RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PPP1R18Q6NYC8 613 aa23.09■■□□□ 1.29
HPS3-206ENST00000486530 RSBN1LQ6PCB5 846 aaPredicted RBP23.09■■□□□ 1.29
HPS3-206ENST00000486530 CACTINQ8WUQ7 758 aaKnown RBP23.09■■□□□ 1.29
HPS3-206ENST00000486530 TRIM34Q9BYJ4 488 aa23.09■■□□□ 1.29
HPS3-206ENST00000486530 CBFA2T2O43439 604 aa23.09■■□□□ 1.29
HPS3-206ENST00000486530 RAD17O75943 681 aa23.09■■□□□ 1.29
HPS3-206ENST00000486530 TERF1P54274 439 aa23.09■■□□□ 1.29
HPS3-206ENST00000486530 LRRC8AQ8IWT6 810 aa23.09■■□□□ 1.29
HPS3-206ENST00000486530 ZSCAN29Q8IWY8 852 aaPredicted RBP23.09■■□□□ 1.29
HPS3-206ENST00000486530 REXO1Q8N1G1 1221 aaKnown RBP23.09■■□□□ 1.29
HPS3-206ENST00000486530 C17orf53Q8N3J3 647 aaPredicted RBP23.09■■□□□ 1.29
HPS3-206ENST00000486530 GMLQ99445 158 aa23.09■■□□□ 1.29
HPS3-206ENST00000486530 GPCPD1Q9NPB8 672 aa23.09■■□□□ 1.29
HPS3-206ENST00000486530 ATRNL1Q5VV63 1379 aa23.08■■□□□ 1.29
HPS3-206ENST00000486530 PSMD14O00487 310 aa23.08■■□□□ 1.29
HPS3-206ENST00000486530 DHX8Q14562 1220 aaKnown RBP23.08■■□□□ 1.29
HPS3-206ENST00000486530 CERKLQ49MI3 558 aaPredicted RBP23.08■■□□□ 1.29
HPS3-206ENST00000486530 PDXDC2PQ6P474 469 aa23.08■■□□□ 1.29
HPS3-206ENST00000486530 SH3BP5LQ7L8J4 393 aa23.08■■□□□ 1.29
HPS3-206ENST00000486530 NEK8Q86SG6 692 aa23.08■■□□□ 1.29
HPS3-206ENST00000486530 ENOX1Q8TC92 643 aaKnown RBP23.08■■□□□ 1.29
HPS3-206ENST00000486530 ENTPD3O75355 529 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 ATP1A3P13637 1013 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 ERCC5P28715 1186 aaPredicted RBP23.07■■□□□ 1.28
HPS3-206ENST00000486530 CFAP100Q494V2 611 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 FILIP1Q7Z7B0 1213 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 TMEM60Q9H2L4 133 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 CD2APQ9Y5K6 639 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 PNMA6FA0A0J9YX94 578 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 ADCY7P51828 1080 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 ATP2B2Q01814 1243 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 CCDC96Q2M329 555 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 TATDN1Q6P1N9 297 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 KANSL2Q9H9L4 492 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 JMJD4Q9H9V9 463 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 NYAP2Q9P242 653 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 ZNRF3Q9ULT6 936 aa23.07■■□□□ 1.28
HPS3-206ENST00000486530 GOLGB1Q14789 3259 aaKnown RBP23.06■■□□□ 1.28
HPS3-206ENST00000486530 SERPINC1P01008 464 aa23.06■■□□□ 1.28
HPS3-206ENST00000486530 PTGER2P43116 358 aa23.06■■□□□ 1.28
HPS3-206ENST00000486530 ADGRF4Q8IZF3 695 aa23.06■■□□□ 1.28
HPS3-206ENST00000486530 MKL1Q969V6 931 aa23.06■■□□□ 1.28
HPS3-206ENST00000486530 PRMT6Q96LA8 375 aaPredicted RBP23.06■■□□□ 1.28
HPS3-206ENST00000486530 FANCLQ9NW38 375 aa23.06■■□□□ 1.28
HPS3-206ENST00000486530 GTPBP6O43824 516 aaPredicted RBP23.05■■□□□ 1.28
HPS3-206ENST00000486530 OR52Z1P0C646 297 aa23.05■■□□□ 1.28
HPS3-206ENST00000486530 FMR1Q06787 632 aaKnown RBP eCLIP23.05■■□□□ 1.282e-10■■■■■ 37.1
HPS3-206ENST00000486530 LETM2Q2VYF4 491 aa23.05■■□□□ 1.28
HPS3-206ENST00000486530 DNTTIP2Q5QJE6 756 aaKnown RBP23.05■■□□□ 1.28
HPS3-206ENST00000486530 TDRD3Q9H7E2 651 aaKnown RBP23.05■■□□□ 1.28
HPS3-206ENST00000486530 DISC1Q9NRI5 854 aa23.05■■□□□ 1.28
HPS3-206ENST00000486530 CCNT1O60563 726 aaKnown RBP23.05■■□□□ 1.28
HPS3-206ENST00000486530 STAT6P42226 847 aa23.05■■□□□ 1.28
HPS3-206ENST00000486530 UBASH3AP57075 661 aa23.05■■□□□ 1.28
HPS3-206ENST00000486530 TMEM179Q6ZVK1 233 aa23.05■■□□□ 1.28
HPS3-206ENST00000486530 NIM1KQ8IY84 436 aa23.05■■□□□ 1.28
HPS3-206ENST00000486530 DCAF4Q8WV16 495 aa23.05■■□□□ 1.28
HPS3-206ENST00000486530 CCSER1Q9C0I3 900 aa23.05■■□□□ 1.28
HPS3-206ENST00000486530 R3HCC1Q9Y3T6 440 aaKnown RBP23.05■■□□□ 1.28
HPS3-206ENST00000486530 FAM196BA6NMK8 535 aa23.04■■□□□ 1.28
HPS3-206ENST00000486530 SLURP2P0DP57 97 aa23.04■■□□□ 1.28
HPS3-206ENST00000486530 TMC6Q7Z403 805 aa23.04■■□□□ 1.28
HPS3-206ENST00000486530 CCDC150Q8NCX0 1101 aa23.04■■□□□ 1.28
HPS3-206ENST00000486530 TBCKQ8TEA7 893 aa23.04■■□□□ 1.28
HPS3-206ENST00000486530 COA7Q96BR5 231 aa23.04■■□□□ 1.28
HPS3-206ENST00000486530 MTMR8Q96EF0 704 aa23.04■■□□□ 1.28
HPS3-206ENST00000486530 AK8Q96MA6 479 aa23.04■■□□□ 1.28
HPS3-206ENST00000486530 BIN2Q9UBW5 565 aaPredicted RBP23.04■■□□□ 1.28
HPS3-206ENST00000486530 NFE2L3Q9Y4A8 694 aa23.04■■□□□ 1.28
HPS3-206ENST00000486530 BRCA1P38398 1863 aaKnown RBP23.03■■□□□ 1.28
HPS3-206ENST00000486530 EEF2P13639 858 aaKnown RBP23.03■■□□□ 1.28
HPS3-206ENST00000486530 JAKMIP3Q5VZ66 844 aa23.03■■□□□ 1.28
HPS3-206ENST00000486530 TTBK2Q6IQ55 1244 aa23.03■■□□□ 1.28
HPS3-206ENST00000486530 ZBTB5O15062 677 aa23.02■■□□□ 1.28
HPS3-206ENST00000486530 ZNF18P17022 549 aa23.02■■□□□ 1.28
HPS3-206ENST00000486530 CASP1P29466 404 aa23.02■■□□□ 1.28
HPS3-206ENST00000486530 UBA7P41226 1012 aa23.02■■□□□ 1.28
HPS3-206ENST00000486530 KARSQ15046 597 aaKnown RBP23.02■■□□□ 1.28
HPS3-206ENST00000486530 TAOK3Q9H2K8 898 aa23.02■■□□□ 1.28
HPS3-206ENST00000486530 RIC8AQ9NPQ8 531 aa23.02■■□□□ 1.28
HPS3-206ENST00000486530 ZBTB12Q9Y330 459 aaPredicted RBP23.02■■□□□ 1.28
HPS3-206ENST00000486530 ICA1Q05084 483 aa23.02■■□□□ 1.28
HPS3-206ENST00000486530 ARID5BQ14865 1188 aa23.02■■□□□ 1.28
HPS3-206ENST00000486530 KCTD1Q719H9 257 aa23.02■■□□□ 1.28
HPS3-206ENST00000486530 RMND1Q9NWS8 449 aa23.02■■□□□ 1.28
HPS3-206ENST00000486530 TMOD2Q9NZR1 351 aa23.02■■□□□ 1.28
HPS3-206ENST00000486530 NFKBIEO00221 500 aa23.01■■□□□ 1.27
HPS3-206ENST00000486530 RRAGBQ5VZM2 374 aa23.01■■□□□ 1.27
HPS3-206ENST00000486530 RASSF8Q8NHQ8 419 aa23.01■■□□□ 1.27
HPS3-206ENST00000486530 MTRQ99707 1265 aa23.01■■□□□ 1.27
HPS3-206ENST00000486530 TMEM260Q9NX78 707 aa23.01■■□□□ 1.27
HPS3-206ENST00000486530 SYNRGQ9UMZ2 1314 aa23.01■■□□□ 1.27
HPS3-206ENST00000486530 PPP1R11O60927 126 aaPredicted RBP23■■□□□ 1.27
HPS3-206ENST00000486530 TPM2P07951 284 aa23■■□□□ 1.27
HPS3-206ENST00000486530 CDC25AP30304 524 aa23■■□□□ 1.27
HPS3-206ENST00000486530 CCZ1BP86790 482 aa23■■□□□ 1.27
HPS3-206ENST00000486530 CCZ1P86791 482 aaPredicted RBP23■■□□□ 1.27
HPS3-206ENST00000486530 CXCL9Q07325 125 aa23■■□□□ 1.27
HPS3-206ENST00000486530 CUL4BQ13620 913 aa23■■□□□ 1.27
HPS3-206ENST00000486530 ABCB5Q2M3G0 1257 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms