOT9-207ENST00000489687 FAM193AP78312 1265 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 CTDSPL2Q05D32 466 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 COG2Q14746 738 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 GJC2Q5T442 439 aaPredicted RBP6.87□□□□□ -1.31
CNOT9-207ENST00000489687 VPS53Q5VIR6 699 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 DPP9Q86TI2 863 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 LPAR1Q92633 364 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 TRIM44Q96DX7 344 aaPredicted RBP6.87□□□□□ -1.31
CNOT9-207ENST00000489687 CEP95Q96GE4 821 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 SH2D4AQ9H788 454 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 MKNK2Q9HBH9 465 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 GOPCQ9HD26 462 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 INCENPQ9NQS7 918 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 HOMER2Q9NSB8 354 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 DDX20Q9UHI6 824 aaKnown RBP6.87□□□□□ -1.31
CNOT9-207ENST00000489687 MTMR7Q9Y216 660 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 TACC3Q9Y6A5 838 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 DDX49Q9Y6V7 483 aaKnown RBP6.87□□□□□ -1.31
CNOT9-207ENST00000489687 LRRC37A2A6NM11 1700 aa6.87□□□□□ -1.31
CNOT9-207ENST00000489687 LCTP09848 1927 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 TTC28Q96AY4 2481 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 A0A0D9SFI3 127 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 VWA5AO00534 786 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 HOXC6P09630 235 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 COL6A1P12109 1028 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 SNAP25P60880 206 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 MDM2Q00987 491 aaPredicted RBP6.86□□□□□ -1.31
CNOT9-207ENST00000489687 ZMYM1Q5SVZ6 1142 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 ANKRD45Q5TZF3 282 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 SNRNP48Q6IEG0 339 aaKnown RBP6.86□□□□□ -1.31
CNOT9-207ENST00000489687 ANKLE1Q8NAG6 615 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 REPS2Q8NFH8 660 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 FERMT2Q96AC1 680 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 KIFC2Q96AC6 838 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 CCDC17Q96LX7 622 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 FAM227BQ96M60 508 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 MMP19Q99542 508 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 SLF1Q9BQI6 1058 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 LNPKQ9C0E8 428 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 SENP6Q9GZR1 1112 aaPredicted RBP6.86□□□□□ -1.31
CNOT9-207ENST00000489687 KDM4CQ9H3R0 1056 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 KANSL2Q9H9L4 492 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 CLIP2Q9UDT6 1046 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 ZNF214Q9UL59 606 aaPredicted RBP6.86□□□□□ -1.31
CNOT9-207ENST00000489687 PPP1R9AQ9ULJ8 1098 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 RIPK3Q9Y572 518 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 CHD7Q9P2D1 2997 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 CHD9Q3L8U1 2897 aa6.86□□□□□ -1.31
CNOT9-207ENST00000489687 LAMA4Q16363 1823 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 PLIN4Q96Q06 1357 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 TTC41PQ6P2S7 1318 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 IGKV6D-41A0A0C4DH26 115 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 F5H6K3 240 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 ERC2O15083 957 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 GPR37O15354 613 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 ZFYP08048 801 aaPredicted RBP6.85□□□□□ -1.31
CNOT9-207ENST00000489687 FCER1AP12319 257 aa6.85□□□□□ -1.31
CNOT9-207ENST00000489687 ZSCAN20P17040 1043 aaPredicted RBP6.85□□□□□ -1.31
CNOT9-207ENST00000489687 PTMSP20962 102 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms