RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 CREB3L3Q68CJ9 461 aa9.16□□□□□ -0.94
MACF1-220ENST00000485063 KCTD1Q719H9 257 aa9.16□□□□□ -0.94
MACF1-220ENST00000485063 DPP9Q86TI2 863 aa9.16□□□□□ -0.94
MACF1-220ENST00000485063 RIOX2Q8IUF8 465 aa9.16□□□□□ -0.94
MACF1-220ENST00000485063 CPXCR1Q8N123 301 aa9.16□□□□□ -0.94
MACF1-220ENST00000485063 PNMA1Q8ND90 353 aa9.16□□□□□ -0.94
MACF1-220ENST00000485063 SH3TC2Q8TF17 1288 aa9.16□□□□□ -0.94
MACF1-220ENST00000485063 ARMC5Q96C12 935 aa9.16□□□□□ -0.94
MACF1-220ENST00000485063 CHMP4CQ96CF2 233 aa9.16□□□□□ -0.94
MACF1-220ENST00000485063 TEX13BQ9BXU2 312 aa9.16□□□□□ -0.94
MACF1-220ENST00000485063 BOLA1Q9Y3E2 137 aa9.16□□□□□ -0.94
MACF1-220ENST00000485063 SLC27A2O14975 620 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 PDHBP11177 359 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 FCER1AP12319 257 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 XRCC5P13010 732 aaKnown RBP9.15□□□□□ -0.94
MACF1-220ENST00000485063 MCM5P33992 734 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 MAP2K5Q13163 448 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 KRT32Q14532 448 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 KCTD2Q14681 263 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 WTAPQ15007 396 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 ASPRV1Q53RT3 343 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 SNRNP48Q6IEG0 339 aaKnown RBP9.15□□□□□ -0.94
MACF1-220ENST00000485063 CYB5R4Q7L1T6 521 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 ENAHQ8N8S7 591 aaPredicted RBP9.15□□□□□ -0.94
MACF1-220ENST00000485063 ANKS1AQ92625 1134 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 ZNF333Q96JL9 665 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 MMP19Q99542 508 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 APBA2Q99767 749 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 MTA3Q9BTC8 594 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 SLC38A10Q9HBR0 1119 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 GPCPD1Q9NPB8 672 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 FBXO40Q9UH90 709 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 GJD2Q9UKL4 321 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 PNMA2Q9UL42 364 aa9.15□□□□□ -0.94
MACF1-220ENST00000485063 ZNF236Q9UL36 1845 aa9.15□□□□□ -0.95
MACF1-220ENST00000485063 FRMPD2Q68DX3 1309 aaPredicted RBP9.14□□□□□ -0.95
MACF1-220ENST00000485063 MYH6P13533 1939 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 ATP2A1O14983 1001 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 MYCP01106 439 aaPredicted RBP9.14□□□□□ -0.95
MACF1-220ENST00000485063 HMGCRP04035 888 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 PARP1P09874 1014 aaKnown RBP9.14□□□□□ -0.95
MACF1-220ENST00000485063 ELNP15502 786 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 ZNF543Q08ER8 600 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 GRB14Q14449 540 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 TMEM67Q5HYA8 995 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 MORN1Q5T089 497 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 SYDE2Q5VT97 1194 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 POTEEQ6S8J3 1075 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 ABRAQ8N0Z2 381 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 TMTC2Q8N394 836 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 NKX2-3Q8TAU0 364 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 TMEM87BQ96K49 555 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 RAVER2Q9HCJ3 691 aaKnown RBP9.14□□□□□ -0.95
MACF1-220ENST00000485063 ZNF214Q9UL59 606 aaPredicted RBP9.14□□□□□ -0.95
MACF1-220ENST00000485063 PRR12Q9ULL5 1215 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 PLXNA1Q9UIW2 1896 aa9.14□□□□□ -0.95
MACF1-220ENST00000485063 RBBP6Q7Z6E9 1792 aaKnown RBP9.14□□□□□ -0.95
MACF1-220ENST00000485063 CCDC69A6NI79 296 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 EPB41L2O43491 1005 aaKnown RBP9.13□□□□□ -0.95
MACF1-220ENST00000485063 PRC1O43663 620 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 DHX16O60231 1041 aaKnown RBP9.13□□□□□ -0.95
MACF1-220ENST00000485063 INHAP05111 366 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 HMGB1P09429 215 aaKnown RBP9.13□□□□□ -0.95
MACF1-220ENST00000485063 SNHG28P0DPA3 235 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 ADORA2AP29274 412 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 SLC16A2P36021 539 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 SOX10P56693 466 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 SEC23AQ15436 765 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 TKFCQ3LXA3 575 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 MFSD14CQ5VZR4 134 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 CCDC174Q6PII3 467 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 BTNL9Q6UXG8 535 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 NFXL1Q6ZNB6 911 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 STOX1Q6ZVD7 989 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 CHST3Q7LGC8 479 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 CATIPQ7Z7H3 387 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 MB21D2Q8IYB1 491 aaPredicted RBP9.13□□□□□ -0.95
MACF1-220ENST00000485063 CHST13Q8NET6 341 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 REPS2Q8NFH8 660 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 DDX11Q96FC9 970 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 NEK1Q96PY6 1258 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 RNF208Q9H0X6 261 aa9.13□□□□□ -0.95
MACF1-220ENST00000485063 HMX1Q9NP08 348 aaPredicted RBP9.13□□□□□ -0.95
MACF1-220ENST00000485063 HOXC6P09630 235 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 GOLGA8HP0CJ92 632 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 ALAS1P13196 640 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 CCL5P13501 91 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 CAPN2P17655 700 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 FGD1P98174 961 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 TSGA10IPQ3SY00 556 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 TTBK2Q6IQ55 1244 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 SYNE3Q6ZMZ3 975 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 ANKRD35Q8N283 1001 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 USP6NLQ92738 828 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 RANBP17Q9H2T7 1088 aaKnown RBP9.12□□□□□ -0.95
MACF1-220ENST00000485063 ACAD9Q9H845 621 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 HOMER2Q9NSB8 354 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 CCPG1Q9ULG6 757 aa9.12□□□□□ -0.95
MACF1-220ENST00000485063 RPTORQ8N122 1335 aa9.11□□□□□ -0.95
MACF1-220ENST00000485063 ICAM1P05362 532 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms