RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 KIF23Q02241 960 aaPredicted RBP17.43■□□□□ 0.38
CTNS-206ENST00000488623 NPY5RQ15761 445 aa17.43■□□□□ 0.38
CTNS-206ENST00000488623 TREML2Q5T2D2 321 aa17.43■□□□□ 0.38
CTNS-206ENST00000488623 SAMD1Q6SPF0 538 aaPredicted RBP17.43■□□□□ 0.38
CTNS-206ENST00000488623 GADL1Q6ZQY3 521 aa17.43■□□□□ 0.38
CTNS-206ENST00000488623 SAPCD2Q86UD0 394 aa17.43■□□□□ 0.38
CTNS-206ENST00000488623 SLF1Q9BQI6 1058 aa17.43■□□□□ 0.38
CTNS-206ENST00000488623 RANBP17Q9H2T7 1088 aaKnown RBP17.43■□□□□ 0.38
CTNS-206ENST00000488623 WBP1LQ9NX94 342 aa17.43■□□□□ 0.38
CTNS-206ENST00000488623 RLFQ13129 1914 aa17.43■□□□□ 0.38
CTNS-206ENST00000488623 KIF28PB7ZC32 967 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 USP17L15C9J2P7 530 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 USP17L13C9JLJ4 530 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 USP17L11C9JVI0 530 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 USP17L18D6R9N7 530 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 USP17L22D6RA61 530 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 USP17L17D6RBQ6 530 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 USP17L19D6RCP7 530 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 USP17L20D6RJB6 530 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 hCG_1984214I3L0E3 225 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 ADAMTS3O15072 1205 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 FLOT1O75955 427 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 USP17L24Q0WX57 530 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 ZNF713Q8N859 430 aaPredicted RBP17.42■□□□□ 0.38
CTNS-206ENST00000488623 PROCA1Q8NCQ7 364 aaPredicted RBP17.42■□□□□ 0.38
CTNS-206ENST00000488623 OXER1Q8TDS5 423 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 CHAMP1Q96JM3 812 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 PPP1R9AQ9ULJ8 1098 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 PARP14Q460N5 1801 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 SMCHD1A6NHR9 2005 aa17.42■□□□□ 0.38
CTNS-206ENST00000488623 BTBD18B2RXH4 712 aa17.41■□□□□ 0.38
CTNS-206ENST00000488623 DSG3P32926 999 aa17.41■□□□□ 0.38
CTNS-206ENST00000488623 NAPAP54920 295 aa17.41■□□□□ 0.38
CTNS-206ENST00000488623 MAP2K1Q02750 393 aaPredicted RBP17.41■□□□□ 0.38
CTNS-206ENST00000488623 SNAPC2Q13487 334 aa17.41■□□□□ 0.38
CTNS-206ENST00000488623 COG2Q14746 738 aa17.41■□□□□ 0.38
CTNS-206ENST00000488623 SPRYD7Q5W111 196 aa17.41■□□□□ 0.38
CTNS-206ENST00000488623 FAM173BQ6P4H8 233 aa17.41■□□□□ 0.38
CTNS-206ENST00000488623 CCDC174Q6PII3 467 aa17.41■□□□□ 0.38
CTNS-206ENST00000488623 FBXO11Q86XK2 927 aa17.41■□□□□ 0.38
CTNS-206ENST00000488623 DIS3L2Q8IYB7 885 aaKnown RBP17.41■□□□□ 0.38
CTNS-206ENST00000488623 TNS4Q8IZW8 715 aa17.41■□□□□ 0.38
CTNS-206ENST00000488623 FAM177A1Q8N128 213 aaPredicted RBP17.41■□□□□ 0.38
CTNS-206ENST00000488623 ZSCAN16Q9H4T2 348 aaPredicted RBP17.41■□□□□ 0.38
CTNS-206ENST00000488623 LOC285556D6RIA3 1793 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 SMCO2A6NFE2 343 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTNS-206ENST00000488623 HOXA7P31268 230 aaPredicted RBP17.4■□□□□ 0.38
CTNS-206ENST00000488623 CTCFP49711 727 aaPredicted RBP17.4■□□□□ 0.38
CTNS-206ENST00000488623 MKRN3Q13064 507 aaKnown RBP17.4■□□□□ 0.38
CTNS-206ENST00000488623 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTNS-206ENST00000488623 FOXD4L6Q3SYB3 417 aaPredicted RBP17.4■□□□□ 0.38
CTNS-206ENST00000488623 GPAT2Q6NUI2 795 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 FOXD4L3Q6VB84 417 aaPredicted RBP17.4■□□□□ 0.38
CTNS-206ENST00000488623 CLEC17AQ6ZS10 378 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 FASTKD5Q7L8L6 764 aaKnown RBP17.4■□□□□ 0.38
CTNS-206ENST00000488623 CCDC148Q8NFR7 591 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 ATG4CQ96DT6 458 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 MS4A4AQ96JQ5 239 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 AMNQ9BXJ7 453 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 ZMYND12Q9H0C1 365 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 SLC38A10Q9HBR0 1119 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 ADAMTS5Q9UNA0 930 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 PCDHA1Q9Y5I3 950 aa17.4■□□□□ 0.38
CTNS-206ENST00000488623 AOC2O75106 756 aa17.39■□□□□ 0.37
CTNS-206ENST00000488623 BAG4O95429 457 aaKnown RBP17.39■□□□□ 0.37
CTNS-206ENST00000488623 TAL1P17542 331 aaPredicted RBP17.39■□□□□ 0.37
CTNS-206ENST00000488623 CALML3P27482 149 aa17.39■□□□□ 0.37
CTNS-206ENST00000488623 KRT2P35908 639 aa17.39■□□□□ 0.37
CTNS-206ENST00000488623 NR5A1Q13285 461 aa17.39■□□□□ 0.37
CTNS-206ENST00000488623 DAGLBQ8NCG7 672 aa17.39■□□□□ 0.37
CTNS-206ENST00000488623 CCDC12Q8WUD4 166 aaPredicted RBP17.39■□□□□ 0.37
CTNS-206ENST00000488623 TNFRSF25Q93038 417 aa17.39■□□□□ 0.37
CTNS-206ENST00000488623 HHIPL1Q96JK4 782 aa17.39■□□□□ 0.37
CTNS-206ENST00000488623 FOXP1Q9H334 677 aaPredicted RBP17.39■□□□□ 0.37
CTNS-206ENST00000488623 HOXC10Q9NYD6 342 aa17.39■□□□□ 0.37
CTNS-206ENST00000488623 PCDHA4Q9UN74 947 aa17.39■□□□□ 0.37
CTNS-206ENST00000488623 AGTPBP1Q9UPW5 1226 aa17.39■□□□□ 0.37
CTNS-206ENST00000488623 ZNF536O15090 1300 aa17.39■□□□□ 0.37
CTNS-206ENST00000488623 ESYT2A0FGR8 921 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 M0R2N6 131 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 VWA5AO00534 786 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 ZBED4O75132 1171 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 ZBTB48P10074 688 aaPredicted RBP17.38■□□□□ 0.37
CTNS-206ENST00000488623 FDX1P10109 184 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 ZNF157P51786 506 aaPredicted RBP17.38■□□□□ 0.37
CTNS-206ENST00000488623 GTF2A2P52657 109 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 GALNT17Q6IS24 598 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 RGMBQ6NW40 437 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 PPP1R18Q6NYC8 613 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 BLIDQ8IZY5 108 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 REPS2Q8NFH8 660 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 AGBL1Q96MI9 1066 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 C6orf50Q9HD87 102 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 TCHHQ07283 1943 aa17.38■□□□□ 0.37
CTNS-206ENST00000488623 SPDYE16A6NNV3 312 aaPredicted RBP17.37■□□□□ 0.37
CTNS-206ENST00000488623 CETPP11597 493 aa17.37■□□□□ 0.37
CTNS-206ENST00000488623 USH1GQ495M9 461 aa17.37■□□□□ 0.37
CTNS-206ENST00000488623 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
CTNS-206ENST00000488623 EARS2Q5JPH6 523 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms