RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 CCND3P30281 292 aaPredicted RBP15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 RGS2P41220 211 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 BECN1Q14457 450 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 APOA5Q6Q788 366 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 LBX2Q6XYB7 198 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 SYNE3Q6ZMZ3 975 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 CATIPQ7Z7H3 387 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 SGMS1Q86VZ5 419 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 MICU3Q86XE3 530 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 ZNF654Q8IZM8 581 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 TMTC2Q8N394 836 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 PNMA1Q8ND90 353 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 NUP133Q8WUM0 1156 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 RPAP3Q9H6T3 665 aaPredicted RBP15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 ARHGEF10LQ9HCE6 1279 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 NYAP2Q9P242 653 aa15.6■□□□□ 0.09
ZKSCAN1-204ENST00000482979 RAD21O60216 631 aa15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 RXRAP19793 462 aa15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 MAP2K5Q13163 448 aa15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 KIAA1755Q5JYT7 1200 aa15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 CCAR1Q8IX12 1150 aaKnown RBP15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 CCDC144CPQ8IYA2 1237 aa15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 ANKS1AQ92625 1134 aa15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 TMX3Q96JJ7 454 aa15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 ZSCAN31Q96LW9 406 aaPredicted RBP15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 APBA2Q99767 749 aa15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 FLRT1Q9NZU1 646 aa15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 RLFQ13129 1914 aa15.59■□□□□ 0.09
ZKSCAN1-204ENST00000482979 GOLGA8AA7E2F4 631 aa15.58■□□□□ 0.08
ZKSCAN1-204ENST00000482979 ZBTB43O43298 467 aa15.58■□□□□ 0.08
ZKSCAN1-204ENST00000482979 CCT2P78371 535 aaKnown RBP15.58■□□□□ 0.08
ZKSCAN1-204ENST00000482979 ME3Q16798 604 aa15.58■□□□□ 0.08
ZKSCAN1-204ENST00000482979 LHX8Q68G74 356 aa15.58■□□□□ 0.08
ZKSCAN1-204ENST00000482979 TRMT44Q8IYL2 757 aaKnown RBP15.58■□□□□ 0.08
ZKSCAN1-204ENST00000482979 C7orf61Q8IZ16 206 aa15.58■□□□□ 0.08
ZKSCAN1-204ENST00000482979 NECAB1Q8N987 351 aa15.58■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SLKQ9H2G2 1235 aaPredicted RBP15.58■□□□□ 0.08
ZKSCAN1-204ENST00000482979 C11orf49Q9H6J7 331 aa15.58■□□□□ 0.08
ZKSCAN1-204ENST00000482979 PFASO15067 1338 aa15.58■□□□□ 0.08
ZKSCAN1-204ENST00000482979 FRMPD3Q5JV73 1810 aa15.57■□□□□ 0.08
ZKSCAN1-204ENST00000482979 PTPREP23469 700 aa15.57■□□□□ 0.08
ZKSCAN1-204ENST00000482979 PDIA3P30101 505 aaKnown RBP15.57■□□□□ 0.08
ZKSCAN1-204ENST00000482979 NOVP48745 357 aa15.57■□□□□ 0.08
ZKSCAN1-204ENST00000482979 METAP2P50579 478 aaKnown RBP eCLIP15.57■□□□□ 0.085e-9■■■□□ 14.8
ZKSCAN1-204ENST00000482979 RASGRP2Q7LDG7 609 aa15.57■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SIAH1Q8IUQ4 282 aa15.57■□□□□ 0.08
ZKSCAN1-204ENST00000482979 ZNF274Q96GC6 653 aaPredicted RBP15.57■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SH2D4AQ9H788 454 aa15.57■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SH2B1Q9NRF2 756 aaPredicted RBP15.57■□□□□ 0.08
ZKSCAN1-204ENST00000482979 ISY1Q9ULR0 285 aaKnown RBP15.57■□□□□ 0.08
ZKSCAN1-204ENST00000482979 A0A0G2JMZ2 1700 aa15.57■□□□□ 0.08
ZKSCAN1-204ENST00000482979 DDAH1O94760 285 aa15.56■□□□□ 0.08
ZKSCAN1-204ENST00000482979 EVCP57679 992 aa15.56■□□□□ 0.08
ZKSCAN1-204ENST00000482979 CCNA1P78396 465 aa15.56■□□□□ 0.08
ZKSCAN1-204ENST00000482979 GRB14Q14449 540 aa15.56■□□□□ 0.08
ZKSCAN1-204ENST00000482979 WDR78Q5VTH9 848 aa15.56■□□□□ 0.08
ZKSCAN1-204ENST00000482979 CCDC83Q8IWF9 413 aa15.56■□□□□ 0.08
ZKSCAN1-204ENST00000482979 NPLOC4Q8TAT6 608 aa15.56■□□□□ 0.08
ZKSCAN1-204ENST00000482979 NCOA5Q9HCD5 579 aaKnown RBP15.56■□□□□ 0.08
ZKSCAN1-204ENST00000482979 CWC22Q9HCG8 908 aaKnown RBP15.56■□□□□ 0.08
ZKSCAN1-204ENST00000482979 ZMYND8Q9ULU4 1186 aaPredicted RBP15.56■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SLC15A5A6NIM6 579 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SOX1O00570 391 aaPredicted RBP15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 PFKFB2O60825 505 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 CALM1P0DP23 149 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 CALM2P0DP24 149 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 CALM3P0DP25 149 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 COL6A1P12109 1028 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SLC4A3P48751 1232 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 RTN1Q16799 776 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 CCDC96Q2M329 555 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 CTCFLQ8NI51 663 aaPredicted RBP15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 MKL1Q969V6 931 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 GDF15Q99988 308 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 MYH6P13533 1939 aa15.55■□□□□ 0.08
ZKSCAN1-204ENST00000482979 IGHA2P01877 340 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 HOXC6P09630 235 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SYN1P17600 705 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SCRN1Q12765 414 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 TROAPQ12815 778 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 COG2Q14746 738 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SLFN13Q68D06 897 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 GTF3C6Q969F1 213 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 MOV10L1Q9BXT6 1211 aaKnown RBP15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 GOPCQ9HD26 462 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 TMX2Q9Y320 296 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 PARP14Q460N5 1801 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 LAMA3Q16787 3333 aa15.54■□□□□ 0.08
ZKSCAN1-204ENST00000482979 A0A1W2PPC1 479 aa15.53■□□□□ 0.08
ZKSCAN1-204ENST00000482979 NDUFB10O96000 172 aa15.53■□□□□ 0.08
ZKSCAN1-204ENST00000482979 HSP90AA1P07900 732 aaKnown RBP15.53■□□□□ 0.08
ZKSCAN1-204ENST00000482979 RCAN1P53805 252 aa15.53■□□□□ 0.08
ZKSCAN1-204ENST00000482979 ST3GAL1Q11201 340 aa15.53■□□□□ 0.08
ZKSCAN1-204ENST00000482979 GRM4Q14833 912 aa15.53■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SPICE1Q8N0Z3 855 aa15.53■□□□□ 0.08
ZKSCAN1-204ENST00000482979 SPRYD3Q8NCJ5 442 aa15.53■□□□□ 0.08
ZKSCAN1-204ENST00000482979 GMCL1P1Q8NEA9 526 aa15.53■□□□□ 0.08
ZKSCAN1-204ENST00000482979 TRPV1Q8NER1 839 aa15.53■□□□□ 0.08
ZKSCAN1-204ENST00000482979 TANGO6Q9C0B7 1094 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms