RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 RASIP1Q5U651 963 aa15.33■□□□□ 0.04
TMEM54-206ENST00000482771 NOL8Q76FK4 1167 aaKnown RBP15.33■□□□□ 0.04
TMEM54-206ENST00000482771 ARMCX2Q7L311 632 aa15.33■□□□□ 0.04
TMEM54-206ENST00000482771 FGD4Q96M96 766 aa15.33■□□□□ 0.04
TMEM54-206ENST00000482771 UPF3AQ9H1J1 476 aaKnown RBP15.33■□□□□ 0.04
TMEM54-206ENST00000482771 SLC38A10Q9HBR0 1119 aa15.33■□□□□ 0.04
TMEM54-206ENST00000482771 FEM1BQ9UK73 627 aa15.33■□□□□ 0.04
TMEM54-206ENST00000482771 PLXNA1Q9UIW2 1896 aa15.32■□□□□ 0.04
TMEM54-206ENST00000482771 TLR3O15455 904 aaKnown RBP15.32■□□□□ 0.04
TMEM54-206ENST00000482771 BEX3Q00994 111 aa15.32■□□□□ 0.04
TMEM54-206ENST00000482771 CNTN2Q02246 1040 aa15.32■□□□□ 0.04
TMEM54-206ENST00000482771 CCDC85BQ15834 202 aaPredicted RBP15.32■□□□□ 0.04
TMEM54-206ENST00000482771 FAM126BQ8IXS8 530 aa15.32■□□□□ 0.04
TMEM54-206ENST00000482771 CCDC144CPQ8IYA2 1237 aa15.32■□□□□ 0.04
TMEM54-206ENST00000482771 CHST13Q8NET6 341 aa15.32■□□□□ 0.04
TMEM54-206ENST00000482771 MKL1Q969V6 931 aa15.32■□□□□ 0.04
TMEM54-206ENST00000482771 FBXO40Q9UH90 709 aa15.32■□□□□ 0.04
TMEM54-206ENST00000482771 MSRAQ9UJ68 235 aa15.32■□□□□ 0.04
TMEM54-206ENST00000482771 DDX19BQ9UMR2 479 aa15.32■□□□□ 0.04
TMEM54-206ENST00000482771 PARP14Q460N5 1801 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 MYH8P13535 1937 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 CTAGE5O15320 804 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 SMARCA5O60264 1052 aaPredicted RBP15.31■□□□□ 0.04
TMEM54-206ENST00000482771 PRDM1O75626 825 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 FGBP02675 491 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 COL9A1P20849 921 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 IGFBP4P22692 258 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 TNFAIP2Q03169 654 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 ADGRE1Q14246 886 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 AKNAD1Q5T1N1 836 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 GIMAP6Q6P9H5 292 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 PSRC1Q6PGN9 363 aaPredicted RBP15.31■□□□□ 0.04
TMEM54-206ENST00000482771 ATXN2LQ8WWM7 1075 aaKnown RBP15.31■□□□□ 0.04
TMEM54-206ENST00000482771 IL23AQ9NPF7 189 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 HOMER2Q9NSB8 354 aa15.31■□□□□ 0.04
TMEM54-206ENST00000482771 IGKV6D-41A0A0C4DH26 115 aa15.3■□□□□ 0.04
TMEM54-206ENST00000482771 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.3■□□□□ 0.04
TMEM54-206ENST00000482771 CD4P01730 458 aa15.3■□□□□ 0.04
TMEM54-206ENST00000482771 APPP05067 770 aa15.3■□□□□ 0.04
TMEM54-206ENST00000482771 CXCL17Q6UXB2 119 aa15.3■□□□□ 0.04
TMEM54-206ENST00000482771 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.3■□□□□ 0.04
TMEM54-206ENST00000482771 HERVK_113Q902F9 699 aa15.3■□□□□ 0.04
TMEM54-206ENST00000482771 OSBP2Q969R2 916 aa15.3■□□□□ 0.04
TMEM54-206ENST00000482771 CEP95Q96GE4 821 aa15.3■□□□□ 0.04
TMEM54-206ENST00000482771 ASB2Q96Q27 587 aa15.3■□□□□ 0.04
TMEM54-206ENST00000482771 LRRCC1Q9C099 1032 aa15.3■□□□□ 0.04
TMEM54-206ENST00000482771 KATNBL1Q9H079 304 aa15.3■□□□□ 0.04
TMEM54-206ENST00000482771 MTMR4Q9NYA4 1195 aa15.3■□□□□ 0.04
TMEM54-206ENST00000482771 CXXC1Q9P0U4 656 aaPredicted RBP15.3■□□□□ 0.04
TMEM54-206ENST00000482771 TMEM232C9JQI7 657 aa15.29■□□□□ 0.04
TMEM54-206ENST00000482771 OAZ1P54368 228 aa15.29■□□□□ 0.04
TMEM54-206ENST00000482771 NKX3-2P78367 333 aa15.29■□□□□ 0.04
TMEM54-206ENST00000482771 MRPS5P82675 430 aaKnown RBP15.29■□□□□ 0.04
TMEM54-206ENST00000482771 RAB30Q15771 203 aa15.29■□□□□ 0.04
TMEM54-206ENST00000482771 SLFN13Q68D06 897 aa15.29■□□□□ 0.04
TMEM54-206ENST00000482771 OTOP2Q7RTS6 562 aa15.29■□□□□ 0.04
TMEM54-206ENST00000482771 LRRC47Q8N1G4 583 aaKnown RBP15.29■□□□□ 0.04
TMEM54-206ENST00000482771 CHMP4CQ96CF2 233 aa15.29■□□□□ 0.04
TMEM54-206ENST00000482771 NKX2-4Q9H2Z4 354 aa15.29■□□□□ 0.04
TMEM54-206ENST00000482771 SLC28A3Q9HAS3 691 aa15.29■□□□□ 0.04
TMEM54-206ENST00000482771 ZNF287Q9HBT7 754 aa15.29■□□□□ 0.04
TMEM54-206ENST00000482771 ISY1Q9ULR0 285 aaKnown RBP15.29■□□□□ 0.04
TMEM54-206ENST00000482771 MUC3AQ02505 3323 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 BDP1A6H8Y1 2624 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 SOWAHBA6NEL2 793 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 RNF113AO15541 343 aaKnown RBP15.28■□□□□ 0.04
TMEM54-206ENST00000482771 DYNC1LI2O43237 492 aaPredicted RBP15.28■□□□□ 0.04
TMEM54-206ENST00000482771 TTLL1O95922 423 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 BMP3P12645 472 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 TDO2P48775 406 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 CCL23P55773 120 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 ITGA7Q13683 1181 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 FAM133AQ8N9E0 248 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 SLC43A3Q8NBI5 491 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 AGBL1Q96MI9 1066 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 AP5M1Q9H0R1 490 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 MTIF3Q9H2K0 278 aaKnown RBP15.28■□□□□ 0.04
TMEM54-206ENST00000482771 HIPK3Q9H422 1215 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 CHMP4BQ9H444 224 aaKnown RBP15.28■□□□□ 0.04
TMEM54-206ENST00000482771 ECHDC1Q9NTX5 307 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 THEGQ9P2T0 379 aa15.28■□□□□ 0.04
TMEM54-206ENST00000482771 ASTN1O14525 1302 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 GRIN2DO15399 1336 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 UMODL1Q5DID0 1318 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 PATL2C9JE40 543 aaKnown RBP15.27■□□□□ 0.04
TMEM54-206ENST00000482771 CABYRO75952 493 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 FDX1P10109 184 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 PTGS1P23219 599 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 FSCN1Q16658 493 aaKnown RBP15.27■□□□□ 0.04
TMEM54-206ENST00000482771 KBTBD3Q8NAB2 608 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 GMCL1P1Q8NEA9 526 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 ADAMTS19Q8TE59 1207 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 CHURC1Q8WUH1 139 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 APPBP2Q92624 585 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 TRPV6Q9H1D0 765 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 ACAD9Q9H845 621 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 PDGFCQ9NRA1 345 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 RAPGEFL1Q9UHV5 662 aa15.27■□□□□ 0.04
TMEM54-206ENST00000482771 GNEQ9Y223 722 aaKnown RBP15.27■□□□□ 0.04
TMEM54-206ENST00000482771 YBX2Q9Y2T7 364 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms