RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 FAM83AQ86UY5 434 aa13.57□□□□□ -0.24
PKP4-213ENST00000486254 ADGRF4Q8IZF3 695 aa13.57□□□□□ -0.24
PKP4-213ENST00000486254 FAM151AQ8WW52 585 aa13.57□□□□□ -0.24
PKP4-213ENST00000486254 PAGE5Q96GU1 130 aa13.57□□□□□ -0.24
PKP4-213ENST00000486254 HSD3B7Q9H2F3 369 aa13.57□□□□□ -0.24
PKP4-213ENST00000486254 PIM2Q9P1W9 311 aa13.57□□□□□ -0.24
PKP4-213ENST00000486254 LTBP3Q9NS15 1303 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 ADAMTS3O15072 1205 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 CBFA2T2O43439 604 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 SLC26A4O43511 780 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 GTPBP6O43824 516 aaPredicted RBP13.56□□□□□ -0.24
PKP4-213ENST00000486254 OR52Z1P0C646 297 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 GCFC2P16383 781 aaKnown RBP13.56□□□□□ -0.24
PKP4-213ENST00000486254 BMP6P22004 513 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 HOXA7P31268 230 aaPredicted RBP13.56□□□□□ -0.24
PKP4-213ENST00000486254 CLK2P49760 499 aaKnown RBP13.56□□□□□ -0.24
PKP4-213ENST00000486254 ICA1Q05084 483 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 TRAF1Q13077 416 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 IL17AQ16552 155 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 ABCB5Q2M3G0 1257 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 BTNL9Q6UXG8 535 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 RASGRP2Q7LDG7 609 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 HOMER1Q86YM7 354 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 NIM1KQ8IY84 436 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 KIAA1524Q8TCG1 905 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 RASGRP4Q8TDF6 673 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 DHX58Q96C10 678 aa13.56□□□□□ -0.24
PKP4-213ENST00000486254 ZBED3Q96IU2 234 aaPredicted RBP13.56□□□□□ -0.24
PKP4-213ENST00000486254 PRMT6Q96LA8 375 aaPredicted RBP13.56□□□□□ -0.24
PKP4-213ENST00000486254 PSMD14O00487 310 aa13.55□□□□□ -0.24
PKP4-213ENST00000486254 MPHOSPH10O00566 681 aaKnown RBP13.55□□□□□ -0.24
PKP4-213ENST00000486254 EEF2P13639 858 aaKnown RBP13.55□□□□□ -0.24
PKP4-213ENST00000486254 MRPL12P52815 198 aaKnown RBP13.55□□□□□ -0.24
PKP4-213ENST00000486254 TCP10Q12799 353 aa13.55□□□□□ -0.24
PKP4-213ENST00000486254 DLGAP5Q15398 846 aa13.55□□□□□ -0.24
PKP4-213ENST00000486254 PPP4R3AQ6IN85 833 aa13.55□□□□□ -0.24
PKP4-213ENST00000486254 ZSCAN29Q8IWY8 852 aaPredicted RBP13.55□□□□□ -0.24
PKP4-213ENST00000486254 PDILTQ8N807 584 aa13.55□□□□□ -0.24
PKP4-213ENST00000486254 CUL5Q93034 780 aa13.55□□□□□ -0.24
PKP4-213ENST00000486254 PDGFDQ9GZP0 370 aaPredicted RBP13.55□□□□□ -0.24
PKP4-213ENST00000486254 UBA5Q9GZZ9 404 aa13.55□□□□□ -0.24
PKP4-213ENST00000486254 MTFR1LQ9H019 292 aa13.55□□□□□ -0.24
PKP4-213ENST00000486254 KCNF1Q9H3M0 494 aa13.55□□□□□ -0.24
PKP4-213ENST00000486254 TDRD3Q9H7E2 651 aaKnown RBP13.55□□□□□ -0.24
PKP4-213ENST00000486254 DISC1Q9NRI5 854 aa13.55□□□□□ -0.24
PKP4-213ENST00000486254 RMND1Q9NWS8 449 aa13.55□□□□□ -0.24
PKP4-213ENST00000486254 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
PKP4-213ENST00000486254 FRMPD2Q68DX3 1309 aaPredicted RBP13.55□□□□□ -0.24
PKP4-213ENST00000486254 A0A087WWV3 80 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 FOXN1O15353 648 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 ZNF18P17022 549 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 SLC1A4P43007 532 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 KCNJ6P48051 423 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 CACNB3P54284 484 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 MAP3K10Q02779 954 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 CCDC96Q2M329 555 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 MOXD1Q6UVY6 613 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 CSRNP1Q96S65 589 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 CPVLQ9H3G5 476 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 TTC12Q9H892 705 aaPredicted RBP13.54□□□□□ -0.24
PKP4-213ENST00000486254 MTMR7Q9Y216 660 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 PCDHAC2Q9Y5I4 1007 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 RPS12P25398 132 aaKnown RBP13.54□□□□□ -0.24
PKP4-213ENST00000486254 POLD1P28340 1107 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 FXR2P51116 673 aaKnown RBP eCLIP13.54□□□□□ -0.244e-7■□□□□ 11.1
PKP4-213ENST00000486254 EIF6P56537 245 aaKnown RBP13.54□□□□□ -0.24
PKP4-213ENST00000486254 AP3B2Q13367 1082 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 KCNB1Q14721 858 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 RBM26Q5T8P6 1007 aaKnown RBP13.54□□□□□ -0.24
PKP4-213ENST00000486254 SLFN13Q68D06 897 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 CCDC186Q7Z3E2 898 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 CLEC10AQ8IUN9 316 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 SIAH1Q8IUQ4 282 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 IGSF22Q8N9C0 903 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 SPC24Q8NBT2 197 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 CCDC150Q8NCX0 1101 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 TBCKQ8TEA7 893 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 MTMR9Q96QG7 549 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 TMEM60Q9H2L4 133 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 GPCPD1Q9NPB8 672 aa13.54□□□□□ -0.24
PKP4-213ENST00000486254 ZNF70Q9UC06 446 aaPredicted RBP13.54□□□□□ -0.24
PKP4-213ENST00000486254 PLA2G6O60733 806 aa13.53□□□□□ -0.24
PKP4-213ENST00000486254 PTGS1P23219 599 aa13.53□□□□□ -0.24
PKP4-213ENST00000486254 UBA7P41226 1012 aa13.53□□□□□ -0.24
PKP4-213ENST00000486254 FANCCQ00597 558 aa13.53□□□□□ -0.24
PKP4-213ENST00000486254 SEPT2Q15019 361 aa13.53□□□□□ -0.24
PKP4-213ENST00000486254 DALRD3Q5D0E6 543 aaKnown RBP13.53□□□□□ -0.24
PKP4-213ENST00000486254 RAB34Q9BZG1 259 aa13.53□□□□□ -0.24
PKP4-213ENST00000486254 TAOK3Q9H2K8 898 aa13.53□□□□□ -0.24
PKP4-213ENST00000486254 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
PKP4-213ENST00000486254 KCND1Q9NSA2 647 aa13.53□□□□□ -0.24
PKP4-213ENST00000486254 GINM1Q9NU53 330 aa13.53□□□□□ -0.24
PKP4-213ENST00000486254 KBTBD4Q9NVX7 518 aa13.53□□□□□ -0.24
PKP4-213ENST00000486254 CNTNAP1P78357 1384 aa13.53□□□□□ -0.24
PKP4-213ENST00000486254 F5H6K3 240 aa13.52□□□□□ -0.25
PKP4-213ENST00000486254 PPP1R11O60927 126 aaPredicted RBP13.52□□□□□ -0.25
PKP4-213ENST00000486254 STAT6P42226 847 aa13.52□□□□□ -0.25
PKP4-213ENST00000486254 KLRC3Q07444 240 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms