RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 PGK2P07205 417 aa12.63□□□□□ -0.39
HMGN1-215ENST00000485550 SBK1Q52WX2 424 aa12.63□□□□□ -0.39
HMGN1-215ENST00000485550 TMEM240Q5SV17 173 aa12.63□□□□□ -0.39
HMGN1-215ENST00000485550 AKNAD1Q5T1N1 836 aa12.63□□□□□ -0.39
HMGN1-215ENST00000485550 NUP88Q99567 741 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-215ENST00000485550 MROH8Q9H579 483 aa12.63□□□□□ -0.39
HMGN1-215ENST00000485550 GOPCQ9HD26 462 aa12.63□□□□□ -0.39
HMGN1-215ENST00000485550 STARD7Q9NQZ5 370 aa12.63□□□□□ -0.39
HMGN1-215ENST00000485550 PATL2C9JE40 543 aaKnown RBP12.62□□□□□ -0.39
HMGN1-215ENST00000485550 TIMP1P01033 207 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 ZFYP08048 801 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-215ENST00000485550 ACRP10323 421 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 FCER1AP12319 257 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 RRP1P56182 461 aaKnown RBP12.62□□□□□ -0.39
HMGN1-215ENST00000485550 GIMAP6Q6P9H5 292 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 C16orf59Q7L2K0 433 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 ANKRD33Q7Z3H0 272 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 ZNF444Q8N0Y2 327 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-215ENST00000485550 ABRAQ8N0Z2 381 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 PI4K2BQ8TCG2 481 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 TOX2Q96NM4 488 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 FSD1Q9BTV5 496 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 CLIP2Q9UDT6 1046 aa12.62□□□□□ -0.39
HMGN1-215ENST00000485550 CHD7Q9P2D1 2997 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 VWA5AO00534 786 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 ERC2O15083 957 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 ADAMTS4O75173 837 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 ZNF865P0CJ78 1059 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-215ENST00000485550 CSF2RAP15509 400 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 TIE1P35590 1138 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 STAT3P40763 770 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 ACLYP53396 1101 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 MFSD5Q6N075 450 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 IFNL3Q8IZI9 196 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 CRBNQ96SW2 442 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 MMP19Q99542 508 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 TINF2Q9BSI4 451 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 TBX21Q9UL17 535 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 PPP1R9AQ9ULJ8 1098 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 TTC41PQ6P2S7 1318 aa12.61□□□□□ -0.39
HMGN1-215ENST00000485550 F5H6K3 240 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 SLC25A27O95847 323 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 AKR1A1P14550 325 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 GNAT2P19087 354 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-215ENST00000485550 KLRC3Q07444 240 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 PPIGQ13427 754 aaKnown RBP eCLIP12.6□□□□□ -0.395e-19■■□□□ 12
HMGN1-215ENST00000485550 KCNA10Q16322 511 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 LRRFIP1Q32MZ4 808 aaKnown RBP12.6□□□□□ -0.39
HMGN1-215ENST00000485550 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 ZNF365Q70YC5 407 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 RIOX2Q8IUF8 465 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 MICALL1Q8N3F8 863 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 CHMP4CQ96CF2 233 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 YTHDC1Q96MU7 727 aaKnown RBP12.6□□□□□ -0.39
HMGN1-215ENST00000485550 PPP1R12CQ9BZL4 782 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 NKX2-4Q9H2Z4 354 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 NYAP2Q9P242 653 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 NRBP1Q9UHY1 535 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 MSRAQ9UJ68 235 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 ADAMTS5Q9UNA0 930 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 BRWD1Q9NSI6 2320 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 SYNRGQ9UMZ2 1314 aa12.6□□□□□ -0.39
HMGN1-215ENST00000485550 SCN5AQ14524 2016 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 ROBO3Q96MS0 1386 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 MYH4Q9Y623 1939 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 MYADML2A6NDP7 307 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 NDUFB10O96000 172 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 MX1P20591 662 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 TFF2Q03403 129 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 KCTD2Q14681 263 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 ZNF792Q3KQV3 632 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 RASIP1Q5U651 963 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 CPXCR1Q8N123 301 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 NUP133Q8WUM0 1156 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 SLF1Q9BQI6 1058 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 TSEN34Q9BSV6 310 aaKnown RBP12.59□□□□□ -0.39
HMGN1-215ENST00000485550 NACAP1Q9BZK3 213 aa12.59□□□□□ -0.39
HMGN1-215ENST00000485550 IGKV6D-41A0A0C4DH26 115 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 MOXD2PA6NHM9 499 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 LRRC37A2A6NM11 1700 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 TTLL13PA6NNM8 815 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 ZMYM1Q5SVZ6 1142 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 CCDC174Q6PII3 467 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 LRRC47Q8N1G4 583 aaKnown RBP12.58□□□□□ -0.4
HMGN1-215ENST00000485550 TMEM199Q8N511 208 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 KLHDC9Q8NEP7 349 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 REPS2Q8NFH8 660 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 KIFC2Q96AC6 838 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 VTI1AQ96AJ9 217 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 CEP95Q96GE4 821 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 C1QTNF1Q9BXJ1 281 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 NAPBQ9H115 298 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 ZNF287Q9HBT7 754 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 INCENPQ9NQS7 918 aa12.58□□□□□ -0.4
HMGN1-215ENST00000485550 CXXC1Q9P0U4 656 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-215ENST00000485550 ZNF214Q9UL59 606 aaPredicted RBP12.58□□□□□ -0.4
HMGN1-215ENST00000485550 ISY1Q9ULR0 285 aaKnown RBP12.58□□□□□ -0.4
HMGN1-215ENST00000485550 CNPY2Q9Y2B0 182 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms