RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.94■□□□□ 0.463e-7■■■□□ 18.8
RXRA-202ENST00000481739 POLR2DO15514 142 aaKnown RBP17.93■□□□□ 0.46
RXRA-202ENST00000481739 MDM2Q00987 491 aaPredicted RBP17.93■□□□□ 0.46
RXRA-202ENST00000481739 PTGDRQ13258 359 aa17.93■□□□□ 0.46
RXRA-202ENST00000481739 GPATCH4Q5T3I0 446 aaKnown RBP17.93■□□□□ 0.46
RXRA-202ENST00000481739 AOPEPQ8N6M6 819 aa17.93■□□□□ 0.46
RXRA-202ENST00000481739 GPKOWQ92917 476 aaPredicted RBP eCLIP17.93■□□□□ 0.46
RXRA-202ENST00000481739 C6orf50Q9HD87 102 aa17.93■□□□□ 0.46
RXRA-202ENST00000481739 ZNF174Q15697 407 aa17.93■□□□□ 0.46
RXRA-202ENST00000481739 SLC35G1Q2M3R5 365 aa17.93■□□□□ 0.46
RXRA-202ENST00000481739 CT47A1Q5JQC4 288 aaPredicted RBP17.93■□□□□ 0.46
RXRA-202ENST00000481739 KRT25Q7Z3Z0 450 aa17.93■□□□□ 0.46
RXRA-202ENST00000481739 DEFB129Q9H1M3 183 aa17.93■□□□□ 0.46
RXRA-202ENST00000481739 ACTN4O43707 911 aaKnown RBP17.92■□□□□ 0.46
RXRA-202ENST00000481739 LONP1P36776 959 aaKnown RBP17.92■□□□□ 0.46
RXRA-202ENST00000481739 GRIN1Q05586 938 aa17.92■□□□□ 0.46
RXRA-202ENST00000481739 PNOCQ13519 176 aa17.92■□□□□ 0.46
RXRA-202ENST00000481739 DHX8Q14562 1220 aaKnown RBP17.92■□□□□ 0.46
RXRA-202ENST00000481739 SHROOM1Q2M3G4 852 aaPredicted RBP17.92■□□□□ 0.46
RXRA-202ENST00000481739 PPP1R18Q6NYC8 613 aa17.92■□□□□ 0.46
RXRA-202ENST00000481739 USP17L2Q6R6M4 530 aa17.92■□□□□ 0.46
RXRA-202ENST00000481739 TMEM179Q6ZVK1 233 aa17.92■□□□□ 0.46
RXRA-202ENST00000481739 APOBEC3FQ8IUX4 373 aaKnown RBP17.92■□□□□ 0.46
RXRA-202ENST00000481739 LRRC47Q8N1G4 583 aaKnown RBP17.92■□□□□ 0.46
RXRA-202ENST00000481739 PIBF1Q8WXW3 757 aa17.92■□□□□ 0.46
RXRA-202ENST00000481739 ERCC4Q92889 916 aaPredicted RBP17.92■□□□□ 0.46
RXRA-202ENST00000481739 ADARB2Q9NS39 739 aaKnown RBP17.92■□□□□ 0.46
RXRA-202ENST00000481739 GGA3Q9NZ52 723 aa17.92■□□□□ 0.46
RXRA-202ENST00000481739 SMC2O95347 1197 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 SLFN14P0C7P3 912 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 HIRAP54198 1017 aaPredicted RBP17.91■□□□□ 0.46
RXRA-202ENST00000481739 NAPAP54920 295 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 SEPT2Q15019 361 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 SMARCE1Q969G3 411 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 PGAP2Q9UHJ9 254 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 PCDHA6Q9UN73 950 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 PCDHA8Q9Y5H6 950 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 PCDHA5Q9Y5H7 936 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 GREB1LQ9C091 1923 aaPredicted RBP17.91■□□□□ 0.46
RXRA-202ENST00000481739 MYH4Q9Y623 1939 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 TBC1D12O60347 775 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 GH2P01242 217 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 GOLGA8HP0CJ92 632 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 VEGFAP15692 232 aaPredicted RBP17.91■□□□□ 0.46
RXRA-202ENST00000481739 TXLNAP40222 546 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 TYW1BQ6NUM6 668 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.91■□□□□ 0.46
RXRA-202ENST00000481739 DRC7Q8IY82 874 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 MLKLQ8NB16 471 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 SPATA20Q8TB22 786 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 SYMPKQ92797 1274 aaKnown RBP17.91■□□□□ 0.46
RXRA-202ENST00000481739 KANSL2Q9H9L4 492 aa17.91■□□□□ 0.46
RXRA-202ENST00000481739 USP17L5A8MUK1 530 aa17.9■□□□□ 0.46
RXRA-202ENST00000481739 BIN1O00499 593 aa17.9■□□□□ 0.46
RXRA-202ENST00000481739 PRPHP41219 470 aa17.9■□□□□ 0.46
RXRA-202ENST00000481739 SARSP49591 514 aaKnown RBP17.9■□□□□ 0.46
RXRA-202ENST00000481739 RRP1BQ14684 758 aaKnown RBP17.9■□□□□ 0.46
RXRA-202ENST00000481739 SPECC1Q5M775 1068 aa17.9■□□□□ 0.46
RXRA-202ENST00000481739 TEPSINQ96N21 525 aa17.9■□□□□ 0.46
RXRA-202ENST00000481739 SERTAD1Q9UHV2 236 aa17.9■□□□□ 0.46
RXRA-202ENST00000481739 BAZ2BQ9UIF8 2168 aaKnown RBP17.89■□□□□ 0.45
RXRA-202ENST00000481739 RAD21O60216 631 aa17.89■□□□□ 0.45
RXRA-202ENST00000481739 NEMFO60524 1076 aa17.89■□□□□ 0.45
RXRA-202ENST00000481739 EEF2P13639 858 aaKnown RBP17.89■□□□□ 0.45
RXRA-202ENST00000481739 MCM7P33993 719 aa17.89■□□□□ 0.45
RXRA-202ENST00000481739 MYL5Q02045 173 aa17.89■□□□□ 0.45
RXRA-202ENST00000481739 ICA1Q05084 483 aa17.89■□□□□ 0.45
RXRA-202ENST00000481739 ZNF543Q08ER8 600 aa17.89■□□□□ 0.45
RXRA-202ENST00000481739 IQUBQ8NA54 791 aa17.89■□□□□ 0.45
RXRA-202ENST00000481739 NYAP2Q9P242 653 aa17.89■□□□□ 0.45
RXRA-202ENST00000481739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.88■□□□□ 0.45
RXRA-202ENST00000481739 VWA3AA6NCI4 1184 aa17.88■□□□□ 0.45
RXRA-202ENST00000481739 JAG1P78504 1218 aa17.88■□□□□ 0.45
RXRA-202ENST00000481739 NONOQ15233 471 aaKnown RBP eCLIP17.88■□□□□ 0.452e-6■■■■□ 24.9
RXRA-202ENST00000481739 SH3RF1Q7Z6J0 888 aa17.88■□□□□ 0.45
RXRA-202ENST00000481739 SPC24Q8NBT2 197 aa17.88■□□□□ 0.45
RXRA-202ENST00000481739 MKL1Q969V6 931 aa17.88■□□□□ 0.45
RXRA-202ENST00000481739 SYNPO2Q9UMS6 1093 aa17.88■□□□□ 0.45
RXRA-202ENST00000481739 SMCO2A6NFE2 343 aa17.88■□□□□ 0.45
RXRA-202ENST00000481739 WNT7AO00755 349 aa17.88■□□□□ 0.45
RXRA-202ENST00000481739 NOM1Q5C9Z4 860 aaKnown RBP17.88■□□□□ 0.45
RXRA-202ENST00000481739 NBPF12Q5TAG4 269 aaPredicted RBP17.88■□□□□ 0.45
RXRA-202ENST00000481739 RASGRP2Q7LDG7 609 aa17.88■□□□□ 0.45
RXRA-202ENST00000481739 ZC3H4Q9UPT8 1303 aaKnown RBP17.88■□□□□ 0.45
RXRA-202ENST00000481739 POLR2AP24928 1970 aaKnown RBP17.87■□□□□ 0.45
RXRA-202ENST00000481739 GLTPD2A6NH11 291 aa17.87■□□□□ 0.45
RXRA-202ENST00000481739 OFD1O75665 1012 aa17.87■□□□□ 0.45
RXRA-202ENST00000481739 NCAPHQ15003 741 aa17.87■□□□□ 0.45
RXRA-202ENST00000481739 PRAMEF18Q5VWM3 479 aa17.87■□□□□ 0.45
RXRA-202ENST00000481739 HOMER1Q86YM7 354 aa17.87■□□□□ 0.45
RXRA-202ENST00000481739 C4orf32Q8N8J7 132 aa17.87■□□□□ 0.45
RXRA-202ENST00000481739 EPSTI1Q96J88 318 aa17.87■□□□□ 0.45
RXRA-202ENST00000481739 GSDMAQ96QA5 445 aa17.87■□□□□ 0.45
RXRA-202ENST00000481739 PIGSQ96S52 555 aa17.87■□□□□ 0.45
RXRA-202ENST00000481739 GLT8D2Q9H1C3 349 aa17.87■□□□□ 0.45
RXRA-202ENST00000481739 TTC12Q9H892 705 aaPredicted RBP17.87■□□□□ 0.45
RXRA-202ENST00000481739 IMPACTQ9P2X3 320 aa17.87■□□□□ 0.45
RXRA-202ENST00000481739 PNMA6FA0A0J9YX94 578 aa17.86■□□□□ 0.45
RXRA-202ENST00000481739 SEMA3FQ13275 785 aa17.86■□□□□ 0.45
RXRA-202ENST00000481739 MORC3Q14149 939 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms