RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 STX8Q9UNK0 236 aa14.6□□□□□ -0.07
SFXN5-219ENST00000488839 CTDP1Q9Y5B0 961 aaPredicted RBP14.6□□□□□ -0.07
SFXN5-219ENST00000488839 MYH4Q9Y623 1939 aa14.6□□□□□ -0.07
SFXN5-219ENST00000488839 TOP1P11387 765 aaKnown RBP14.59□□□□□ -0.07
SFXN5-219ENST00000488839 PDE4AP27815 886 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 SLC1A4P43007 532 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 STAT2P52630 851 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 LRRC47Q8N1G4 583 aaKnown RBP14.59□□□□□ -0.07
SFXN5-219ENST00000488839 ZNF710Q8N1W2 664 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 CHST13Q8NET6 341 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 NPLOC4Q8TAT6 608 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 RUFY2Q8WXA3 655 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 MMP19Q99542 508 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 NUP88Q99567 741 aaPredicted RBP14.59□□□□□ -0.07
SFXN5-219ENST00000488839 NBPF3Q9H094 633 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 FLRT1Q9NZU1 646 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 NR2E3Q9Y5X4 410 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 BRCA2P51587 3418 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 RAD50Q92878 1312 aa14.59□□□□□ -0.07
SFXN5-219ENST00000488839 COBLO75128 1261 aa14.58□□□□□ -0.08
SFXN5-219ENST00000488839 DCAF4Q8WV16 495 aa14.58□□□□□ -0.08
SFXN5-219ENST00000488839 ESR2Q92731 530 aa14.58□□□□□ -0.08
SFXN5-219ENST00000488839 DPF3Q92784 378 aa14.58□□□□□ -0.08
SFXN5-219ENST00000488839 KIFC2Q96AC6 838 aa14.58□□□□□ -0.08
SFXN5-219ENST00000488839 TOMM22Q9NS69 142 aa14.58□□□□□ -0.08
SFXN5-219ENST00000488839 PNMA2Q9UL42 364 aa14.58□□□□□ -0.08
SFXN5-219ENST00000488839 TMEM232C9JQI7 657 aa14.57□□□□□ -0.08
SFXN5-219ENST00000488839 CCND3P30281 292 aaPredicted RBP14.57□□□□□ -0.08
SFXN5-219ENST00000488839 IMMTQ16891 758 aaKnown RBP14.57□□□□□ -0.08
SFXN5-219ENST00000488839 TKFCQ3LXA3 575 aa14.57□□□□□ -0.08
SFXN5-219ENST00000488839 SNRNP48Q6IEG0 339 aaKnown RBP14.57□□□□□ -0.08
SFXN5-219ENST00000488839 DGKHQ86XP1 1220 aa14.57□□□□□ -0.08
SFXN5-219ENST00000488839 PAWRQ96IZ0 340 aaKnown RBP14.57□□□□□ -0.08
SFXN5-219ENST00000488839 MAML3Q96JK9 1138 aa14.57□□□□□ -0.08
SFXN5-219ENST00000488839 INCENPQ9NQS7 918 aa14.57□□□□□ -0.08
SFXN5-219ENST00000488839 DDX20Q9UHI6 824 aaKnown RBP14.57□□□□□ -0.08
SFXN5-219ENST00000488839 TACC3Q9Y6A5 838 aa14.57□□□□□ -0.08
SFXN5-219ENST00000488839 CYBAP13498 195 aa14.56□□□□□ -0.08
SFXN5-219ENST00000488839 MCCP23508 829 aa14.56□□□□□ -0.08
SFXN5-219ENST00000488839 CYP2C19P33261 490 aa14.56□□□□□ -0.08
SFXN5-219ENST00000488839 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
SFXN5-219ENST00000488839 ZNF792Q3KQV3 632 aa14.56□□□□□ -0.08
SFXN5-219ENST00000488839 RRP12Q5JTH9 1297 aaKnown RBP14.56□□□□□ -0.08
SFXN5-219ENST00000488839 BTNL9Q6UXG8 535 aa14.56□□□□□ -0.08
SFXN5-219ENST00000488839 IQCA1Q86XH1 822 aa14.56□□□□□ -0.08
SFXN5-219ENST00000488839 TINF2Q9BSI4 451 aa14.56□□□□□ -0.08
SFXN5-219ENST00000488839 COL11A1P12107 1806 aaPredicted RBP14.55□□□□□ -0.08
SFXN5-219ENST00000488839 DNAJC25-GNG10A0A024R161 153 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 SEPT4O43236 478 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 NMT2O60551 498 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 COL6A1P12109 1028 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 GSPT1P15170 499 aaKnown RBP14.55□□□□□ -0.08
SFXN5-219ENST00000488839 HAND2P61296 217 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 MAMDC4Q6UXC1 1216 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 ARRDC4Q8NCT1 418 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 ANKS1AQ92625 1134 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 DDX11Q96FC9 970 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 TMEM47Q9BQJ4 181 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 KRT23Q9C075 422 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 C11orf49Q9H6J7 331 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 CNNM2Q9H8M5 875 aa14.55□□□□□ -0.08
SFXN5-219ENST00000488839 EVI5O60447 810 aa14.54□□□□□ -0.08
SFXN5-219ENST00000488839 CNGA1P29973 690 aa14.54□□□□□ -0.08
SFXN5-219ENST00000488839 TBC1D10CQ8IV04 446 aa14.54□□□□□ -0.08
SFXN5-219ENST00000488839 CPXCR1Q8N123 301 aa14.54□□□□□ -0.08
SFXN5-219ENST00000488839 RAVER2Q9HCJ3 691 aaKnown RBP14.54□□□□□ -0.08
SFXN5-219ENST00000488839 RIPK3Q9Y572 518 aa14.54□□□□□ -0.08
SFXN5-219ENST00000488839 SYNGAP1Q96PV0 1343 aa14.54□□□□□ -0.08
SFXN5-219ENST00000488839 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
SFXN5-219ENST00000488839 H0YGN5 161 aa14.53□□□□□ -0.08
SFXN5-219ENST00000488839 DNM1LO00429 736 aa14.53□□□□□ -0.08
SFXN5-219ENST00000488839 SNHG28P0DPA3 235 aa14.53□□□□□ -0.08
SFXN5-219ENST00000488839 CHMLP26374 656 aa14.53□□□□□ -0.08
SFXN5-219ENST00000488839 IKQ13123 557 aaPredicted RBP14.53□□□□□ -0.08
SFXN5-219ENST00000488839 GPATCH4Q5T3I0 446 aaKnown RBP14.53□□□□□ -0.08
SFXN5-219ENST00000488839 ANKRD35Q8N283 1001 aa14.53□□□□□ -0.08
SFXN5-219ENST00000488839 TRPV1Q8NER1 839 aa14.53□□□□□ -0.08
SFXN5-219ENST00000488839 MAF1Q9H063 256 aa14.53□□□□□ -0.08
SFXN5-219ENST00000488839 ACAD9Q9H845 621 aa14.53□□□□□ -0.08
SFXN5-219ENST00000488839 PRR12Q9ULL5 1215 aa14.53□□□□□ -0.08
SFXN5-219ENST00000488839 ZNF536O15090 1300 aa14.52□□□□□ -0.08
SFXN5-219ENST00000488839 PGK2P07205 417 aa14.52□□□□□ -0.09
SFXN5-219ENST00000488839 KCTD1Q719H9 257 aa14.52□□□□□ -0.09
SFXN5-219ENST00000488839 CENPQQ7L2Z9 268 aaPredicted RBP14.52□□□□□ -0.09
SFXN5-219ENST00000488839 DIS3LQ8TF46 1054 aaKnown RBP14.52□□□□□ -0.09
SFXN5-219ENST00000488839 RANBP17Q9H2T7 1088 aaKnown RBP14.52□□□□□ -0.09
SFXN5-219ENST00000488839 ISY1Q9ULR0 285 aaKnown RBP14.52□□□□□ -0.09
SFXN5-219ENST00000488839 CNPY2Q9Y2B0 182 aa14.52□□□□□ -0.09
SFXN5-219ENST00000488839 PFASO15067 1338 aa14.51□□□□□ -0.09
SFXN5-219ENST00000488839 LAMA4Q16363 1823 aa14.51□□□□□ -0.09
SFXN5-219ENST00000488839 ICAM1P05362 532 aa14.51□□□□□ -0.09
SFXN5-219ENST00000488839 PDHBP11177 359 aa14.51□□□□□ -0.09
SFXN5-219ENST00000488839 CCDC96Q2M329 555 aa14.51□□□□□ -0.09
SFXN5-219ENST00000488839 SPOCK2Q92563 424 aa14.51□□□□□ -0.09
SFXN5-219ENST00000488839 ZSCAN10Q96SZ4 725 aaPredicted RBP14.51□□□□□ -0.09
SFXN5-219ENST00000488839 ZSWIM5Q9P217 1185 aa14.51□□□□□ -0.09
SFXN5-219ENST00000488839 CIZ1Q9ULV3 898 aaPredicted RBP14.51□□□□□ -0.09
SFXN5-219ENST00000488839 MKI67P46013 3256 aaKnown RBP14.51□□□□□ -0.09
SFXN5-219ENST00000488839 NEDD4P46934 1319 aa14.5□□□□□ -0.09
SFXN5-219ENST00000488839 LOC102724159A0A0B4J2E5 919 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms