RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 SYNRGQ9UMZ2 1314 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 PRUNE2Q8WUY3 3088 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 KBTBD13C9JR72 458 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 SNAI1O95863 264 aaPredicted RBP13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 GSPT1P15170 499 aaKnown RBP13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ATN1P54259 1190 aaPredicted RBP13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 RTP1P59025 263 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ARRDC4Q8NCT1 418 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CHST13Q8NET6 341 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 DCAF4Q8WV16 495 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 GBF1Q92538 1859 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 AGBL1Q96MI9 1066 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 TMEM47Q9BQJ4 181 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 TANC1Q9C0D5 1861 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 KATNBL1Q9H079 304 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ACAD9Q9H845 621 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 XPNPEP3Q9NQH7 507 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 RNF146Q9NTX7 359 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 PRR12Q9ULL5 1215 aa13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ISY1Q9ULR0 285 aaKnown RBP13.26□□□□□ -0.29
RAB11FIP3-210ENST00000487899 PGK1P00558 417 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 FDX1P10109 184 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 RARBP10826 455 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 AKR1A1P14550 325 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 SLC4A3P48751 1232 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 SNAP25P60880 206 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 RRP12Q5JTH9 1297 aaKnown RBP13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 AKNAD1Q5T1N1 836 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 FAM133AQ8N9E0 248 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 LRCH3Q96II8 777 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 TOMM22Q9NS69 142 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 FBXO40Q9UH90 709 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 PHF24Q9UPV7 400 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CNPY2Q9Y2B0 182 aa13.25□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CHD9Q3L8U1 2897 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 PDHBP11177 359 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 TOP1P11387 765 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 PCP11498 1178 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ADCYAP1R1P41586 468 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CNTN2Q02246 1040 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 IKQ13123 557 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CCDC96Q2M329 555 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 TRIM60Q495X7 471 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 MUM1L1Q5H9M0 696 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CWC27Q6UX04 472 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 BTNL9Q6UXG8 535 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 SLC39A5Q6ZMH5 540 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ARMCX2Q7L311 632 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ANKRD35Q8N283 1001 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CHURC1Q8WUH1 139 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 DDX11Q96FC9 970 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 RANBP17Q9H2T7 1088 aaKnown RBP13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 DIAPH3Q9NSV4 1193 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 TCP11L1Q9NUJ3 509 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 MTMR7Q9Y216 660 aa13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CTDP1Q9Y5B0 961 aaPredicted RBP13.24□□□□□ -0.29
RAB11FIP3-210ENST00000487899 FRMPD2Q68DX3 1309 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 A0A1W2PQ45 241 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 A0A1W2PQY0 241 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 MYADML2A6NDP7 307 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 SNHG28P0DPA3 235 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 MFAP1P55081 439 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 IRX6P78412 446 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 MDM2Q00987 491 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 C1orf53Q5VUE5 145 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 TTBK2Q6IQ55 1244 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CCDC174Q6PII3 467 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CCDC144CPQ8IYA2 1237 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 TDHQ8IZJ6 230 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 FERMT2Q96AC1 680 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 PDLIM7Q9NR12 457 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ZHX1Q9UKY1 873 aaPredicted RBP13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ATP11BQ9Y2G3 1177 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 DDX49Q9Y6V7 483 aaKnown RBP13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 SCN10AQ9Y5Y9 1956 aa13.23□□□□□ -0.29
RAB11FIP3-210ENST00000487899 SOWAHBA6NEL2 793 aa13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ICAM1P05362 532 aa13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ALAS1P13196 640 aa13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 SLC16A2P36021 539 aa13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 TKFCQ3LXA3 575 aa13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 TTC22Q5TAA0 569 aa13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CCSAPQ6IQ19 270 aaPredicted RBP13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 MFSD6Q6ZSS7 791 aa13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 DSCC1Q9BVC3 393 aa13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CYP39A1Q9NYL5 469 aa13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CCPG1Q9ULG6 757 aa13.22□□□□□ -0.29
RAB11FIP3-210ENST00000487899 HIP1O00291 1037 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 NFIBO00712 420 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CTAGE5O15320 804 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CST5P28325 142 aaPredicted RBP13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ZNF543Q08ER8 600 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ACVR2BQ13705 512 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 CCDC144BQ3MJ40 725 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 LRIT3Q3SXY7 679 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 SYDE2Q5VT97 1194 aa13.21□□□□□ -0.29
RAB11FIP3-210ENST00000487899 RNF180Q86T96 592 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms