RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 AMOTL1Q8IY63 956 aa19.46■□□□□ 0.71
USP48-210ENST00000489108 RHPN1Q8TCX5 695 aa19.46■□□□□ 0.71
USP48-210ENST00000489108 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.46■□□□□ 0.71
USP48-210ENST00000489108 C1QTNF1Q9BXJ1 281 aa19.46■□□□□ 0.71
USP48-210ENST00000489108 CHGBP05060 677 aa19.45■□□□□ 0.7
USP48-210ENST00000489108 HOXD11P31277 338 aaPredicted RBP19.45■□□□□ 0.7
USP48-210ENST00000489108 ADD2P35612 726 aa19.45■□□□□ 0.7
USP48-210ENST00000489108 CCL23P55773 120 aa19.45■□□□□ 0.7
USP48-210ENST00000489108 ARMCX2Q7L311 632 aa19.45■□□□□ 0.7
USP48-210ENST00000489108 FTSJ3Q8IY81 847 aaKnown RBP19.45■□□□□ 0.7
USP48-210ENST00000489108 ANKRD35Q8N283 1001 aa19.45■□□□□ 0.7
USP48-210ENST00000489108 PRPF38AQ8NAV1 312 aaKnown RBP19.45■□□□□ 0.7
USP48-210ENST00000489108 BCL11AQ9H165 835 aa19.45■□□□□ 0.7
USP48-210ENST00000489108 HIPK3Q9H422 1215 aa19.45■□□□□ 0.7
USP48-210ENST00000489108 RAVER2Q9HCJ3 691 aaKnown RBP19.45■□□□□ 0.7
USP48-210ENST00000489108 XIRP2A4UGR9 3374 aa19.44■□□□□ 0.7
USP48-210ENST00000489108 F5H6K3 240 aa19.44■□□□□ 0.7
USP48-210ENST00000489108 ATP2A1O14983 1001 aa19.44■□□□□ 0.7
USP48-210ENST00000489108 ZBED4O75132 1171 aa19.44■□□□□ 0.7
USP48-210ENST00000489108 KCNQ1P51787 676 aa19.44■□□□□ 0.7
USP48-210ENST00000489108 KLRC3Q07444 240 aa19.44■□□□□ 0.7
USP48-210ENST00000489108 CTR9Q6PD62 1173 aa19.44■□□□□ 0.7
USP48-210ENST00000489108 CXCL17Q6UXB2 119 aa19.44■□□□□ 0.7
USP48-210ENST00000489108 SLC43A3Q8NBI5 491 aa19.44■□□□□ 0.7
USP48-210ENST00000489108 KATNBL1Q9H079 304 aa19.44■□□□□ 0.7
USP48-210ENST00000489108 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.43■□□□□ 0.7
USP48-210ENST00000489108 NKX3-2P78367 333 aa19.43■□□□□ 0.7
USP48-210ENST00000489108 PPP2R2DQ66LE6 453 aa19.43■□□□□ 0.7
USP48-210ENST00000489108 CCDC144CPQ8IYA2 1237 aa19.43■□□□□ 0.7
USP48-210ENST00000489108 CLASRPQ8N2M8 674 aaKnown RBP19.43■□□□□ 0.7
USP48-210ENST00000489108 DDRGK1Q96HY6 314 aa19.43■□□□□ 0.7
USP48-210ENST00000489108 PAG1Q9NWQ8 432 aa19.43■□□□□ 0.7
USP48-210ENST00000489108 CTDP1Q9Y5B0 961 aaPredicted RBP19.43■□□□□ 0.7
USP48-210ENST00000489108 SLC4A7Q9Y6M7 1214 aa19.43■□□□□ 0.7
USP48-210ENST00000489108 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
USP48-210ENST00000489108 NDUFB10O96000 172 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 TNFAIP2Q03169 654 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 ITGA7Q13683 1181 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 SKIV2LQ15477 1246 aaKnown RBP19.42■□□□□ 0.7
USP48-210ENST00000489108 AAK1Q2M2I8 961 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 HSP90AB4PQ58FF6 505 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 NOL8Q76FK4 1167 aaKnown RBP19.42■□□□□ 0.7
USP48-210ENST00000489108 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.42■□□□□ 0.7
USP48-210ENST00000489108 KIFC2Q96AC6 838 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 TRPV6Q9H1D0 765 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 BOLA2Q9H3K6 86 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 EPHX3Q9H6B9 360 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 NYAP2Q9P242 653 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 ASTN1O14525 1302 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 GRIN2DO15399 1336 aa19.42■□□□□ 0.7
USP48-210ENST00000489108 RFXAPO00287 272 aa19.41■□□□□ 0.7
USP48-210ENST00000489108 IFIT2P09913 472 aaKnown RBP19.41■□□□□ 0.7
USP48-210ENST00000489108 CNTN2Q02246 1040 aa19.41■□□□□ 0.7
USP48-210ENST00000489108 RPUSD2Q8IZ73 545 aaKnown RBP19.41■□□□□ 0.7
USP48-210ENST00000489108 STK11IPQ8N1F8 1099 aa19.41■□□□□ 0.7
USP48-210ENST00000489108 LRFN3Q9BTN0 628 aa19.41■□□□□ 0.7
USP48-210ENST00000489108 NOC4LQ9BVI4 516 aaKnown RBP19.41■□□□□ 0.7
USP48-210ENST00000489108 WNT8AQ9H1J5 351 aa19.41■□□□□ 0.7
USP48-210ENST00000489108 SLC38A10Q9HBR0 1119 aa19.41■□□□□ 0.7
USP48-210ENST00000489108 PCDHA11Q9Y5I1 949 aa19.41■□□□□ 0.7
USP48-210ENST00000489108 PRRC2BQ5JSZ5 2229 aaKnown RBP19.4■□□□□ 0.7
USP48-210ENST00000489108 ERC2O15083 957 aa19.4■□□□□ 0.7
USP48-210ENST00000489108 CABYRO75952 493 aa19.4■□□□□ 0.7
USP48-210ENST00000489108 RASA1P20936 1047 aa19.4■□□□□ 0.7
USP48-210ENST00000489108 PTGS1P23219 599 aa19.4■□□□□ 0.7
USP48-210ENST00000489108 CHST13Q8NET6 341 aa19.4■□□□□ 0.7
USP48-210ENST00000489108 VWCEQ96DN2 955 aa19.4■□□□□ 0.7
USP48-210ENST00000489108 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.4■□□□□ 0.7
USP48-210ENST00000489108 CLIP2Q9UDT6 1046 aa19.4■□□□□ 0.7
USP48-210ENST00000489108 FBXO40Q9UH90 709 aa19.4■□□□□ 0.7
USP48-210ENST00000489108 GNEQ9Y223 722 aaKnown RBP19.4■□□□□ 0.7
USP48-210ENST00000489108 GREB1LQ9C091 1923 aaPredicted RBP19.4■□□□□ 0.7
USP48-210ENST00000489108 ZBED9Q6R2W3 1325 aa19.4■□□□□ 0.7
USP48-210ENST00000489108 ZBBXA8MT70 800 aa19.39■□□□□ 0.69
USP48-210ENST00000489108 B4GALT4O60513 344 aa19.39■□□□□ 0.69
USP48-210ENST00000489108 FSCN1Q16658 493 aaKnown RBP19.39■□□□□ 0.69
USP48-210ENST00000489108 KIF1BPQ96EK5 621 aa19.39■□□□□ 0.69
USP48-210ENST00000489108 SCLYQ96I15 445 aa19.39■□□□□ 0.69
USP48-210ENST00000489108 MTCH2Q9Y6C9 303 aa19.39■□□□□ 0.69
USP48-210ENST00000489108 DYNC1LI2O43237 492 aaPredicted RBP19.38■□□□□ 0.69
USP48-210ENST00000489108 ATP2A2P16615 1042 aaKnown RBP19.38■□□□□ 0.69
USP48-210ENST00000489108 PSMC6P62333 389 aa19.38■□□□□ 0.69
USP48-210ENST00000489108 UBE3CQ15386 1083 aa19.38■□□□□ 0.69
USP48-210ENST00000489108 TLK2Q86UE8 772 aa19.38■□□□□ 0.69
USP48-210ENST00000489108 PUS7LQ9H0K6 701 aaKnown RBP19.38■□□□□ 0.69
USP48-210ENST00000489108 AP5M1Q9H0R1 490 aa19.38■□□□□ 0.69
USP48-210ENST00000489108 CERS4Q9HA82 394 aa19.38■□□□□ 0.69
USP48-210ENST00000489108 MKNK2Q9HBH9 465 aa19.38■□□□□ 0.69
USP48-210ENST00000489108 HOMER2Q9NSB8 354 aa19.38■□□□□ 0.69
USP48-210ENST00000489108 SOWAHBA6NEL2 793 aa19.37■□□□□ 0.69
USP48-210ENST00000489108 POU3F3P20264 500 aaPredicted RBP19.37■□□□□ 0.69
USP48-210ENST00000489108 TTLL4Q14679 1199 aa19.37■□□□□ 0.69
USP48-210ENST00000489108 FAM133AQ8N9E0 248 aa19.37■□□□□ 0.69
USP48-210ENST00000489108 AGBL1Q96MI9 1066 aa19.37■□□□□ 0.69
USP48-210ENST00000489108 FEM1BQ9UK73 627 aa19.37■□□□□ 0.69
USP48-210ENST00000489108 DDX49Q9Y6V7 483 aaKnown RBP19.37■□□□□ 0.69
USP48-210ENST00000489108 MYH4Q9Y623 1939 aa19.37■□□□□ 0.69
USP48-210ENST00000489108 TRANK1O15050 2925 aa19.36■□□□□ 0.69
USP48-210ENST00000489108 ZEB2O60315 1214 aa19.36■□□□□ 0.69
USP48-210ENST00000489108 SMPD1P17405 629 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms