RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 RABEP1Q15276 862 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 ANKRD1Q15327 319 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 CCDC96Q2M329 555 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 SLC35G1Q2M3R5 365 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 TTBK2Q6IQ55 1244 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 NFXL1Q6ZNB6 911 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 STAG2Q8N3U4 1231 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 ZNF274Q96GC6 653 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 PAGR1Q9BTK6 254 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 MYL10Q9BUA6 226 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 SPZ1Q9BXG8 430 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 RANBP17Q9H2T7 1088 aaKnown RBP10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 RIOX1Q9H6W3 641 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 SLC38A10Q9HBR0 1119 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 FAM217BQ9NTX9 383 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 BTBD7Q9P203 1132 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 ZNF214Q9UL59 606 aaPredicted RBP10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 PRR12Q9ULL5 1215 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 LCTP09848 1927 aa10.86□□□□□ -0.67
SHROOM3-207ENST00000485780 ZNF536O15090 1300 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 ZBTB43O43298 467 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 GOLGA8HP0CJ92 632 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 CCL5P13501 91 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 KIF5BP33176 963 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 NEK4P51957 841 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 AK2P54819 239 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 ERVK-9P63128 1117 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 ERVK-24P63145 666 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 FUT2Q10981 343 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 IRF5Q13568 498 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 TMEM132BQ14DG7 1078 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 MTFR1Q15390 333 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 SYDE2Q5VT97 1194 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 MICU3Q86XE3 530 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 FANCBQ8NB91 859 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 SHCBP1Q8NEM2 672 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 GPRC5AQ8NFJ5 357 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 CTCFLQ8NI51 663 aaPredicted RBP10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 LZTS2Q9BRK4 669 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 MTMR7Q9Y216 660 aa10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 ZNFX1Q9P2E3 1918 aaKnown RBP10.85□□□□□ -0.67
SHROOM3-207ENST00000485780 GOLGA8BA8MQT2 603 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 KLRF2D3W0D1 207 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 CYTH3O43739 400 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 INHAP05111 366 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 ELNP15502 786 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 PDIA3P30101 505 aaKnown RBP10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 SLC16A2P36021 539 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 GNAQP50148 359 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 FGD1P98174 961 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 PRPF38BQ5VTL8 546 aaKnown RBP10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 SYNE3Q6ZMZ3 975 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 TMTC3Q6ZXV5 915 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 ADGRF4Q8IZF3 695 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 PXYLP1Q8TE99 480 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 NUP133Q8WUM0 1156 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 KIFC2Q96AC6 838 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 SPATC1LQ9H0A9 340 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 RNF208Q9H0X6 261 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 GPCPD1Q9NPB8 672 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 RBM28Q9NW13 759 aaKnown RBP10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 TPCN1Q9ULQ1 816 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 PLXNA1Q9UIW2 1896 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 CNTNAP5Q8WYK1 1306 aa10.84□□□□□ -0.67
SHROOM3-207ENST00000485780 GOLGA8AA7E2F4 631 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 PLEKHA8P1O95397 391 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 ICAM1P05362 532 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 RXRAP19793 462 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 CDC27P30260 824 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 MAPK4P31152 587 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 COPB2P35606 906 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 METAP2P50579 478 aaKnown RBP eCLIP10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 CCNA1P78396 465 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 NTRK3Q16288 839 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 RTN1Q16799 776 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 Q3C1V9 767 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 RIOX2Q8IUF8 465 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 SOCS4Q8WXH5 440 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 TEX13BQ9BXU2 312 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 CPVLQ9H3G5 476 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 JMJD4Q9H9V9 463 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 PNMA2Q9UL42 364 aa10.83□□□□□ -0.68
SHROOM3-207ENST00000485780 CCDC196A0A1B0GTZ2 297 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 ZBTB5O15062 677 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 PEX10O60683 326 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 PFKFB2O60825 505 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 ZBED4O75132 1171 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 SLC25A27O95847 323 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 GJB1P08034 283 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 STAT3P40763 770 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 IKQ13123 557 aaPredicted RBP10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 CDC37Q16543 378 aaPredicted RBP10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 WDR78Q5VTH9 848 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 SRBD1Q8N5C6 995 aaKnown RBP10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 CHMP4CQ96CF2 233 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 NUDT12Q9BQG2 462 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 MOV10L1Q9BXT6 1211 aaKnown RBP10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 UBA5Q9GZZ9 404 aa10.82□□□□□ -0.68
SHROOM3-207ENST00000485780 UNC93B1Q9H1C4 597 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms