RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ZNF467Q7Z7K2 595 aaPredicted RBP23.38■■□□□ 1.33
MSH5-215ENST00000482280 AGBL1Q96MI9 1066 aa23.38■■□□□ 1.33
MSH5-215ENST00000482280 TRERF1Q96PN7 1200 aa23.38■■□□□ 1.33
MSH5-215ENST00000482280 GPCPD1Q9NPB8 672 aa23.38■■□□□ 1.33
MSH5-215ENST00000482280 XPNPEP3Q9NQH7 507 aa23.38■■□□□ 1.33
MSH5-215ENST00000482280 ZHX1Q9UKY1 873 aaPredicted RBP23.38■■□□□ 1.33
MSH5-215ENST00000482280 PNMA2Q9UL42 364 aa23.38■■□□□ 1.33
MSH5-215ENST00000482280 CCPG1Q9ULG6 757 aa23.38■■□□□ 1.33
MSH5-215ENST00000482280 ZMYND8Q9ULU4 1186 aaPredicted RBP23.38■■□□□ 1.33
MSH5-215ENST00000482280 NEDD4P46934 1319 aa23.37■■□□□ 1.33
MSH5-215ENST00000482280 FRMPD2Q68DX3 1309 aaPredicted RBP23.37■■□□□ 1.33
MSH5-215ENST00000482280 POTEB2H3BUK9 544 aa23.37■■□□□ 1.33
MSH5-215ENST00000482280 KDM4AO75164 1064 aa23.37■■□□□ 1.33
MSH5-215ENST00000482280 SYDE2Q5VT97 1194 aa23.37■■□□□ 1.33
MSH5-215ENST00000482280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.37■■□□□ 1.33
MSH5-215ENST00000482280 RNF180Q86T96 592 aa23.37■■□□□ 1.33
MSH5-215ENST00000482280 ZKSCAN3Q9BRR0 538 aa23.37■■□□□ 1.33
MSH5-215ENST00000482280 KAT14Q9H8E8 782 aa23.37■■□□□ 1.33
MSH5-215ENST00000482280 PRKAG2Q9UGJ0 569 aa23.37■■□□□ 1.33
MSH5-215ENST00000482280 FAM184BQ9ULE4 1060 aa23.37■■□□□ 1.33
MSH5-215ENST00000482280 DNAJC25-GNG10A0A024R161 153 aa23.36■■□□□ 1.33
MSH5-215ENST00000482280 GSPT1P15170 499 aaKnown RBP23.36■■□□□ 1.33
MSH5-215ENST00000482280 SLC16A2P36021 539 aa23.36■■□□□ 1.33
MSH5-215ENST00000482280 TRDNQ13061 729 aa23.36■■□□□ 1.33
MSH5-215ENST00000482280 DGKHQ86XP1 1220 aa23.36■■□□□ 1.33
MSH5-215ENST00000482280 UBAC1Q9BSL1 405 aa23.36■■□□□ 1.33
MSH5-215ENST00000482280 RBM27Q9P2N5 1060 aaKnown RBP23.36■■□□□ 1.33
MSH5-215ENST00000482280 ICAM1P05362 532 aa23.35■■□□□ 1.33
MSH5-215ENST00000482280 ATN1P54259 1190 aaPredicted RBP23.35■■□□□ 1.33
MSH5-215ENST00000482280 SNAP25P60880 206 aa23.35■■□□□ 1.33
MSH5-215ENST00000482280 LRRC26Q2I0M4 334 aa23.35■■□□□ 1.33
MSH5-215ENST00000482280 MAMDC4Q6UXC1 1216 aa23.35■■□□□ 1.33
MSH5-215ENST00000482280 B4E1Z4 1266 aa23.34■■□□□ 1.33
MSH5-215ENST00000482280 PDHBP11177 359 aa23.34■■□□□ 1.33
MSH5-215ENST00000482280 SYN1P17600 705 aa23.34■■□□□ 1.33
MSH5-215ENST00000482280 GPATCH4Q5T3I0 446 aaKnown RBP23.34■■□□□ 1.33
MSH5-215ENST00000482280 RASGRP2Q7LDG7 609 aa23.34■■□□□ 1.33
MSH5-215ENST00000482280 ABHD16BQ9H3Z7 469 aa23.34■■□□□ 1.33
MSH5-215ENST00000482280 SPC25Q9HBM1 224 aa23.34■■□□□ 1.33
MSH5-215ENST00000482280 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.34■■□□□ 1.33
MSH5-215ENST00000482280 ZNF536O15090 1300 aa23.33■■□□□ 1.33
MSH5-215ENST00000482280 ASB14A6NK59 587 aa23.33■■□□□ 1.33
MSH5-215ENST00000482280 ZNF865P0CJ78 1059 aaPredicted RBP23.33■■□□□ 1.33
MSH5-215ENST00000482280 LRRC41Q15345 812 aa23.33■■□□□ 1.33
MSH5-215ENST00000482280 TTBK2Q6IQ55 1244 aa23.33■■□□□ 1.33
MSH5-215ENST00000482280 BTNL9Q6UXG8 535 aa23.33■■□□□ 1.33
MSH5-215ENST00000482280 NSMFQ6X4W1 530 aa23.33■■□□□ 1.33
MSH5-215ENST00000482280 ZSCAN10Q96SZ4 725 aaPredicted RBP23.33■■□□□ 1.33
MSH5-215ENST00000482280 RANBP17Q9H2T7 1088 aaKnown RBP23.33■■□□□ 1.33
MSH5-215ENST00000482280 A1CFQ9NQ94 594 aaKnown RBP23.33■■□□□ 1.33
MSH5-215ENST00000482280 U3KPZ7 1027 aaPredicted RBP23.33■■□□□ 1.33
MSH5-215ENST00000482280 A0A1W2PPC1 479 aa23.32■■□□□ 1.32
MSH5-215ENST00000482280 TAL1P17542 331 aaPredicted RBP23.32■■□□□ 1.32
MSH5-215ENST00000482280 ZNF543Q08ER8 600 aa23.32■■□□□ 1.32
MSH5-215ENST00000482280 ACVR2BQ13705 512 aa23.32■■□□□ 1.32
MSH5-215ENST00000482280 ARMCX2Q7L311 632 aa23.32■■□□□ 1.32
MSH5-215ENST00000482280 PNMA1Q8ND90 353 aa23.32■■□□□ 1.32
MSH5-215ENST00000482280 LBHD1Q9BQE6 289 aaPredicted RBP23.32■■□□□ 1.32
MSH5-215ENST00000482280 ZNFX1Q9P2E3 1918 aaKnown RBP23.31■■□□□ 1.32
MSH5-215ENST00000482280 FRMPD3Q5JV73 1810 aa23.31■■□□□ 1.32
MSH5-215ENST00000482280 PLXNA1Q9UIW2 1896 aa23.31■■□□□ 1.32
MSH5-215ENST00000482280 SNAI1O95863 264 aaPredicted RBP23.31■■□□□ 1.32
MSH5-215ENST00000482280 PGK1P00558 417 aa23.31■■□□□ 1.32
MSH5-215ENST00000482280 CHMLP26374 656 aa23.31■■□□□ 1.32
MSH5-215ENST00000482280 ADCYAP1R1P41586 468 aa23.31■■□□□ 1.32
MSH5-215ENST00000482280 ZSWIM5Q9P217 1185 aa23.31■■□□□ 1.32
MSH5-215ENST00000482280 ATP11BQ9Y2G3 1177 aa23.31■■□□□ 1.32
MSH5-215ENST00000482280 DHX16O60231 1041 aaKnown RBP23.3■■□□□ 1.32
MSH5-215ENST00000482280 RTP1P59025 263 aa23.3■■□□□ 1.32
MSH5-215ENST00000482280 CNTN2Q02246 1040 aa23.3■■□□□ 1.32
MSH5-215ENST00000482280 KIAA1211Q6ZU35 1233 aa23.3■■□□□ 1.32
MSH5-215ENST00000482280 NOL8Q76FK4 1167 aaKnown RBP23.3■■□□□ 1.32
MSH5-215ENST00000482280 RALYLQ86SE5 291 aaKnown RBP23.3■■□□□ 1.32
MSH5-215ENST00000482280 CCDC144CPQ8IYA2 1237 aa23.3■■□□□ 1.32
MSH5-215ENST00000482280 FERMT2Q96AC1 680 aa23.3■■□□□ 1.32
MSH5-215ENST00000482280 MPHOSPH6Q99547 160 aaKnown RBP23.3■■□□□ 1.32
MSH5-215ENST00000482280 TNKSO95271 1327 aa23.3■■□□□ 1.32
MSH5-215ENST00000482280 PTPDC1A2A3K4 754 aa23.29■■□□□ 1.32
MSH5-215ENST00000482280 FXR1P51114 621 aaKnown RBP eCLIP23.29■■□□□ 1.32
MSH5-215ENST00000482280 MUM1L1Q5H9M0 696 aa23.29■■□□□ 1.32
MSH5-215ENST00000482280 IFIT1BQ5T764 474 aaKnown RBP23.29■■□□□ 1.32
MSH5-215ENST00000482280 SLC39A5Q6ZMH5 540 aa23.29■■□□□ 1.32
MSH5-215ENST00000482280 FAM133AQ8N9E0 248 aa23.29■■□□□ 1.32
MSH5-215ENST00000482280 ADD3Q9UEY8 706 aaKnown RBP23.29■■□□□ 1.32
MSH5-215ENST00000482280 ERICH2A1L162 156 aa23.28■■□□□ 1.32
MSH5-215ENST00000482280 DUSP11O75319 330 aaKnown RBP23.28■■□□□ 1.32
MSH5-215ENST00000482280 SNHG28P0DPA3 235 aa23.28■■□□□ 1.32
MSH5-215ENST00000482280 MAGEA10P43363 369 aaPredicted RBP23.28■■□□□ 1.32
MSH5-215ENST00000482280 ASPRV1Q53RT3 343 aa23.28■■□□□ 1.32
MSH5-215ENST00000482280 NUP133Q8WUM0 1156 aa23.28■■□□□ 1.32
MSH5-215ENST00000482280 UBE2OQ9C0C9 1292 aaKnown RBP23.28■■□□□ 1.32
MSH5-215ENST00000482280 CYP39A1Q9NYL5 469 aa23.28■■□□□ 1.32
MSH5-215ENST00000482280 LAMA4Q16363 1823 aa23.27■■□□□ 1.32
MSH5-215ENST00000482280 PARP1P09874 1014 aaKnown RBP23.27■■□□□ 1.32
MSH5-215ENST00000482280 GOLGA8HP0CJ92 632 aa23.27■■□□□ 1.32
MSH5-215ENST00000482280 BMP8BP34820 402 aa23.27■■□□□ 1.32
MSH5-215ENST00000482280 SART3Q15020 963 aaKnown RBP23.27■■□□□ 1.32
MSH5-215ENST00000482280 CCDC144BQ3MJ40 725 aa23.27■■□□□ 1.32
MSH5-215ENST00000482280 ENAHQ8N8S7 591 aaPredicted RBP23.27■■□□□ 1.32
MSH5-215ENST00000482280 TSEN34Q9BSV6 310 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms