RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 RANBP17Q9H2T7 1088 aaKnown RBP17.31■□□□□ 0.36
PHGDH-205ENST00000482968 ABT1Q9ULW3 272 aaKnown RBP17.31■□□□□ 0.36
PHGDH-205ENST00000482968 FSTL1Q12841 308 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 MOGSQ13724 837 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 SAFBQ15424 915 aaKnown RBP eCLIP17.3■□□□□ 0.36
PHGDH-205ENST00000482968 USH1GQ495M9 461 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 FBXO11Q86XK2 927 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 RGS22Q8NE09 1264 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 AMNQ9BXJ7 453 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 PCDHA1Q9Y5I3 950 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 TMEM88BA6NKF7 163 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 BTBD18B2RXH4 712 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 DSG3P32926 999 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 GTF2A2P52657 109 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 GNL2Q13823 731 aaKnown RBP17.3■□□□□ 0.36
PHGDH-205ENST00000482968 RGMBQ6NW40 437 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 DIS3L2Q8IYB7 885 aaKnown RBP17.3■□□□□ 0.36
PHGDH-205ENST00000482968 CCDC148Q8NFR7 591 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 CCDC12Q8WUD4 166 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-205ENST00000482968 ATG4CQ96DT6 458 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 MS4A4AQ96JQ5 239 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 HOXC10Q9NYD6 342 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 AGTPBP1Q9UPW5 1226 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 CTDP1Q9Y5B0 961 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-205ENST00000482968 TLL2Q9Y6L7 1015 aa17.3■□□□□ 0.36
PHGDH-205ENST00000482968 SMCHD1A6NHR9 2005 aa17.29■□□□□ 0.36
PHGDH-205ENST00000482968 SMCO2A6NFE2 343 aa17.29■□□□□ 0.36
PHGDH-205ENST00000482968 hCG_1984214I3L0E3 225 aa17.29■□□□□ 0.36
PHGDH-205ENST00000482968 ZBTB48P10074 688 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-205ENST00000482968 CETPP11597 493 aa17.29■□□□□ 0.36
PHGDH-205ENST00000482968 HOXA7P31268 230 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-205ENST00000482968 KIF23Q02241 960 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-205ENST00000482968 RESTQ13127 1097 aa17.29■□□□□ 0.36
PHGDH-205ENST00000482968 FAM173BQ6P4H8 233 aa17.29■□□□□ 0.36
PHGDH-205ENST00000482968 CPXCR1Q8N123 301 aa17.29■□□□□ 0.36
PHGDH-205ENST00000482968 ZNF713Q8N859 430 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-205ENST00000482968 OXER1Q8TDS5 423 aa17.29■□□□□ 0.36
PHGDH-205ENST00000482968 ZSCAN16Q9H4T2 348 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-205ENST00000482968 KIF28PB7ZC32 967 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 VWA5AO00534 786 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 ZBED4O75132 1171 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 TAL1P17542 331 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-205ENST00000482968 GPAT2Q6NUI2 795 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 CHAMP1Q96JM3 812 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 ZMYND12Q9H0C1 365 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 SLC38A10Q9HBR0 1119 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 LOC285556D6RIA3 1793 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 RLFQ13129 1914 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 PARP14Q460N5 1801 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 CCL15-CCL14A0A0B4J2E2 113 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 ADAMTS3O15072 1205 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 CALML3P27482 149 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 KRT2P35908 639 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 IRX3P78415 501 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-205ENST00000482968 NR5A1Q13285 461 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 NPY5RQ15761 445 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 CCL15Q16663 113 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 RASAL3Q86YV0 1011 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 AGBL1Q96MI9 1066 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 P2RX7Q99572 595 aaKnown RBP17.28■□□□□ 0.36
PHGDH-205ENST00000482968 RAVER2Q9HCJ3 691 aaKnown RBP17.28■□□□□ 0.36
PHGDH-205ENST00000482968 BRMS1Q9HCU9 246 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 C6orf50Q9HD87 102 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 PCDHA4Q9UN74 947 aa17.28■□□□□ 0.36
PHGDH-205ENST00000482968 FDX1P10109 184 aa17.27■□□□□ 0.35
PHGDH-205ENST00000482968 U2AF2P26368 475 aaKnown RBP eCLIP17.27■□□□□ 0.35
PHGDH-205ENST00000482968 BLIDQ8IZY5 108 aa17.27■□□□□ 0.35
PHGDH-205ENST00000482968 ASCC2Q9H1I8 757 aaPredicted RBP17.27■□□□□ 0.35
PHGDH-205ENST00000482968 FOXP1Q9H334 677 aaPredicted RBP17.27■□□□□ 0.35
PHGDH-205ENST00000482968 ADAMTS5Q9UNA0 930 aa17.27■□□□□ 0.35
PHGDH-205ENST00000482968 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.35
PHGDH-205ENST00000482968 ZNF536O15090 1300 aa17.27■□□□□ 0.35
PHGDH-205ENST00000482968 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-205ENST00000482968 ICAM1P05362 532 aa17.26■□□□□ 0.35
PHGDH-205ENST00000482968 GNA11P29992 359 aa17.26■□□□□ 0.35
PHGDH-205ENST00000482968 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.359e-7■■■■□ 21.6
PHGDH-205ENST00000482968 BRI3BPQ8WY22 251 aa17.26■□□□□ 0.35
PHGDH-205ENST00000482968 CCPG1Q9ULG6 757 aa17.26■□□□□ 0.35
PHGDH-205ENST00000482968 OSBPP22059 807 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 TRAF1Q13077 416 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 GALNT17Q6IS24 598 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 PPP1R18Q6NYC8 613 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 FAM177A1Q8N128 213 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-205ENST00000482968 PSTPIP2Q9H939 334 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 MYPNQ86TC9 1320 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 COL11A1P12107 1806 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-205ENST00000482968 ESYT2A0FGR8 921 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 BTBD19C9JJ37 291 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 ADCY7P51828 1080 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 DNM1Q05193 864 aaKnown RBP17.25■□□□□ 0.35
PHGDH-205ENST00000482968 PAXIP1Q6ZW49 1069 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-205ENST00000482968 BRAPQ7Z569 592 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 NOSTRINQ8IVI9 506 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 RASGRP4Q8TDF6 673 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 RIC8AQ9NPQ8 531 aa17.25■□□□□ 0.35
PHGDH-205ENST00000482968 TCHHQ07283 1943 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 PDHXO00330 501 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 SLC10A3P09131 477 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 ALAS1P13196 640 aa17.24■□□□□ 0.35
PHGDH-205ENST00000482968 MRPL12P52815 198 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms