RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 BEX3Q00994 111 aa10.08□□□□□ -0.8
HOXA9-204ENST00000487384 PSRC1Q6PGN9 363 aaPredicted RBP10.08□□□□□ -0.8
HOXA9-204ENST00000487384 MAMDC4Q6UXC1 1216 aa10.08□□□□□ -0.8
HOXA9-204ENST00000487384 OTOP2Q7RTS6 562 aa10.08□□□□□ -0.8
HOXA9-204ENST00000487384 IFNLR1Q8IU57 520 aaPredicted RBP10.08□□□□□ -0.8
HOXA9-204ENST00000487384 FAM126BQ8IXS8 530 aa10.08□□□□□ -0.8
HOXA9-204ENST00000487384 MSL3Q8N5Y2 521 aaKnown RBP10.08□□□□□ -0.8
HOXA9-204ENST00000487384 PCSK9Q8NBP7 692 aaKnown RBP10.08□□□□□ -0.8
HOXA9-204ENST00000487384 BOLA2Q9H3K6 86 aa10.08□□□□□ -0.8
HOXA9-204ENST00000487384 SPC25Q9HBM1 224 aa10.08□□□□□ -0.8
HOXA9-204ENST00000487384 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.08□□□□□ -0.8
HOXA9-204ENST00000487384 YBX2Q9Y2T7 364 aaKnown RBP10.08□□□□□ -0.8
HOXA9-204ENST00000487384 SLC4A4Q9Y6R1 1079 aa10.08□□□□□ -0.8
HOXA9-204ENST00000487384 UMODL1Q5DID0 1318 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 DNAJC25-GNG10A0A024R161 153 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 TLR3O15455 904 aaKnown RBP10.07□□□□□ -0.8
HOXA9-204ENST00000487384 PTGS1P23219 599 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 CST5P28325 142 aaPredicted RBP10.07□□□□□ -0.8
HOXA9-204ENST00000487384 RABGGTBP53611 331 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 CCL23P55773 120 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 GJA9P57773 515 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 TFF2Q03403 129 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 RAB30Q15771 203 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 CTR9Q6PD62 1173 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 NOL8Q76FK4 1167 aaKnown RBP10.07□□□□□ -0.8
HOXA9-204ENST00000487384 ANKRD35Q8N283 1001 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 CLASRPQ8N2M8 674 aaKnown RBP10.07□□□□□ -0.8
HOXA9-204ENST00000487384 KIFC2Q96AC6 838 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 DDRGK1Q96HY6 314 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.07□□□□□ -0.8
HOXA9-204ENST00000487384 SLC28A3Q9HAS3 691 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 RAVER2Q9HCJ3 691 aaKnown RBP10.07□□□□□ -0.8
HOXA9-204ENST00000487384 IL23AQ9NPF7 189 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 HOMER2Q9NSB8 354 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 PAG1Q9NWQ8 432 aa10.07□□□□□ -0.8
HOXA9-204ENST00000487384 CTDP1Q9Y5B0 961 aaPredicted RBP10.07□□□□□ -0.8
HOXA9-204ENST00000487384 TRIP12Q14669 1992 aaPredicted RBP10.06□□□□□ -0.8
HOXA9-204ENST00000487384 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.06□□□□□ -0.8
HOXA9-204ENST00000487384 F5H6K3 240 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 CTAGE5O15320 804 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 ZBED4O75132 1171 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 NDUFB10O96000 172 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 FGBP02675 491 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 MYOGP15173 224 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 PLA2G5P39877 138 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 KLRC3Q07444 240 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 HSP90AB4PQ58FF6 505 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 CXCL17Q6UXB2 119 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 ARMCX2Q7L311 632 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 CCDC144CPQ8IYA2 1237 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 PRPF38AQ8NAV1 312 aaKnown RBP10.06□□□□□ -0.8
HOXA9-204ENST00000487384 PANK1Q8TE04 598 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.06□□□□□ -0.8
HOXA9-204ENST00000487384 HERVK_113Q902F9 699 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 CHMP4CQ96CF2 233 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 FAM122AQ96E09 287 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 FGD4Q96M96 766 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 UPF3AQ9H1J1 476 aaKnown RBP10.06□□□□□ -0.8
HOXA9-204ENST00000487384 ABHD16BQ9H3Z7 469 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 HIPK3Q9H422 1215 aa10.06□□□□□ -0.8
HOXA9-204ENST00000487384 DDX49Q9Y6V7 483 aaKnown RBP10.06□□□□□ -0.8
HOXA9-204ENST00000487384 CD4P01730 458 aa10.05□□□□□ -0.8
HOXA9-204ENST00000487384 RASA1P20936 1047 aa10.05□□□□□ -0.8
HOXA9-204ENST00000487384 CNTN2Q02246 1040 aa10.05□□□□□ -0.8
HOXA9-204ENST00000487384 SKIV2LQ15477 1246 aaKnown RBP10.05□□□□□ -0.8
HOXA9-204ENST00000487384 PPP2R2DQ66LE6 453 aa10.05□□□□□ -0.8
HOXA9-204ENST00000487384 ZNF467Q7Z7K2 595 aaPredicted RBP10.05□□□□□ -0.8
HOXA9-204ENST00000487384 TET1Q8NFU7 2136 aa10.05□□□□□ -0.8
HOXA9-204ENST00000487384 KIF1BPQ96EK5 621 aa10.05□□□□□ -0.8
HOXA9-204ENST00000487384 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.05□□□□□ -0.8
HOXA9-204ENST00000487384 PUS7LQ9H0K6 701 aaKnown RBP10.05□□□□□ -0.8
HOXA9-204ENST00000487384 TRPV6Q9H1D0 765 aa10.05□□□□□ -0.8
HOXA9-204ENST00000487384 MTIF3Q9H2K0 278 aaKnown RBP10.05□□□□□ -0.8
HOXA9-204ENST00000487384 MKNK2Q9HBH9 465 aa10.05□□□□□ -0.8
HOXA9-204ENST00000487384 CLIP2Q9UDT6 1046 aa10.05□□□□□ -0.8
HOXA9-204ENST00000487384 ISY1Q9ULR0 285 aaKnown RBP10.05□□□□□ -0.8
HOXA9-204ENST00000487384 ASTN1O14525 1302 aa10.05□□□□□ -0.8
HOXA9-204ENST00000487384 LRRC37A2A6NM11 1700 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 LCTP09848 1927 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 ZBBXA8MT70 800 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 MINDY4BA8MYZ0 360 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 RFXAPO00287 272 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 KCNQ1P51787 676 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 TNFAIP2Q03169 654 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 SCLYQ96I15 445 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 KATNBL1Q9H079 304 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 TSPYL2Q9H2G4 693 aaPredicted RBP10.04□□□□□ -0.8
HOXA9-204ENST00000487384 CERS4Q9HA82 394 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 SLC38A10Q9HBR0 1119 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 SLC4A7Q9Y6M7 1214 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 MUC6Q6W4X9 2439 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 GRIN2DO15399 1336 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 ZBED9Q6R2W3 1325 aa10.04□□□□□ -0.8
HOXA9-204ENST00000487384 ATP2A1O14983 1001 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 DYNC1LI2O43237 492 aaPredicted RBP10.03□□□□□ -0.8
HOXA9-204ENST00000487384 B4GALT4O60513 344 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 PRDM1O75626 825 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 BMP1P13497 986 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 PSMC6P62333 389 aa10.03□□□□□ -0.8
HOXA9-204ENST00000487384 ITGA7Q13683 1181 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms