RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 ZNF165P49910 485 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 MICALL2Q8IY33 904 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 TMEM39BQ9GZU3 492 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 PGAP2Q9UHJ9 254 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 CNOT7Q9UIV1 285 aaKnown RBP23.18■■□□□ 1.3
PHF1-209ENST00000487667 TMX2Q9Y320 296 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 NDUFB10O96000 172 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 SLURP2P0DP57 97 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 MCM7P33993 719 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 BTNL9Q6UXG8 535 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 CEP57L1Q8IYX8 460 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 CUL5Q93034 780 aa23.18■■□□□ 1.3
PHF1-209ENST00000487667 H7C1D1 291 aa23.17■■□□□ 1.3
PHF1-209ENST00000487667 RAD21O60216 631 aa23.17■■□□□ 1.3
PHF1-209ENST00000487667 CAP2P40123 477 aa23.17■■□□□ 1.3
PHF1-209ENST00000487667 TTBK2Q6IQ55 1244 aa23.17■■□□□ 1.3
PHF1-209ENST00000487667 NEK8Q86SG6 692 aa23.17■■□□□ 1.3
PHF1-209ENST00000487667 NAP1L4Q99733 375 aaKnown RBP23.17■■□□□ 1.3
PHF1-209ENST00000487667 GJA3Q9Y6H8 435 aa23.17■■□□□ 1.3
PHF1-209ENST00000487667 TXLNAP40222 546 aa23.16■■□□□ 1.3
PHF1-209ENST00000487667 RASA3Q14644 834 aa23.16■■□□□ 1.3
PHF1-209ENST00000487667 HS1BP3Q53T59 392 aa23.16■■□□□ 1.3
PHF1-209ENST00000487667 INF2Q27J81 1249 aa23.16■■□□□ 1.3
PHF1-209ENST00000487667 NOM1Q5C9Z4 860 aaKnown RBP23.16■■□□□ 1.3
PHF1-209ENST00000487667 RASGRP4Q8TDF6 673 aa23.16■■□□□ 1.3
PHF1-209ENST00000487667 TUBE1Q9UJT0 475 aa23.16■■□□□ 1.3
PHF1-209ENST00000487667 USP17L10C9JJH3 530 aa23.15■■□□□ 1.3
PHF1-209ENST00000487667 DNAJC25Q9H1X3 360 aa23.15■■□□□ 1.3
PHF1-209ENST00000487667 CBX8Q9HC52 389 aa23.15■■□□□ 1.3
PHF1-209ENST00000487667 ESPNB1AK53 854 aa23.14■■□□□ 1.3
PHF1-209ENST00000487667 POLR2DO15514 142 aaKnown RBP23.14■■□□□ 1.3
PHF1-209ENST00000487667 SLC16A2P36021 539 aa23.14■■□□□ 1.3
PHF1-209ENST00000487667 NLRP12P59046 1061 aa23.14■■□□□ 1.3
PHF1-209ENST00000487667 RRP1BQ14684 758 aaKnown RBP23.14■■□□□ 1.3
PHF1-209ENST00000487667 GPR162Q16538 588 aa23.14■■□□□ 1.3
PHF1-209ENST00000487667 KIF4BQ2VIQ3 1234 aa23.14■■□□□ 1.3
PHF1-209ENST00000487667 LONRF3Q496Y0 759 aa23.14■■□□□ 1.3
PHF1-209ENST00000487667 SYDE2Q5VT97 1194 aa23.14■■□□□ 1.3
PHF1-209ENST00000487667 DTHD1Q6ZMT9 781 aa23.14■■□□□ 1.3
PHF1-209ENST00000487667 C4orf32Q8N8J7 132 aa23.14■■□□□ 1.3
PHF1-209ENST00000487667 COA7Q96BR5 231 aa23.14■■□□□ 1.3
PHF1-209ENST00000487667 BPIFA3Q9BQP9 254 aa23.14■■□□□ 1.3
PHF1-209ENST00000487667 VWA3AA6NCI4 1184 aa23.14■■□□□ 1.29
PHF1-209ENST00000487667 GOLGA6L19H0YKK7 550 aa23.14■■□□□ 1.29
PHF1-209ENST00000487667 PLA2G6O60733 806 aa23.14■■□□□ 1.29
PHF1-209ENST00000487667 CDC37Q16543 378 aaPredicted RBP23.14■■□□□ 1.29
PHF1-209ENST00000487667 APOBEC3FQ8IUX4 373 aaKnown RBP23.14■■□□□ 1.29
PHF1-209ENST00000487667 GPC2Q8N158 579 aa23.14■■□□□ 1.29
PHF1-209ENST00000487667 AMNQ9BXJ7 453 aa23.14■■□□□ 1.29
PHF1-209ENST00000487667 GRIN1Q05586 938 aa23.13■■□□□ 1.29
PHF1-209ENST00000487667 SHROOM1Q2M3G4 852 aaPredicted RBP23.13■■□□□ 1.29
PHF1-209ENST00000487667 QRICH1Q2TAL8 776 aa23.13■■□□□ 1.29
PHF1-209ENST00000487667 CHURC1Q8WUH1 139 aa23.13■■□□□ 1.29
PHF1-209ENST00000487667 SYMPKQ92797 1274 aaKnown RBP23.13■■□□□ 1.29
PHF1-209ENST00000487667 AK8Q96MA6 479 aa23.13■■□□□ 1.29
PHF1-209ENST00000487667 PSTPIP2Q9H939 334 aa23.13■■□□□ 1.29
PHF1-209ENST00000487667 WNT7AO00755 349 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 JAG1P78504 1218 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 IKQ13123 557 aaPredicted RBP23.12■■□□□ 1.29
PHF1-209ENST00000487667 DCAF15Q66K64 600 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 ZNF541Q9H0D2 1346 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 BECN2A8MW95 431 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 TMEM232C9JQI7 657 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 ADAMTS3O15072 1205 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 SLFN14P0C7P3 912 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 STAT2P52630 851 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 SPECC1Q5M775 1068 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 IQUBQ8NA54 791 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 TBCKQ8TEA7 893 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 VCPKMTQ9H867 229 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 BIN2Q9UBW5 565 aaPredicted RBP23.12■■□□□ 1.29
PHF1-209ENST00000487667 PCDHA1Q9Y5I3 950 aa23.12■■□□□ 1.29
PHF1-209ENST00000487667 DICER1Q9UPY3 1922 aaKnown RBP23.11■■□□□ 1.29
PHF1-209ENST00000487667 A0A1W2PRG0 241 aa23.11■■□□□ 1.29
PHF1-209ENST00000487667 POSTNQ15063 836 aa23.11■■□□□ 1.29
PHF1-209ENST00000487667 MIGA2Q7L4E1 593 aa23.11■■□□□ 1.29
PHF1-209ENST00000487667 FAM160B2Q86V87 743 aa23.11■■□□□ 1.29
PHF1-209ENST00000487667 TRIML1Q8N9V2 468 aa23.11■■□□□ 1.29
PHF1-209ENST00000487667 TEPSINQ96N21 525 aa23.11■■□□□ 1.29
PHF1-209ENST00000487667 RNF181Q9P0P0 153 aa23.11■■□□□ 1.29
PHF1-209ENST00000487667 NEMFO60524 1076 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 PPP1R11O60927 126 aaPredicted RBP23.1■■□□□ 1.29
PHF1-209ENST00000487667 SMC2O95347 1197 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 CLK2P49760 499 aaKnown RBP23.1■■□□□ 1.29
PHF1-209ENST00000487667 AP3B2Q13367 1082 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 LETM2Q2VYF4 491 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 JAKMIP3Q5VZ66 844 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 FBXO11Q86XK2 927 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 HACL1Q9UJ83 578 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 PPP2R3BQ9Y5P8 575 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 UTRNP46939 3433 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 SHTN1A0MZ66 631 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 ACTN4O43707 911 aaKnown RBP23.1■■□□□ 1.29
PHF1-209ENST00000487667 CCNT1O60563 726 aaKnown RBP23.1■■□□□ 1.29
PHF1-209ENST00000487667 CTNND1O60716 968 aaKnown RBP23.1■■□□□ 1.29
PHF1-209ENST00000487667 OR52Z1P0C646 297 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 GCFC2P16383 781 aaKnown RBP23.1■■□□□ 1.29
PHF1-209ENST00000487667 MDM2Q00987 491 aaPredicted RBP23.1■■□□□ 1.29
PHF1-209ENST00000487667 NT5DC1Q5TFE4 455 aa23.1■■□□□ 1.29
PHF1-209ENST00000487667 SERTAD1Q9UHV2 236 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms