RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 C16orf59Q7L2K0 433 aa20.87■□□□□ 0.93
MCF2L-226ENST00000486210 CNPY2Q9Y2B0 182 aa20.87■□□□□ 0.93
MCF2L-226ENST00000486210 MOXD2PA6NHM9 499 aa20.86■□□□□ 0.93
MCF2L-226ENST00000486210 DCDC2CA8MYV0 355 aa20.86■□□□□ 0.93
MCF2L-226ENST00000486210 VPS53Q5VIR6 699 aa20.86■□□□□ 0.93
MCF2L-226ENST00000486210 TIFAQ96CG3 184 aa20.86■□□□□ 0.93
MCF2L-226ENST00000486210 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.86■□□□□ 0.93
MCF2L-226ENST00000486210 KANSL2Q9H9L4 492 aa20.86■□□□□ 0.93
MCF2L-226ENST00000486210 FOXP2O15409 715 aa20.85■□□□□ 0.93
MCF2L-226ENST00000486210 ADCY6O43306 1168 aa20.85■□□□□ 0.93
MCF2L-226ENST00000486210 PBX2P40425 430 aa20.85■□□□□ 0.93
MCF2L-226ENST00000486210 RASIP1Q5U651 963 aa20.85■□□□□ 0.93
MCF2L-226ENST00000486210 MAMDC4Q6UXC1 1216 aa20.85■□□□□ 0.93
MCF2L-226ENST00000486210 MSL3Q8N5Y2 521 aaKnown RBP20.85■□□□□ 0.93
MCF2L-226ENST00000486210 NUP133Q8WUM0 1156 aa20.85■□□□□ 0.93
MCF2L-226ENST00000486210 ARPP21Q9UBL0 812 aaPredicted RBP20.85■□□□□ 0.93
MCF2L-226ENST00000486210 FAM184BQ9ULE4 1060 aa20.85■□□□□ 0.93
MCF2L-226ENST00000486210 RIPK3Q9Y572 518 aa20.85■□□□□ 0.93
MCF2L-226ENST00000486210 GBF1Q92538 1859 aa20.85■□□□□ 0.93
MCF2L-226ENST00000486210 CCDC171Q6TFL3 1326 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 SYNGAP1Q96PV0 1343 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 DNAJC25-GNG10A0A024R161 153 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 GSG1L2A8MUP6 293 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 GRXCR1A8MXD5 290 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 SGSM2O43147 1006 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 COPB2P35606 906 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 CDK7P50613 346 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 TMEM240Q5SV17 173 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 MFSD5Q6N075 450 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 NUP88Q99567 741 aaPredicted RBP20.84■□□□□ 0.93
MCF2L-226ENST00000486210 ESYT1Q9BSJ8 1104 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 PBX4Q9BYU1 374 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 EPB41L4AQ9HCS5 686 aaPredicted RBP20.84■□□□□ 0.93
MCF2L-226ENST00000486210 GOPCQ9HD26 462 aa20.84■□□□□ 0.93
MCF2L-226ENST00000486210 ZHX1Q9UKY1 873 aaPredicted RBP20.84■□□□□ 0.93
MCF2L-226ENST00000486210 TNFRSF10AO00220 468 aa20.83■□□□□ 0.93
MCF2L-226ENST00000486210 RAD21O60216 631 aa20.83■□□□□ 0.93
MCF2L-226ENST00000486210 CST5P28325 142 aaPredicted RBP20.83■□□□□ 0.93
MCF2L-226ENST00000486210 CTR9Q6PD62 1173 aa20.83■□□□□ 0.93
MCF2L-226ENST00000486210 RUFY2Q8WXA3 655 aa20.83■□□□□ 0.93
MCF2L-226ENST00000486210 MYH4Q9Y623 1939 aa20.82■□□□□ 0.92
MCF2L-226ENST00000486210 ELP1O95163 1332 aa20.82■□□□□ 0.92
MCF2L-226ENST00000486210 RAD50Q92878 1312 aa20.82■□□□□ 0.92
MCF2L-226ENST00000486210 PATL2C9JE40 543 aaKnown RBP20.82■□□□□ 0.92
MCF2L-226ENST00000486210 DUSP11O75319 330 aaKnown RBP20.82■□□□□ 0.92
MCF2L-226ENST00000486210 CSF2RAP15509 400 aa20.82■□□□□ 0.92
MCF2L-226ENST00000486210 SNRNP48Q6IEG0 339 aaKnown RBP20.82■□□□□ 0.92
MCF2L-226ENST00000486210 FGD4Q96M96 766 aa20.82■□□□□ 0.92
MCF2L-226ENST00000486210 SLF1Q9BQI6 1058 aa20.82■□□□□ 0.92
MCF2L-226ENST00000486210 TEX13BQ9BXU2 312 aa20.82■□□□□ 0.92
MCF2L-226ENST00000486210 MYO9BQ13459 2157 aa20.81■□□□□ 0.92
MCF2L-226ENST00000486210 ASGR1P07306 291 aa20.81■□□□□ 0.92
MCF2L-226ENST00000486210 HSPD1P10809 573 aaKnown RBP20.81■□□□□ 0.92
MCF2L-226ENST00000486210 GNAT2P19087 354 aa20.81■□□□□ 0.92
MCF2L-226ENST00000486210 COL9A1P20849 921 aa20.81■□□□□ 0.92
MCF2L-226ENST00000486210 PPIGQ13427 754 aaKnown RBP eCLIP20.81■□□□□ 0.921e-8■■□□□ 14
MCF2L-226ENST00000486210 PPM1EQ8WY54 764 aa20.81■□□□□ 0.92
MCF2L-226ENST00000486210 DDX11Q96FC9 970 aa20.81■□□□□ 0.92
MCF2L-226ENST00000486210 GLT1D1Q96MS3 346 aa20.81■□□□□ 0.92
MCF2L-226ENST00000486210 PRDM12Q9H4Q4 367 aa20.81■□□□□ 0.92
MCF2L-226ENST00000486210 MROH7Q68CQ1 1323 aa20.8■□□□□ 0.92
MCF2L-226ENST00000486210 APPP05067 770 aa20.8■□□□□ 0.92
MCF2L-226ENST00000486210 C6orf222P0C671 652 aaPredicted RBP20.8■□□□□ 0.92
MCF2L-226ENST00000486210 ACRP10323 421 aa20.8■□□□□ 0.92
MCF2L-226ENST00000486210 ACVR2BQ13705 512 aa20.8■□□□□ 0.92
MCF2L-226ENST00000486210 ZNF365Q70YC5 407 aa20.8■□□□□ 0.92
MCF2L-226ENST00000486210 ZNF467Q7Z7K2 595 aaPredicted RBP20.8■□□□□ 0.92
MCF2L-226ENST00000486210 FAM126BQ8IXS8 530 aa20.8■□□□□ 0.92
MCF2L-226ENST00000486210 IFNL3Q8IZI9 196 aa20.8■□□□□ 0.92
MCF2L-226ENST00000486210 UPF3AQ9H1J1 476 aaKnown RBP20.8■□□□□ 0.92
MCF2L-226ENST00000486210 MKNK2Q9HBH9 465 aa20.8■□□□□ 0.92
MCF2L-226ENST00000486210 ZNF287Q9HBT7 754 aa20.8■□□□□ 0.92
MCF2L-226ENST00000486210 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.8■□□□□ 0.92
MCF2L-226ENST00000486210 ATP2A1O14983 1001 aa20.79■□□□□ 0.92
MCF2L-226ENST00000486210 CTAGE5O15320 804 aa20.79■□□□□ 0.92
MCF2L-226ENST00000486210 GJA9P57773 515 aa20.79■□□□□ 0.92
MCF2L-226ENST00000486210 PTH1RQ03431 593 aa20.79■□□□□ 0.92
MCF2L-226ENST00000486210 ADGRE1Q14246 886 aa20.79■□□□□ 0.92
MCF2L-226ENST00000486210 GIMAP6Q6P9H5 292 aa20.79■□□□□ 0.92
MCF2L-226ENST00000486210 CASC1Q6TDU7 716 aa20.79■□□□□ 0.92
MCF2L-226ENST00000486210 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.79■□□□□ 0.92
MCF2L-226ENST00000486210 GAS2L1Q99501 681 aaPredicted RBP20.79■□□□□ 0.92
MCF2L-226ENST00000486210 PPP1R12CQ9BZL4 782 aa20.79■□□□□ 0.92
MCF2L-226ENST00000486210 F5H6K3 240 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 ARVCFO00192 962 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 NDUFB10O96000 172 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 RASA1P20936 1047 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 TDO2P48775 406 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 MFAP1P55081 439 aaKnown RBP20.78■□□□□ 0.92
MCF2L-226ENST00000486210 KLRC3Q07444 240 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 CCDC144BQ3MJ40 725 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 SBK1Q52WX2 424 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 AKNAD1Q5T1N1 836 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 CPXCR1Q8N123 301 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 PCSK9Q8NBP7 692 aaKnown RBP20.78■□□□□ 0.92
MCF2L-226ENST00000486210 KATNBL1Q9H079 304 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 NYAP2Q9P242 653 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 RAPGEFL1Q9UHV5 662 aa20.78■□□□□ 0.92
MCF2L-226ENST00000486210 A0A0U1RQG5 324 aaPredicted RBP20.77■□□□□ 0.92
MCF2L-226ENST00000486210 MINDY4BA8MYZ0 360 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms