RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 FRMPD2Q68DX3 1309 aaPredicted RBP26.26■■□□□ 1.79
VAMP2-204ENST00000488857 GPATCH4Q5T3I0 446 aaKnown RBP26.26■■□□□ 1.79
VAMP2-204ENST00000488857 TRPV1Q8NER1 839 aa26.26■■□□□ 1.79
VAMP2-204ENST00000488857 AGBL1Q96MI9 1066 aa26.26■■□□□ 1.79
VAMP2-204ENST00000488857 NRBP1Q9UHY1 535 aa26.26■■□□□ 1.79
VAMP2-204ENST00000488857 E7EWF7 191 aa26.25■■□□□ 1.79
VAMP2-204ENST00000488857 MSCO60682 206 aa26.25■■□□□ 1.79
VAMP2-204ENST00000488857 ICAM1P05362 532 aa26.25■■□□□ 1.79
VAMP2-204ENST00000488857 SLC16A2P36021 539 aa26.25■■□□□ 1.79
VAMP2-204ENST00000488857 SEC23AQ15436 765 aa26.25■■□□□ 1.79
VAMP2-204ENST00000488857 PRPF38BQ5VTL8 546 aaKnown RBP26.25■■□□□ 1.79
VAMP2-204ENST00000488857 CYB5R4Q7L1T6 521 aa26.25■■□□□ 1.79
VAMP2-204ENST00000488857 MSL3Q8N5Y2 521 aaKnown RBP26.25■■□□□ 1.79
VAMP2-204ENST00000488857 TINF2Q9BSI4 451 aa26.25■■□□□ 1.79
VAMP2-204ENST00000488857 ACAD9Q9H845 621 aa26.25■■□□□ 1.79
VAMP2-204ENST00000488857 GPCPD1Q9NPB8 672 aa26.25■■□□□ 1.79
VAMP2-204ENST00000488857 TAF6LQ9Y6J9 622 aa26.25■■□□□ 1.79
VAMP2-204ENST00000488857 SLC4A3P48751 1232 aa26.24■■□□□ 1.79
VAMP2-204ENST00000488857 MNX1P50219 401 aaPredicted RBP26.24■■□□□ 1.79
VAMP2-204ENST00000488857 ERICH6BQ5W0A0 696 aa26.24■■□□□ 1.79
VAMP2-204ENST00000488857 DDX11Q96FC9 970 aa26.24■■□□□ 1.79
VAMP2-204ENST00000488857 DDX20Q9UHI6 824 aaKnown RBP26.24■■□□□ 1.79
VAMP2-204ENST00000488857 CEP290O15078 2479 aa26.23■■□□□ 1.79
VAMP2-204ENST00000488857 SMCHD1A6NHR9 2005 aa26.23■■□□□ 1.79
VAMP2-204ENST00000488857 CCDC174Q6PII3 467 aa26.23■■□□□ 1.79
VAMP2-204ENST00000488857 STOX1Q6ZVD7 989 aa26.23■■□□□ 1.79
VAMP2-204ENST00000488857 ZNF467Q7Z7K2 595 aaPredicted RBP26.23■■□□□ 1.79
VAMP2-204ENST00000488857 ANKRD35Q8N283 1001 aa26.23■■□□□ 1.79
VAMP2-204ENST00000488857 NCOA7Q8NI08 942 aa26.23■■□□□ 1.79
VAMP2-204ENST00000488857 RNF146Q9NTX7 359 aa26.23■■□□□ 1.79
VAMP2-204ENST00000488857 SNAP25P60880 206 aa26.22■■□□□ 1.79
VAMP2-204ENST00000488857 IFIT1BQ5T764 474 aaKnown RBP26.22■■□□□ 1.79
VAMP2-204ENST00000488857 MAMDC4Q6UXC1 1216 aa26.22■■□□□ 1.79
VAMP2-204ENST00000488857 RALYLQ86SE5 291 aaKnown RBP26.22■■□□□ 1.79
VAMP2-204ENST00000488857 TRERF1Q96PN7 1200 aa26.22■■□□□ 1.79
VAMP2-204ENST00000488857 HTATIP2Q9BUP3 242 aa26.22■■□□□ 1.79
VAMP2-204ENST00000488857 HOMER2Q9NSB8 354 aa26.22■■□□□ 1.79
VAMP2-204ENST00000488857 PNMA2Q9UL42 364 aa26.22■■□□□ 1.79
VAMP2-204ENST00000488857 CCPG1Q9ULG6 757 aa26.22■■□□□ 1.79
VAMP2-204ENST00000488857 SYNGAP1Q96PV0 1343 aa26.21■■□□□ 1.79
VAMP2-204ENST00000488857 SEPT4O43236 478 aa26.21■■□□□ 1.79
VAMP2-204ENST00000488857 CDC45O75419 566 aa26.21■■□□□ 1.79
VAMP2-204ENST00000488857 CENPBP07199 599 aaPredicted RBP26.21■■□□□ 1.79
VAMP2-204ENST00000488857 ASPRV1Q53RT3 343 aa26.21■■□□□ 1.79
VAMP2-204ENST00000488857 NECAB2Q7Z6G3 386 aa26.21■■□□□ 1.79
VAMP2-204ENST00000488857 PAWRQ96IZ0 340 aaKnown RBP26.21■■□□□ 1.79
VAMP2-204ENST00000488857 PFASO15067 1338 aa26.2■■□□□ 1.79
VAMP2-204ENST00000488857 ALAS1P13196 640 aa26.2■■□□□ 1.78
VAMP2-204ENST00000488857 CNGA1P29973 690 aa26.2■■□□□ 1.78
VAMP2-204ENST00000488857 NECTIN1Q15223 517 aa26.2■■□□□ 1.78
VAMP2-204ENST00000488857 CASC1Q6TDU7 716 aa26.2■■□□□ 1.78
VAMP2-204ENST00000488857 DIS3LQ8TF46 1054 aaKnown RBP26.2■■□□□ 1.78
VAMP2-204ENST00000488857 ANO2Q9NQ90 1003 aa26.2■■□□□ 1.78
VAMP2-204ENST00000488857 A1CFQ9NQ94 594 aaKnown RBP26.2■■□□□ 1.78
VAMP2-204ENST00000488857 WDR19Q8NEZ3 1342 aa26.19■■□□□ 1.78
VAMP2-204ENST00000488857 GOLGA8HP0CJ92 632 aa26.19■■□□□ 1.78
VAMP2-204ENST00000488857 MB21D2Q8IYB1 491 aaPredicted RBP26.19■■□□□ 1.78
VAMP2-204ENST00000488857 FAM133AQ8N9E0 248 aa26.19■■□□□ 1.78
VAMP2-204ENST00000488857 FGD4Q96M96 766 aa26.19■■□□□ 1.78
VAMP2-204ENST00000488857 PARP1P09874 1014 aaKnown RBP26.18■■□□□ 1.78
VAMP2-204ENST00000488857 MUM1L1Q5H9M0 696 aa26.18■■□□□ 1.78
VAMP2-204ENST00000488857 PRAMEF19Q5SWL8 479 aa26.18■■□□□ 1.78
VAMP2-204ENST00000488857 IFIT3O14879 490 aaKnown RBP26.17■■□□□ 1.78
VAMP2-204ENST00000488857 SLC27A2O14975 620 aa26.17■■□□□ 1.78
VAMP2-204ENST00000488857 COL6A1P12109 1028 aa26.17■■□□□ 1.78
VAMP2-204ENST00000488857 SART3Q15020 963 aaKnown RBP26.17■■□□□ 1.78
VAMP2-204ENST00000488857 MTA3Q9BTC8 594 aa26.17■■□□□ 1.78
VAMP2-204ENST00000488857 PPP4R2Q9NY27 417 aa26.17■■□□□ 1.78
VAMP2-204ENST00000488857 MCM3APO60318 1980 aa26.16■■□□□ 1.78
VAMP2-204ENST00000488857 ALPK3Q96L96 1907 aa26.16■■□□□ 1.78
VAMP2-204ENST00000488857 ERICH2A1L162 156 aa26.16■■□□□ 1.78
VAMP2-204ENST00000488857 POTEB2H3BUK9 544 aa26.16■■□□□ 1.78
VAMP2-204ENST00000488857 SNAI1O95863 264 aaPredicted RBP26.16■■□□□ 1.78
VAMP2-204ENST00000488857 ZNF865P0CJ78 1059 aaPredicted RBP26.16■■□□□ 1.78
VAMP2-204ENST00000488857 ANTXR2P58335 489 aa26.16■■□□□ 1.78
VAMP2-204ENST00000488857 CREB3L3Q68CJ9 461 aa26.16■■□□□ 1.78
VAMP2-204ENST00000488857 C11orf49Q9H6J7 331 aa26.16■■□□□ 1.78
VAMP2-204ENST00000488857 CYP39A1Q9NYL5 469 aa26.16■■□□□ 1.78
VAMP2-204ENST00000488857 CNPY2Q9Y2B0 182 aa26.16■■□□□ 1.78
VAMP2-204ENST00000488857 LCTP09848 1927 aa26.16■■□□□ 1.78
VAMP2-204ENST00000488857 IGDCC4Q8TDY8 1250 aa26.15■■□□□ 1.78
VAMP2-204ENST00000488857 UBA5Q9GZZ9 404 aa26.15■■□□□ 1.78
VAMP2-204ENST00000488857 CPVLQ9H3G5 476 aa26.15■■□□□ 1.78
VAMP2-204ENST00000488857 TAL1P17542 331 aaPredicted RBP26.14■■□□□ 1.78
VAMP2-204ENST00000488857 CNTN2Q02246 1040 aa26.14■■□□□ 1.78
VAMP2-204ENST00000488857 WTAPQ15007 396 aa26.14■■□□□ 1.78
VAMP2-204ENST00000488857 ADGRF4Q8IZF3 695 aa26.14■■□□□ 1.78
VAMP2-204ENST00000488857 DPF3Q92784 378 aa26.14■■□□□ 1.78
VAMP2-204ENST00000488857 DNM1LO00429 736 aa26.13■■□□□ 1.77
VAMP2-204ENST00000488857 CHST3Q7LGC8 479 aa26.13■■□□□ 1.77
VAMP2-204ENST00000488857 CLEC4DQ8WXI8 215 aa26.13■■□□□ 1.77
VAMP2-204ENST00000488857 SENP2Q9HC62 589 aa26.13■■□□□ 1.77
VAMP2-204ENST00000488857 MAD2L2Q9UI95 211 aa26.13■■□□□ 1.77
VAMP2-204ENST00000488857 MYH6P13533 1939 aa26.13■■□□□ 1.77
VAMP2-204ENST00000488857 DNAH12Q6ZR08 3092 aa26.13■■□□□ 1.77
VAMP2-204ENST00000488857 PALM3A6NDB9 673 aaPredicted RBP26.12■■□□□ 1.77
VAMP2-204ENST00000488857 SOWAHBA6NEL2 793 aa26.12■■□□□ 1.77
VAMP2-204ENST00000488857 NFIBO00712 420 aa26.12■■□□□ 1.77
VAMP2-204ENST00000488857 AKR1A1P14550 325 aa26.12■■□□□ 1.77
VAMP2-204ENST00000488857 TROAPQ12815 778 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms