RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 ZCCHC4Q9H5U6 513 aa6.29□□□□□ -1.4
SSBP1-211ENST00000484178 ROBO2Q9HCK4 1378 aa6.29□□□□□ -1.4
SSBP1-211ENST00000484178 PTPRKQ15262 1439 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 SMG6Q86US8 1419 aaKnown RBP6.28□□□□□ -1.4
SSBP1-211ENST00000484178 EFEMP2O95967 443 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 HSPA5P11021 654 aaKnown RBP6.28□□□□□ -1.4
SSBP1-211ENST00000484178 BMP7P18075 431 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 YBX1P67809 324 aaKnown RBP6.28□□□□□ -1.4
SSBP1-211ENST00000484178 RNF4P78317 190 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 RELL1Q8IUW5 271 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 PHACTR4Q8IZ21 702 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 MAP6Q96JE9 813 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 MPHOSPH9Q99550 1183 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.28□□□□□ -1.4
SSBP1-211ENST00000484178 BCL11AQ9H165 835 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 PRKRIP1Q9H875 184 aaPredicted RBP6.28□□□□□ -1.4
SSBP1-211ENST00000484178 KCNQ5Q9NR82 932 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 RTEL1Q9NZ71 1219 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 KLHL3Q9UH77 587 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 RAD54L2Q9Y4B4 1467 aa6.28□□□□□ -1.4
SSBP1-211ENST00000484178 WASHC2AQ641Q2 1341 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 EPRSP07814 1512 aaKnown RBP6.27□□□□□ -1.41
SSBP1-211ENST00000484178 ZMYM4Q5VZL5 1548 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 TMEM82A0PJX8 343 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 N4BP3O15049 544 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 FOXD2O60548 495 aaPredicted RBP6.27□□□□□ -1.41
SSBP1-211ENST00000484178 TRIM13O60858 407 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 PNLIPP16233 465 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 GARTP22102 1010 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 GBP1P32455 592 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 MLECQ14165 292 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 MRPL58Q14197 206 aaKnown RBP6.27□□□□□ -1.41
SSBP1-211ENST00000484178 SSPNQ14714 243 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 DACT3Q96B18 629 aaPredicted RBP6.27□□□□□ -1.41
SSBP1-211ENST00000484178 TCTN2Q96GX1 697 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 KIF2CQ99661 725 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 LRRC3Q9BY71 257 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 ANKRD30BQ9BXX2 1392 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 IQGAP2Q13576 1575 aa6.27□□□□□ -1.41
SSBP1-211ENST00000484178 SPATA31E1Q6ZUB1 1445 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 SLC22A31A6NKX4 558 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 ABLIM1O14639 778 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 SMARCA5O60264 1052 aaPredicted RBP6.26□□□□□ -1.41
SSBP1-211ENST00000484178 GRIN3BO60391 1043 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 UBOX5O94941 541 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 ATE1O95260 518 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 RPL10P27635 214 aaKnown RBP6.26□□□□□ -1.41
SSBP1-211ENST00000484178 GBP2P32456 591 aaPredicted RBP6.26□□□□□ -1.41
SSBP1-211ENST00000484178 PCBP3P57721 371 aaKnown RBP6.26□□□□□ -1.41
SSBP1-211ENST00000484178 ERVFRD-1P60508 538 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 SRSF3P84103 164 aaKnown RBP6.26□□□□□ -1.41
SSBP1-211ENST00000484178 XPCQ01831 940 aaPredicted RBP6.26□□□□□ -1.41
SSBP1-211ENST00000484178 NBPF9Q3BBW0 867 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 ADGRF1Q5T601 910 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 FAM196AQ6ZSG2 479 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 CXorf38Q8TB03 319 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 BACH2Q9BYV9 841 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 TCFL5Q9UL49 500 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 IRAK3Q9Y616 596 aa6.26□□□□□ -1.41
SSBP1-211ENST00000484178 RNF123Q5XPI4 1314 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 WASHC2CQ9Y4E1 1318 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 URB2Q14146 1524 aaKnown RBP6.25□□□□□ -1.41
SSBP1-211ENST00000484178 ARHGEF12Q9NZN5 1544 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 IRS4O14654 1257 aaPredicted RBP6.25□□□□□ -1.41
SSBP1-211ENST00000484178 USP2O75604 605 aaPredicted RBP6.25□□□□□ -1.41
SSBP1-211ENST00000484178 ERCC5P28715 1186 aaPredicted RBP6.25□□□□□ -1.41
SSBP1-211ENST00000484178 CCNFP41002 786 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 RAD51AP2Q09MP3 1159 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 NBPF12Q5TAG4 269 aaPredicted RBP6.25□□□□□ -1.41
SSBP1-211ENST00000484178 CDCP2Q5VXM1 449 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 OLFML2BQ68BL8 750 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 WAPLQ7Z5K2 1190 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 GOLM1Q8NBJ4 401 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 HHIPL1Q96JK4 782 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 FOXP3Q9BZS1 431 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 XYLT2Q9H1B5 865 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 SIRT5Q9NXA8 310 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 TNFRSF10DQ9UBN6 386 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 ZMYM5Q9UJ78 669 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 ADGRL2O95490 1459 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 POLR1AO95602 1720 aaPredicted RBP6.25□□□□□ -1.41
SSBP1-211ENST00000484178 DNMT1P26358 1616 aaKnown RBP6.25□□□□□ -1.41
SSBP1-211ENST00000484178 NESP48681 1621 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 WDR62O43379 1518 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 DAPK1P53355 1430 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 UHRF1BP1Q6BDS2 1440 aa6.25□□□□□ -1.41
SSBP1-211ENST00000484178 TEX14Q8IWB6 1497 aa6.24□□□□□ -1.41
SSBP1-211ENST00000484178 SCAMP3O14828 347 aaKnown RBP6.24□□□□□ -1.41
SSBP1-211ENST00000484178 SORBS3O60504 671 aa6.24□□□□□ -1.41
SSBP1-211ENST00000484178 SYN1P17600 705 aa6.24□□□□□ -1.41
SSBP1-211ENST00000484178 GALK1P51570 392 aa6.24□□□□□ -1.41
SSBP1-211ENST00000484178 HDLBPQ00341 1268 aaKnown RBP6.24□□□□□ -1.41
SSBP1-211ENST00000484178 NFIXQ14938 502 aa6.24□□□□□ -1.41
SSBP1-211ENST00000484178 SLC14A2Q15849 920 aa6.24□□□□□ -1.41
SSBP1-211ENST00000484178 BBS9Q3SYG4 887 aa6.24□□□□□ -1.41
SSBP1-211ENST00000484178 CEP128Q6ZU80 1094 aa6.24□□□□□ -1.41
SSBP1-211ENST00000484178 CNTD2Q9H8S5 307 aa6.24□□□□□ -1.41
SSBP1-211ENST00000484178 MRS2Q9HD23 443 aa6.24□□□□□ -1.41
SSBP1-211ENST00000484178 GMIPQ9P107 970 aa6.24□□□□□ -1.41
SSBP1-211ENST00000484178 KIAA0586Q9BVV6 1533 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms