RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 SARSP49591 514 aaKnown RBP17.99■□□□□ 0.47
MCF2L-229ENST00000488765 STIM2Q9P246 746 aa17.99■□□□□ 0.47
MCF2L-229ENST00000488765 MYO1AQ9UBC5 1043 aa17.99■□□□□ 0.47
MCF2L-229ENST00000488765 C1orf167Q5SNV9 1468 aa17.99■□□□□ 0.47
MCF2L-229ENST00000488765 A0A1B0GVG6 124 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 TTF1Q15361 905 aaPredicted RBP17.98■□□□□ 0.47
MCF2L-229ENST00000488765 TTLL7Q6ZT98 887 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 LINS1Q8NG48 757 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 OXER1Q8TDS5 423 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 PANK4Q9NVE7 773 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 IARSP41252 1262 aaKnown RBP17.98■□□□□ 0.47
MCF2L-229ENST00000488765 WDR59Q6PJI9 974 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 SPICE1Q8N0Z3 855 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 EHBP1Q8NDI1 1231 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 OR8K1Q8NGG5 319 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 SPAG5Q96R06 1193 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 TRPC6Q9Y210 931 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 TOPAZ1Q8N9V7 1692 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 VAV2P52735 878 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 EPHB4P54760 987 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 ELF3P78545 371 aaPredicted RBP17.98■□□□□ 0.47
MCF2L-229ENST00000488765 PDIA6Q15084 440 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 ZKSCAN3Q9BRR0 538 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 PLAAQ9Y263 795 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 STK38LQ9Y2H1 464 aa17.98■□□□□ 0.47
MCF2L-229ENST00000488765 KCNJ18B7U540 433 aa17.97■□□□□ 0.47
MCF2L-229ENST00000488765 ACTN4O43707 911 aaKnown RBP17.97■□□□□ 0.47
MCF2L-229ENST00000488765 SSR1P43307 286 aaKnown RBP17.97■□□□□ 0.47
MCF2L-229ENST00000488765 KCNJ12Q14500 433 aa17.97■□□□□ 0.47
MCF2L-229ENST00000488765 RBBP5Q15291 538 aaKnown RBP17.97■□□□□ 0.47
MCF2L-229ENST00000488765 HAUS3Q68CZ6 603 aa17.97■□□□□ 0.47
MCF2L-229ENST00000488765 PI16Q6UXB8 463 aa17.97■□□□□ 0.47
MCF2L-229ENST00000488765 DIS3L2Q8IYB7 885 aaKnown RBP17.97■□□□□ 0.47
MCF2L-229ENST00000488765 BIN2Q9UBW5 565 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-229ENST00000488765 PACSIN2Q9UNF0 486 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-229ENST00000488765 GMNCA6NCL1 334 aa17.97■□□□□ 0.47
MCF2L-229ENST00000488765 A8MUI8 341 aa17.97■□□□□ 0.47
MCF2L-229ENST00000488765 SNUPNO95149 360 aaKnown RBP17.97■□□□□ 0.47
MCF2L-229ENST00000488765 SNRPA1P09661 255 aaKnown RBP17.97■□□□□ 0.47
MCF2L-229ENST00000488765 TMC4Q7Z404 712 aa17.97■□□□□ 0.47
MCF2L-229ENST00000488765 ZNF594Q96JF6 807 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-229ENST00000488765 HAUS7Q99871 368 aa17.97■□□□□ 0.47
MCF2L-229ENST00000488765 GDAQ9Y2T3 454 aa17.97■□□□□ 0.47
MCF2L-229ENST00000488765 PPP1R3GB7ZBB8 358 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 TRIM21P19474 475 aaKnown RBP17.96■□□□□ 0.47
MCF2L-229ENST00000488765 C6orf89Q6UWU4 347 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 KDM7AQ6ZMT4 941 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 DDX42Q86XP3 938 aaKnown RBP eCLIP17.96■□□□□ 0.47
MCF2L-229ENST00000488765 KLHL7Q8IXQ5 586 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 CTAGE1Q96RT6 745 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 NWD1Q149M9 1564 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 B4E1Z4 1266 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 HEXIM1O94992 359 aaKnown RBP17.96■□□□□ 0.47
MCF2L-229ENST00000488765 CUL4BQ13620 913 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 ENOX2Q16206 610 aaKnown RBP17.96■□□□□ 0.47
MCF2L-229ENST00000488765 IMMTQ16891 758 aaKnown RBP17.96■□□□□ 0.47
MCF2L-229ENST00000488765 CUL5Q93034 780 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 PLIN2Q99541 437 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 FBXO2Q9UK22 296 aaPredicted RBP17.96■□□□□ 0.47
MCF2L-229ENST00000488765 RANBP6O60518 1105 aaKnown RBP17.96■□□□□ 0.47
MCF2L-229ENST00000488765 SLC8A1P32418 973 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 BRINP3Q76B58 766 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 KIF2BQ8N4N8 673 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 ZNF570Q96NI8 536 aa17.96■□□□□ 0.47
MCF2L-229ENST00000488765 SMIM23A6NLE4 172 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 TMCO5BA8MYB1 307 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 ERCC5P28715 1186 aaPredicted RBP17.95■□□□□ 0.46
MCF2L-229ENST00000488765 KIF5AQ12840 1032 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 CDKAL1Q5VV42 579 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 LMBR1LQ6UX01 489 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 CACNA2D3Q8IZS8 1091 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 AGAP11Q8TF27 550 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 UBAC1Q9BSL1 405 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 NHEJ1Q9H9Q4 299 aaPredicted RBP17.95■□□□□ 0.46
MCF2L-229ENST00000488765 LRRC4CQ9HCJ2 640 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 PTPN12Q05209 780 aaKnown RBP17.95■□□□□ 0.46
MCF2L-229ENST00000488765 ALS2CLQ60I27 953 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 PAGE5Q96GU1 130 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 PIDD1Q9HB75 910 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 BABAM1Q9NWV8 329 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 SLAIN2Q9P270 581 aa17.95■□□□□ 0.46
MCF2L-229ENST00000488765 XRN1Q8IZH2 1706 aaKnown RBP17.95■□□□□ 0.46
MCF2L-229ENST00000488765 NEURL1BA8MQ27 555 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 RANBP1P43487 201 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 GCKRQ14397 625 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 TYW1BQ6NUM6 668 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 SRCAPQ6ZRS2 3230 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 NALCNQ8IZF0 1738 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 ZCRB1Q8TBF4 217 aaKnown RBP17.94■□□□□ 0.46
MCF2L-229ENST00000488765 ATP6V1G3Q96LB4 118 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 KRT12Q99456 494 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 LBHD1Q9BQE6 289 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-229ENST00000488765 RGPD2P0DJD1 1756 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 IFIT1P09914 478 aaKnown RBP17.94■□□□□ 0.46
MCF2L-229ENST00000488765 MAP3K12Q12852 859 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 RRP12Q5JTH9 1297 aaKnown RBP17.94■□□□□ 0.46
MCF2L-229ENST00000488765 CYB5R4Q7L1T6 521 aa17.94■□□□□ 0.46
MCF2L-229ENST00000488765 YTHDF3Q7Z739 585 aaKnown RBP17.94■□□□□ 0.46
MCF2L-229ENST00000488765 SPATS2Q86XZ4 545 aaKnown RBP17.94■□□□□ 0.46
MCF2L-229ENST00000488765 NOSTRINQ8IVI9 506 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms