RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ASPRV1Q53RT3 343 aa9.18□□□□□ -0.94
SSR1-210ENST00000489567 GPATCH4Q5T3I0 446 aaKnown RBP9.18□□□□□ -0.94
SSR1-210ENST00000489567 CCDC174Q6PII3 467 aa9.18□□□□□ -0.94
SSR1-210ENST00000489567 NBPF11Q86T75 865 aa9.18□□□□□ -0.94
SSR1-210ENST00000489567 CCAR1Q8IX12 1150 aaKnown RBP9.18□□□□□ -0.94
SSR1-210ENST00000489567 SHCBP1Q8NEM2 672 aa9.18□□□□□ -0.94
SSR1-210ENST00000489567 SH3TC2Q8TF17 1288 aa9.18□□□□□ -0.94
SSR1-210ENST00000489567 TEX13BQ9BXU2 312 aa9.18□□□□□ -0.94
SSR1-210ENST00000489567 RANBP17Q9H2T7 1088 aaKnown RBP9.18□□□□□ -0.94
SSR1-210ENST00000489567 BRPF3Q9ULD4 1205 aa9.18□□□□□ -0.94
SSR1-210ENST00000489567 WDR19Q8NEZ3 1342 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 ELNP15502 786 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 CASTP20810 708 aaKnown RBP9.17□□□□□ -0.94
SSR1-210ENST00000489567 CYP2B6P20813 491 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 RPS6KB1P23443 525 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 PTPREP23469 700 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 GRB14Q14449 540 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 GRM4Q14833 912 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 ADGRF4Q8IZF3 695 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 RAET1EQ8TD07 263 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 NUP133Q8WUM0 1156 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 HOMER2Q9NSB8 354 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 KLRF2D3W0D1 207 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 CYTH3O43739 400 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 COBLO75128 1261 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 SLC25A27O95847 323 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 HMGB1P09429 215 aaKnown RBP9.17□□□□□ -0.94
SSR1-210ENST00000489567 ADORA2AP29274 412 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 OAZ1P54368 228 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 PRMT2P55345 433 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 IRF5Q13568 498 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 CCL14Q16627 93 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 BLOC1S2Q6QNY1 142 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 NFXL1Q6ZNB6 911 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 Q6ZUG5 572 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 CATIPQ7Z7H3 387 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 SGMS1Q86VZ5 419 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 CCDC144CPQ8IYA2 1237 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 NPLOC4Q8TAT6 608 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 UPF3BQ9BZI7 483 aaKnown RBP9.17□□□□□ -0.94
SSR1-210ENST00000489567 MROH8Q9H579 483 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 JMJD4Q9H9V9 463 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 ZSWIM6Q9HCJ5 1215 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 VAT1LQ9HCJ6 419 aa9.17□□□□□ -0.94
SSR1-210ENST00000489567 CTDP1Q9Y5B0 961 aaPredicted RBP9.17□□□□□ -0.94
SSR1-210ENST00000489567 CCDC69A6NI79 296 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 SLC15A5A6NIM6 579 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 ADCY3O60266 1144 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 DDAH1O94760 285 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 MYCP01106 439 aaPredicted RBP9.16□□□□□ -0.94
SSR1-210ENST00000489567 ICAM1P05362 532 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 PGK2P07205 417 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 FDX1P10109 184 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 GRK4P32298 578 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 TRIM32Q13049 653 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 MAP2K5Q13163 448 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 SLC9C1Q4G0N8 1177 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 MUM1L1Q5H9M0 696 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 APOA5Q6Q788 366 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 RUFY3Q7L099 469 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 CMTR1Q8N1G2 835 aaKnown RBP9.16□□□□□ -0.94
SSR1-210ENST00000489567 TMTC2Q8N394 836 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 SOCS4Q8WXH5 440 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 TRIB2Q92519 343 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 ARMC5Q96C12 935 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 CWC22Q9HCG8 908 aaKnown RBP9.16□□□□□ -0.94
SSR1-210ENST00000489567 FLRT1Q9NZU1 646 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 CCPG1Q9ULG6 757 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 IVNS1ABPQ9Y6Y0 642 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 SMCHD1A6NHR9 2005 aa9.16□□□□□ -0.94
SSR1-210ENST00000489567 STRNO43815 780 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 PPP1R11O60927 126 aaPredicted RBP9.15□□□□□ -0.94
SSR1-210ENST00000489567 PLEKHA8P1O95397 391 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 ALAS1P13196 640 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 PSMA5P28066 241 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 APOBRQ0VD83 1088 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 CDC37Q16543 378 aaPredicted RBP9.15□□□□□ -0.94
SSR1-210ENST00000489567 MICU3Q86XE3 530 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 BRF1Q92994 677 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 MTMR8Q96EF0 704 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 MMP19Q99542 508 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 LARP6Q9BRS8 491 aaKnown RBP9.15□□□□□ -0.94
SSR1-210ENST00000489567 AGXT2Q9BYV1 514 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 TM6SF1Q9BZW5 370 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 RNF146Q9NTX7 359 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 SLC12A7Q9Y666 1083 aa9.15□□□□□ -0.94
SSR1-210ENST00000489567 KLF18A0A0U1RQI7 1052 aa9.15□□□□□ -0.95
SSR1-210ENST00000489567 HOXC6P09630 235 aa9.15□□□□□ -0.95
SSR1-210ENST00000489567 FCER1AP12319 257 aa9.15□□□□□ -0.95
SSR1-210ENST00000489567 XRCC5P13010 732 aaKnown RBP9.15□□□□□ -0.95
SSR1-210ENST00000489567 RGS2P41220 211 aa9.15□□□□□ -0.95
SSR1-210ENST00000489567 TOB2Q14106 344 aaPredicted RBP9.15□□□□□ -0.95
SSR1-210ENST00000489567 MTFR1Q15390 333 aa9.15□□□□□ -0.95
SSR1-210ENST00000489567 QRICH1Q2TAL8 776 aa9.15□□□□□ -0.95
SSR1-210ENST00000489567 ABRAQ8N0Z2 381 aa9.15□□□□□ -0.95
SSR1-210ENST00000489567 FBXL16Q8N461 479 aa9.15□□□□□ -0.95
SSR1-210ENST00000489567 SRBD1Q8N5C6 995 aaKnown RBP9.15□□□□□ -0.95
SSR1-210ENST00000489567 PXYLP1Q8TE99 480 aa9.15□□□□□ -0.95
SSR1-210ENST00000489567 IL17RAQ96F46 866 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms