RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 RIPK3Q9Y572 518 aa13.05□□□□□ -0.32
LCN2-206ENST00000488391 ELP1O95163 1332 aa13.05□□□□□ -0.32
LCN2-206ENST00000488391 BAZ2AQ9UIF9 1905 aaKnown RBP13.05□□□□□ -0.32
LCN2-206ENST00000488391 USP17L12C9JPN9 530 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 USP17L21D6R901 530 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 ARVCFO00192 962 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 ADCY6O43306 1168 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 IFIT2P09913 472 aaKnown RBP13.04□□□□□ -0.32
LCN2-206ENST00000488391 COPB2P35606 906 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 PLA2G5P39877 138 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 ACVR2BQ13705 512 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 C12orf60Q5U649 245 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 SNRNP48Q6IEG0 339 aaKnown RBP13.04□□□□□ -0.32
LCN2-206ENST00000488391 MSL3Q8N5Y2 521 aaKnown RBP13.04□□□□□ -0.32
LCN2-206ENST00000488391 PCSK9Q8NBP7 692 aaKnown RBP13.04□□□□□ -0.32
LCN2-206ENST00000488391 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 NECAB3Q96P71 396 aaPredicted RBP13.04□□□□□ -0.32
LCN2-206ENST00000488391 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
LCN2-206ENST00000488391 CXXC1Q9P0U4 656 aaPredicted RBP13.04□□□□□ -0.32
LCN2-206ENST00000488391 MROH7Q68CQ1 1323 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 SYNGAP1Q96PV0 1343 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 ROBO3Q96MS0 1386 aa13.04□□□□□ -0.32
LCN2-206ENST00000488391 MCM3APO60318 1980 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 MUC3AQ02505 3323 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 DNAJC25-GNG10A0A024R161 153 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 A0A0U1RQG5 324 aaPredicted RBP13.03□□□□□ -0.32
LCN2-206ENST00000488391 ERC2O15083 957 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 TLR3O15455 904 aaKnown RBP13.03□□□□□ -0.32
LCN2-206ENST00000488391 EIF5BO60841 1220 aaKnown RBP13.03□□□□□ -0.32
LCN2-206ENST00000488391 MBD4O95243 580 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 FGBP02675 491 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 CST5P28325 142 aaPredicted RBP13.03□□□□□ -0.32
LCN2-206ENST00000488391 RAB30Q15771 203 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 CCDC144BQ3MJ40 725 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 PSRC1Q6PGN9 363 aaPredicted RBP13.03□□□□□ -0.32
LCN2-206ENST00000488391 MAMDC4Q6UXC1 1216 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 C16orf86Q6ZW13 317 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 FAM126BQ8IXS8 530 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 CPXCR1Q8N123 301 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 HERVK_113Q902F9 699 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 TEX13BQ9BXU2 312 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 SLC28A3Q9HAS3 691 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 SPC25Q9HBM1 224 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 IL23AQ9NPF7 189 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 ATP8A2Q9NTI2 1148 aa13.03□□□□□ -0.32
LCN2-206ENST00000488391 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
LCN2-206ENST00000488391 YBX2Q9Y2T7 364 aaKnown RBP13.03□□□□□ -0.32
LCN2-206ENST00000488391 GSPT1P15170 499 aaKnown RBP13.02□□□□□ -0.33
LCN2-206ENST00000488391 RABGGTBP53611 331 aa13.02□□□□□ -0.33
LCN2-206ENST00000488391 GJA9P57773 515 aa13.02□□□□□ -0.33
LCN2-206ENST00000488391 BEX3Q00994 111 aa13.02□□□□□ -0.33
LCN2-206ENST00000488391 OTOP2Q7RTS6 562 aa13.02□□□□□ -0.33
LCN2-206ENST00000488391 AMOTL1Q8IY63 956 aa13.02□□□□□ -0.33
LCN2-206ENST00000488391 MICALL1Q8N3F8 863 aa13.02□□□□□ -0.33
LCN2-206ENST00000488391 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
LCN2-206ENST00000488391 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
LCN2-206ENST00000488391 ECHDC1Q9NTX5 307 aa13.02□□□□□ -0.33
LCN2-206ENST00000488391 CD4P01730 458 aa13.01□□□□□ -0.33
LCN2-206ENST00000488391 CHGBP05060 677 aa13.01□□□□□ -0.33
LCN2-206ENST00000488391 BMP1P13497 986 aa13.01□□□□□ -0.33
LCN2-206ENST00000488391 CCL23P55773 120 aa13.01□□□□□ -0.33
LCN2-206ENST00000488391 TFF2Q03403 129 aa13.01□□□□□ -0.33
LCN2-206ENST00000488391 STK11IPQ8N1F8 1099 aa13.01□□□□□ -0.33
LCN2-206ENST00000488391 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.01□□□□□ -0.33
LCN2-206ENST00000488391 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
LCN2-206ENST00000488391 ABHD16BQ9H3Z7 469 aa13.01□□□□□ -0.33
LCN2-206ENST00000488391 RAVER2Q9HCJ3 691 aaKnown RBP13.01□□□□□ -0.33
LCN2-206ENST00000488391 CTDP1Q9Y5B0 961 aaPredicted RBP13.01□□□□□ -0.33
LCN2-206ENST00000488391 UMODL1Q5DID0 1318 aa13.01□□□□□ -0.33
LCN2-206ENST00000488391 CHD7Q9P2D1 2997 aa13.01□□□□□ -0.33
LCN2-206ENST00000488391 GBF1Q92538 1859 aa13□□□□□ -0.33
LCN2-206ENST00000488391 F5H6K3 240 aa13□□□□□ -0.33
LCN2-206ENST00000488391 CTAGE5O15320 804 aa13□□□□□ -0.33
LCN2-206ENST00000488391 ZBED4O75132 1171 aa13□□□□□ -0.33
LCN2-206ENST00000488391 CDC45O75419 566 aa13□□□□□ -0.33
LCN2-206ENST00000488391 MYOGP15173 224 aa13□□□□□ -0.33
LCN2-206ENST00000488391 ADD2P35612 726 aa13□□□□□ -0.33
LCN2-206ENST00000488391 KLRC3Q07444 240 aa13□□□□□ -0.33
LCN2-206ENST00000488391 CTR9Q6PD62 1173 aa13□□□□□ -0.33
LCN2-206ENST00000488391 NOL8Q76FK4 1167 aaKnown RBP13□□□□□ -0.33
LCN2-206ENST00000488391 ARMCX2Q7L311 632 aa13□□□□□ -0.33
LCN2-206ENST00000488391 ZNF467Q7Z7K2 595 aaPredicted RBP13□□□□□ -0.33
LCN2-206ENST00000488391 ANKRD35Q8N283 1001 aa13□□□□□ -0.33
LCN2-206ENST00000488391 PRPF38AQ8NAV1 312 aaKnown RBP13□□□□□ -0.33
LCN2-206ENST00000488391 PI4K2BQ8TCG2 481 aa13□□□□□ -0.33
LCN2-206ENST00000488391 DDRGK1Q96HY6 314 aa13□□□□□ -0.33
LCN2-206ENST00000488391 FGD4Q96M96 766 aa13□□□□□ -0.33
LCN2-206ENST00000488391 MTIF3Q9H2K0 278 aaKnown RBP13□□□□□ -0.33
LCN2-206ENST00000488391 BOLA2Q9H3K6 86 aa13□□□□□ -0.33
LCN2-206ENST00000488391 HIPK3Q9H422 1215 aa13□□□□□ -0.33
LCN2-206ENST00000488391 SLC4A4Q9Y6R1 1079 aa13□□□□□ -0.33
LCN2-206ENST00000488391 CNTN2Q02246 1040 aa12.99□□□□□ -0.33
LCN2-206ENST00000488391 SKIV2LQ15477 1246 aaKnown RBP12.99□□□□□ -0.33
LCN2-206ENST00000488391 CXCL17Q6UXB2 119 aa12.99□□□□□ -0.33
LCN2-206ENST00000488391 CCDC144CPQ8IYA2 1237 aa12.99□□□□□ -0.33
LCN2-206ENST00000488391 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.99□□□□□ -0.33
LCN2-206ENST00000488391 KIFC2Q96AC6 838 aa12.99□□□□□ -0.33
LCN2-206ENST00000488391 TRPV6Q9H1D0 765 aa12.99□□□□□ -0.33
LCN2-206ENST00000488391 PAG1Q9NWQ8 432 aa12.99□□□□□ -0.33
LCN2-206ENST00000488391 CLIP2Q9UDT6 1046 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms