RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 HMGB1P09429 215 aaKnown RBP19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 ALAS1P13196 640 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 ELNP15502 786 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 PTPREP23469 700 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 CDC27P30260 824 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 MAPK4P31152 587 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 FGD1P98174 961 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 TRIM32Q13049 653 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 CDC37Q16543 378 aaPredicted RBP19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 CCL14Q16627 93 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 MORN1Q5T089 497 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 NOL8Q76FK4 1167 aaKnown RBP19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 CCAR1Q8IX12 1150 aaKnown RBP19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 SH3TC2Q8TF17 1288 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 PIGSQ96S52 555 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 TEX13BQ9BXU2 312 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 C22orf23Q9BZE7 217 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 PDRG1Q9NUG6 133 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 DOCK3Q8IZD9 2030 aa19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 COBLO75128 1261 aa19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 PGK2P07205 417 aa19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 CCNA1P78396 465 aa19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 QRICH1Q2TAL8 776 aa19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 HOMER1Q86YM7 354 aa19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 NPLOC4Q8TAT6 608 aa19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 USP6NLQ92738 828 aa19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 COA7Q96BR5 231 aa19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 PURBQ96QR8 312 aaKnown RBP19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 AGXT2Q9BYV1 514 aa19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 BACH2Q9BYV9 841 aa19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 CWC22Q9HCG8 908 aaKnown RBP19.98■□□□□ 0.79
SHROOM1-205ENST00000488072 ATP2A1O14983 1001 aa19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 ADD1P35611 737 aaKnown RBP19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 ANAPC15P60006 121 aa19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 USH1GQ495M9 461 aa19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 TMTC2Q8N394 836 aa19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 FANCBQ8NB91 859 aa19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 IL17RAQ96F46 866 aa19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 NCOA5Q9HCD5 579 aaKnown RBP19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 FLRT1Q9NZU1 646 aa19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 CCPG1Q9ULG6 757 aa19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 DDX49Q9Y6V7 483 aaKnown RBP19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 PLXNB2O15031 1838 aa19.97■□□□□ 0.79
SHROOM1-205ENST00000488072 MGAMO43451 1857 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 GOLGA8AA7E2F4 631 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 GOLGA8BA8MQT2 603 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 ZBTB43O43298 467 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 ICAM1P05362 532 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 ADORA2AP29274 412 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 CCT2P78371 535 aaKnown RBP19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 FBXO46Q6PJ61 603 aaPredicted RBP19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 TNS4Q8IZW8 715 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 SHCBP1Q8NEM2 672 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 CTCFLQ8NI51 663 aaPredicted RBP19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 TBC1D5Q92609 795 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 TRERF1Q96PN7 1200 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 RIOX1Q9H6W3 641 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 RNF146Q9NTX7 359 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 SMCHD1A6NHR9 2005 aa19.96■□□□□ 0.79
SHROOM1-205ENST00000488072 NFIBO00712 420 aa19.95■□□□□ 0.78
SHROOM1-205ENST00000488072 AK2P54819 239 aa19.95■□□□□ 0.78
SHROOM1-205ENST00000488072 STK3Q13188 491 aa19.95■□□□□ 0.78
SHROOM1-205ENST00000488072 GRB14Q14449 540 aa19.95■□□□□ 0.78
SHROOM1-205ENST00000488072 TMTC3Q6ZXV5 915 aa19.95■□□□□ 0.78
SHROOM1-205ENST00000488072 RAET1EQ8TD07 263 aa19.95■□□□□ 0.78
SHROOM1-205ENST00000488072 CLEC4DQ8WXI8 215 aa19.95■□□□□ 0.78
SHROOM1-205ENST00000488072 MTMR8Q96EF0 704 aa19.95■□□□□ 0.78
SHROOM1-205ENST00000488072 MMP19Q99542 508 aa19.95■□□□□ 0.78
SHROOM1-205ENST00000488072 MROH8Q9H579 483 aa19.95■□□□□ 0.78
SHROOM1-205ENST00000488072 LARGE1O95461 756 aa19.94■□□□□ 0.78
SHROOM1-205ENST00000488072 SLC25A27O95847 323 aa19.94■□□□□ 0.78
SHROOM1-205ENST00000488072 PDIA3P30101 505 aaKnown RBP19.94■□□□□ 0.78
SHROOM1-205ENST00000488072 NEK4P51957 841 aa19.94■□□□□ 0.78
SHROOM1-205ENST00000488072 OAZ1P54368 228 aa19.94■□□□□ 0.78
SHROOM1-205ENST00000488072 FUT2Q10981 343 aa19.94■□□□□ 0.78
SHROOM1-205ENST00000488072 MAP2K5Q13163 448 aa19.94■□□□□ 0.78
SHROOM1-205ENST00000488072 RTN1Q16799 776 aa19.94■□□□□ 0.78
SHROOM1-205ENST00000488072 NUDT12Q9BQG2 462 aa19.94■□□□□ 0.78
SHROOM1-205ENST00000488072 BAZ2BQ9UIF8 2168 aaKnown RBP19.93■□□□□ 0.78
SHROOM1-205ENST00000488072 SLC15A5A6NIM6 579 aa19.93■□□□□ 0.78
SHROOM1-205ENST00000488072 ADCY3O60266 1144 aa19.93■□□□□ 0.78
SHROOM1-205ENST00000488072 HOXD10P28358 340 aa19.93■□□□□ 0.78
SHROOM1-205ENST00000488072 SYNE3Q6ZMZ3 975 aa19.93■□□□□ 0.78
SHROOM1-205ENST00000488072 FBXL16Q8N461 479 aa19.93■□□□□ 0.78
SHROOM1-205ENST00000488072 TRIB2Q92519 343 aa19.93■□□□□ 0.78
SHROOM1-205ENST00000488072 MAP3K14Q99558 947 aa19.93■□□□□ 0.78
SHROOM1-205ENST00000488072 TPCN1Q9ULQ1 816 aa19.93■□□□□ 0.78
SHROOM1-205ENST00000488072 FCER1AP12319 257 aa19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 RBM25P49756 843 aaKnown RBP19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 METAP2P50579 478 aaKnown RBP eCLIP19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 CNTN2Q02246 1040 aa19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 ARHGEF6Q15052 776 aa19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 MTFR1Q15390 333 aa19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 IFFO2Q5TF58 517 aa19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 NSMFQ6X4W1 530 aa19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 ABHD8Q96I13 439 aa19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 FGD4Q96M96 766 aa19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 A1CFQ9NQ94 594 aaKnown RBP19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 IVNS1ABPQ9Y6Y0 642 aa19.92■□□□□ 0.78
SHROOM1-205ENST00000488072 OPLAHO14841 1288 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms