RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 USP17L22D6RA61 530 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 USP17L17D6RBQ6 530 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 USP17L19D6RCP7 530 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 USP17L20D6RJB6 530 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 TRAK2O60296 914 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 FLOT1O75955 427 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 BRD1O95696 1058 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 CYP2B6P20813 491 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 MCM5P33992 734 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 TFAP4Q01664 338 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 USP17L24Q0WX57 530 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 PABPC4Q13310 644 aaKnown RBP eCLIP8.07□□□□□ -1.12
BRCA1-216ENST00000484087 CCL14Q16627 93 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 ME3Q16798 604 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 GIMAP6Q6P9H5 292 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 ZKSCAN3Q9BRR0 538 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 LARP6Q9BRS8 491 aaKnown RBP8.07□□□□□ -1.12
BRCA1-216ENST00000484087 IL17RBQ9NRM6 502 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 GINM1Q9NU53 330 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 MORF4L1Q9UBU8 362 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 CLIP2Q9UDT6 1046 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 TPCN1Q9ULQ1 816 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 ISY1Q9ULR0 285 aaKnown RBP8.07□□□□□ -1.12
BRCA1-216ENST00000484087 TAF6LQ9Y6J9 622 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 ZNFX1Q9P2E3 1918 aaKnown RBP8.07□□□□□ -1.12
BRCA1-216ENST00000484087 ZMYM6O95789 1325 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 STX6O43752 255 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 ADCY3O60266 1144 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 RANBP6O60518 1105 aaKnown RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 NDUFB10O96000 172 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 TSPY3P0CV98 308 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 TSPY8P0CW00 308 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 GJB2P29033 226 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 GRK4P32298 578 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 GCLCP48506 637 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 USP14P54578 494 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 SNAP25P60880 206 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 TOB2Q14106 344 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 PLS1Q14651 629 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 ALX1Q15699 326 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 MCTP1Q6DN14 999 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 GPR142Q7Z601 462 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 ZNF444Q8N0Y2 327 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 GPRC5AQ8NFJ5 357 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 TRIB2Q92519 343 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 BRF1Q92994 677 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 ARMC5Q96C12 935 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 SHISA4Q96DD7 197 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 CCDC17Q96LX7 622 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 TCEANC2Q96MN5 208 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 UNC93B1Q9H1C4 597 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 BIN2Q9UBW5 565 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 PLIN4Q96Q06 1357 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 LCTP09848 1927 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 ALPK3Q96L96 1907 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 WDR19Q8NEZ3 1342 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 TSPY2A6NKD2 308 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 F5H6K3 240 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 PPP1R37O75864 691 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 LARGE1O95461 756 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 INHAP05111 366 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 NCLP19338 710 aaKnown RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 DEKP35659 375 aaKnown RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 EXOSC10Q01780 885 aaKnown RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 PDE4BQ07343 736 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 KLRC3Q07444 240 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 COL9A3Q14050 684 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 CSPP1Q1MSJ5 1256 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 STOX1Q6ZVD7 989 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 FBXL16Q8N461 479 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 NECAB1Q8N987 351 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 FAM184AQ8NB25 1140 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 LLPHQ9BRT6 129 aaKnown RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 MOV10L1Q9BXT6 1211 aaKnown RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 CNNM2Q9H8M5 875 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 KANSL2Q9H9L4 492 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 MTMR4Q9NYA4 1195 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 FLRT1Q9NZU1 646 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 GJD2Q9UKL4 321 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 NAP1L2Q9ULW6 460 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-216ENST00000484087 STX8Q9UNK0 236 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 ZNF236Q9UL36 1845 aa8.06□□□□□ -1.12
BRCA1-216ENST00000484087 MCM3APO60318 1980 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 WDR46O15213 610 aaKnown RBP8.05□□□□□ -1.12
BRCA1-216ENST00000484087 DHX16O60231 1041 aaKnown RBP8.05□□□□□ -1.12
BRCA1-216ENST00000484087 ZSCAN22P10073 491 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-216ENST00000484087 CCL5P13501 91 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 SYT1P21579 422 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 HMGN5P82970 282 aaKnown RBP8.05□□□□□ -1.12
BRCA1-216ENST00000484087 STK3Q13188 491 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 PKP1Q13835 747 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 TMEM132BQ14DG7 1078 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 FOXD4L5Q5VV16 416 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-216ENST00000484087 LARP1BQ659C4 914 aaKnown RBP8.05□□□□□ -1.12
BRCA1-216ENST00000484087 SMYD5Q6GMV2 418 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 LBX2Q6XYB7 198 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 KCTD1Q719H9 257 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 NEDD1Q8NHV4 660 aa8.05□□□□□ -1.12
BRCA1-216ENST00000484087 FOXD4L4Q8WXT5 416 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-216ENST00000484087 GTF3C6Q969F1 213 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms