RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ZNF365Q70YC5 407 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 ZNF467Q7Z7K2 595 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-206ENST00000483030 ANKRD35Q8N283 1001 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 TMEM199Q8N511 208 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 KIFC2Q96AC6 838 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 STRBPQ96SI9 672 aaKnown RBP8.84□□□□□ -0.99
CSDE1-206ENST00000483030 GAS2L1Q99501 681 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-206ENST00000483030 PBX4Q9BYU1 374 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 PPP1R12CQ9BZL4 782 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 ABHD16BQ9H3Z7 469 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 PRDM12Q9H4Q4 367 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 TSHZ2Q9NRE2 1034 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 ZBTB40Q9NUA8 1239 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 ARPP21Q9UBL0 812 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-206ENST00000483030 COG6Q9Y2V7 657 aa8.84□□□□□ -0.99
CSDE1-206ENST00000483030 TTC28Q96AY4 2481 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 A0A0G2JMZ2 1700 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 A0A0U1RQG5 324 aaPredicted RBP8.83□□□□□ -1
CSDE1-206ENST00000483030 GSG1L2A8MUP6 293 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 TNFRSF10AO00220 468 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 ATP2A1O14983 1001 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 MS4A1P11836 297 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 CYP2C18P33260 490 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 GJA9P57773 515 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 CCDC85BQ15834 202 aaPredicted RBP8.83□□□□□ -1
CSDE1-206ENST00000483030 SBK1Q52WX2 424 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 RASIP1Q5U651 963 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 NOL8Q76FK4 1167 aaKnown RBP8.83□□□□□ -1
CSDE1-206ENST00000483030 ARMCX2Q7L311 632 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 FAM126BQ8IXS8 530 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 ZNF444Q8N0Y2 327 aaPredicted RBP8.83□□□□□ -1
CSDE1-206ENST00000483030 FGD4Q96M96 766 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 UPF3AQ9H1J1 476 aaKnown RBP8.83□□□□□ -1
CSDE1-206ENST00000483030 SLC38A10Q9HBR0 1119 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 SMCHD1A6NHR9 2005 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 EYSQ5T1H1 3165 aa8.83□□□□□ -1
CSDE1-206ENST00000483030 IGKV6D-41A0A0C4DH26 115 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 CTAGE5O15320 804 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 TLR3O15455 904 aaKnown RBP8.82□□□□□ -1
CSDE1-206ENST00000483030 SMARCA5O60264 1052 aaPredicted RBP8.82□□□□□ -1
CSDE1-206ENST00000483030 PRDM1O75626 825 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 COL9A1P20849 921 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 IGFBP4P22692 258 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 BEX3Q00994 111 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 CNTN2Q02246 1040 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 ADGRE1Q14246 886 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 NBR1Q14596 966 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 AKNAD1Q5T1N1 836 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 GIMAP6Q6P9H5 292 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 CXCL17Q6UXB2 119 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 CCDC144CPQ8IYA2 1237 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 CHST13Q8NET6 341 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 OSBP2Q969R2 916 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 MKL1Q969V6 931 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 CEP95Q96GE4 821 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 IL23AQ9NPF7 189 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 HOMER2Q9NSB8 354 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 MTMR4Q9NYA4 1195 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 CXXC1Q9P0U4 656 aaPredicted RBP8.82□□□□□ -1
CSDE1-206ENST00000483030 FBXO40Q9UH90 709 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 MSRAQ9UJ68 235 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 FEM1BQ9UK73 627 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 DDX19BQ9UMR2 479 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 NAV1Q8NEY1 1877 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 PRUNE2Q8WUY3 3088 aa8.82□□□□□ -1
CSDE1-206ENST00000483030 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.81□□□□□ -1
CSDE1-206ENST00000483030 CD4P01730 458 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 FGBP02675 491 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 APPP05067 770 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 OAZ1P54368 228 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 TNFAIP2Q03169 654 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 RAB30Q15771 203 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 SLFN13Q68D06 897 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 PSRC1Q6PGN9 363 aaPredicted RBP8.81□□□□□ -1
CSDE1-206ENST00000483030 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
CSDE1-206ENST00000483030 LRRC47Q8N1G4 583 aaKnown RBP8.81□□□□□ -1
CSDE1-206ENST00000483030 ATXN2LQ8WWM7 1075 aaKnown RBP8.81□□□□□ -1
CSDE1-206ENST00000483030 HERVK_113Q902F9 699 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 CHMP4CQ96CF2 233 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 ASB2Q96Q27 587 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 LRRCC1Q9C099 1032 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 KATNBL1Q9H079 304 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 NKX2-4Q9H2Z4 354 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 HIPK3Q9H422 1215 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 ECHDC1Q9NTX5 307 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 ISY1Q9ULR0 285 aaKnown RBP8.81□□□□□ -1
CSDE1-206ENST00000483030 GTF3C3Q9Y5Q9 886 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 CDH23Q9H251 3354 aa8.81□□□□□ -1
CSDE1-206ENST00000483030 SPTBN5Q9NRC6 3674 aaKnown RBP8.81□□□□□ -1
CSDE1-206ENST00000483030 UMODL1Q5DID0 1318 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 SOWAHBA6NEL2 793 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 TMEM232C9JQI7 657 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 RNF113AO15541 343 aaKnown RBP8.8□□□□□ -1
CSDE1-206ENST00000483030 DYNC1LI2O43237 492 aaPredicted RBP8.8□□□□□ -1
CSDE1-206ENST00000483030 TTLL1O95922 423 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 BMP3P12645 472 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 PTGS1P23219 599 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 TDO2P48775 406 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 CCL23P55773 120 aa8.8□□□□□ -1
CSDE1-206ENST00000483030 NKX3-2P78367 333 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms