RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 CCDC144BQ3MJ40 725 aa14.18□□□□□ -0.14
SFXN3-207ENST00000489434 GNASQ5JWF2 1037 aa14.18□□□□□ -0.14
SFXN3-207ENST00000489434 TSHZ3Q63HK5 1081 aa14.18□□□□□ -0.14
SFXN3-207ENST00000489434 SLFN13Q68D06 897 aa14.18□□□□□ -0.14
SFXN3-207ENST00000489434 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.18□□□□□ -0.14
SFXN3-207ENST00000489434 IFNL3Q8IZI9 196 aa14.18□□□□□ -0.14
SFXN3-207ENST00000489434 LRRC47Q8N1G4 583 aaKnown RBP14.18□□□□□ -0.14
SFXN3-207ENST00000489434 NAPBQ9H115 298 aa14.18□□□□□ -0.14
SFXN3-207ENST00000489434 EPB41L4AQ9HCS5 686 aaPredicted RBP14.18□□□□□ -0.14
SFXN3-207ENST00000489434 HOMER2Q9NSB8 354 aa14.18□□□□□ -0.14
SFXN3-207ENST00000489434 TTC41PQ6P2S7 1318 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 TTC28Q96AY4 2481 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 M0R2C6 588 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 TIMP1P01033 207 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 FOSL2P15408 326 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 ITGB8P26012 769 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 CST5P28325 142 aaPredicted RBP14.17□□□□□ -0.14
SFXN3-207ENST00000489434 STAT2P52630 851 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 NOL8Q76FK4 1167 aaKnown RBP14.17□□□□□ -0.14
SFXN3-207ENST00000489434 ARMCX2Q7L311 632 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 FAM160B2Q86V87 743 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 NEDD1Q8NHV4 660 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 FSD1Q9BTV5 496 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 COL25A1Q9BXS0 654 aaPredicted RBP14.17□□□□□ -0.14
SFXN3-207ENST00000489434 ACAD9Q9H845 621 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 MYO9BQ13459 2157 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 EYSQ5T1H1 3165 aa14.17□□□□□ -0.14
SFXN3-207ENST00000489434 A0A0U1RQG5 324 aaPredicted RBP14.16□□□□□ -0.14
SFXN3-207ENST00000489434 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.16□□□□□ -0.14
SFXN3-207ENST00000489434 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.16□□□□□ -0.14
SFXN3-207ENST00000489434 TMEM232C9JQI7 657 aa14.16□□□□□ -0.14
SFXN3-207ENST00000489434 TLR3O15455 904 aaKnown RBP14.16□□□□□ -0.14
SFXN3-207ENST00000489434 ASGR1P07306 291 aa14.16□□□□□ -0.14
SFXN3-207ENST00000489434 SLC1A4P43007 532 aa14.16□□□□□ -0.14
SFXN3-207ENST00000489434 EPHB4P54760 987 aa14.16□□□□□ -0.14
SFXN3-207ENST00000489434 GJA9P57773 515 aa14.16□□□□□ -0.14
SFXN3-207ENST00000489434 TFAP4Q01664 338 aa14.16□□□□□ -0.14
SFXN3-207ENST00000489434 PPIGQ13427 754 aaKnown RBP eCLIP14.16□□□□□ -0.146e-8■■■■□ 25
SFXN3-207ENST00000489434 CCSAPQ6IQ19 270 aaPredicted RBP14.16□□□□□ -0.14
SFXN3-207ENST00000489434 CCDC144CPQ8IYA2 1237 aa14.16□□□□□ -0.14
SFXN3-207ENST00000489434 MYLIPQ8WY64 445 aa14.16□□□□□ -0.14
SFXN3-207ENST00000489434 UPF3AQ9H1J1 476 aaKnown RBP14.16□□□□□ -0.14
SFXN3-207ENST00000489434 TTYH1Q9H313 450 aaPredicted RBP14.16□□□□□ -0.14
SFXN3-207ENST00000489434 ZBTB47Q9UFB7 747 aaPredicted RBP14.16□□□□□ -0.14
SFXN3-207ENST00000489434 PLIN4Q96Q06 1357 aa14.16□□□□□ -0.14
SFXN3-207ENST00000489434 ASB14A6NK59 587 aa14.15□□□□□ -0.14
SFXN3-207ENST00000489434 PPARAQ07869 468 aa14.15□□□□□ -0.14
SFXN3-207ENST00000489434 TKFCQ3LXA3 575 aa14.15□□□□□ -0.14
SFXN3-207ENST00000489434 MFSD5Q6N075 450 aa14.15□□□□□ -0.14
SFXN3-207ENST00000489434 TMEM199Q8N511 208 aa14.15□□□□□ -0.14
SFXN3-207ENST00000489434 STAG1Q8WVM7 1258 aa14.15□□□□□ -0.14
SFXN3-207ENST00000489434 GMCL1Q96IK5 515 aa14.15□□□□□ -0.14
SFXN3-207ENST00000489434 RNF146Q9NTX7 359 aa14.15□□□□□ -0.14
SFXN3-207ENST00000489434 TBX21Q9UL17 535 aa14.15□□□□□ -0.14
SFXN3-207ENST00000489434 MYADML2A6NDP7 307 aa14.14□□□□□ -0.15
SFXN3-207ENST00000489434 ARVCFO00192 962 aa14.14□□□□□ -0.15
SFXN3-207ENST00000489434 MCCP23508 829 aa14.14□□□□□ -0.15
SFXN3-207ENST00000489434 DNAJB2P25686 324 aa14.14□□□□□ -0.15
SFXN3-207ENST00000489434 TNFAIP2Q03169 654 aa14.14□□□□□ -0.15
SFXN3-207ENST00000489434 CCDC129Q6ZRS4 1044 aa14.14□□□□□ -0.15
SFXN3-207ENST00000489434 AP5M1Q9H0R1 490 aa14.14□□□□□ -0.15
SFXN3-207ENST00000489434 STX8Q9UNK0 236 aa14.14□□□□□ -0.15
SFXN3-207ENST00000489434 TSPY2A6NKD2 308 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 ZEB2O60315 1214 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 PLA2G6O60733 806 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 CABYRO75952 493 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 ALAS1P13196 640 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 CDK7P50613 346 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 CNTN2Q02246 1040 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 ZMYM1Q5SVZ6 1142 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 PSRC1Q6PGN9 363 aaPredicted RBP14.13□□□□□ -0.15
SFXN3-207ENST00000489434 FAM133AQ8N9E0 248 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 FGD4Q96M96 766 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 TRERF1Q96PN7 1200 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 SEC62Q99442 399 aaKnown RBP14.13□□□□□ -0.15
SFXN3-207ENST00000489434 SEZ6LQ9BYH1 1024 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 MTIF3Q9H2K0 278 aaKnown RBP14.13□□□□□ -0.15
SFXN3-207ENST00000489434 A1CFQ9NQ94 594 aaKnown RBP14.13□□□□□ -0.15
SFXN3-207ENST00000489434 CDH23Q9H251 3354 aa14.13□□□□□ -0.15
SFXN3-207ENST00000489434 VCANP13611 3396 aa14.12□□□□□ -0.15
SFXN3-207ENST00000489434 MX1P20591 662 aa14.12□□□□□ -0.15
SFXN3-207ENST00000489434 FSCN1Q16658 493 aaKnown RBP14.12□□□□□ -0.15
SFXN3-207ENST00000489434 RCSD1Q6JBY9 416 aa14.12□□□□□ -0.15
SFXN3-207ENST00000489434 PI4K2BQ8TCG2 481 aa14.12□□□□□ -0.15
SFXN3-207ENST00000489434 SYMPKQ92797 1274 aaKnown RBP14.12□□□□□ -0.15
SFXN3-207ENST00000489434 TIFAQ96CG3 184 aa14.12□□□□□ -0.15
SFXN3-207ENST00000489434 AGBL1Q96MI9 1066 aa14.12□□□□□ -0.15
SFXN3-207ENST00000489434 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.12□□□□□ -0.153e-6■■■■■ 30.2
SFXN3-207ENST00000489434 ZNF576Q9H609 170 aa14.12□□□□□ -0.15
SFXN3-207ENST00000489434 ADCY6O43306 1168 aa14.11□□□□□ -0.15
SFXN3-207ENST00000489434 RANBP6O60518 1105 aaKnown RBP14.11□□□□□ -0.15
SFXN3-207ENST00000489434 NKX3-2P78367 333 aa14.11□□□□□ -0.15
SFXN3-207ENST00000489434 KCTD1Q719H9 257 aa14.11□□□□□ -0.15
SFXN3-207ENST00000489434 TLK2Q86UE8 772 aa14.11□□□□□ -0.15
SFXN3-207ENST00000489434 FAM126BQ8IXS8 530 aa14.11□□□□□ -0.15
SFXN3-207ENST00000489434 CHMP4CQ96CF2 233 aa14.11□□□□□ -0.15
SFXN3-207ENST00000489434 PPP1R12CQ9BZL4 782 aa14.11□□□□□ -0.15
SFXN3-207ENST00000489434 KATNBL1Q9H079 304 aa14.11□□□□□ -0.15
SFXN3-207ENST00000489434 CSF2RAP15509 400 aa14.1□□□□□ -0.15
SFXN3-207ENST00000489434 IRX5P78411 483 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms