RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 ZNF536O15090 1300 aa21.98■■□□□ 1.11
HSPG2-210ENST00000481644 SNHG28P0DPA3 235 aa21.97■■□□□ 1.11
HSPG2-210ENST00000481644 CYBAP13498 195 aa21.97■■□□□ 1.11
HSPG2-210ENST00000481644 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.97■■□□□ 1.11
HSPG2-210ENST00000481644 OGDHLQ9ULD0 1010 aa21.97■■□□□ 1.11
HSPG2-210ENST00000481644 TKFCQ3LXA3 575 aa21.96■■□□□ 1.11
HSPG2-210ENST00000481644 PRPF38BQ5VTL8 546 aaKnown RBP21.96■■□□□ 1.11
HSPG2-210ENST00000481644 CYB5R4Q7L1T6 521 aa21.96■■□□□ 1.11
HSPG2-210ENST00000481644 ANKRD35Q8N283 1001 aa21.96■■□□□ 1.11
HSPG2-210ENST00000481644 TRPV1Q8NER1 839 aa21.96■■□□□ 1.11
HSPG2-210ENST00000481644 RANBP17Q9H2T7 1088 aaKnown RBP21.96■■□□□ 1.11
HSPG2-210ENST00000481644 ACAD9Q9H845 621 aa21.96■■□□□ 1.11
HSPG2-210ENST00000481644 RNF146Q9NTX7 359 aa21.96■■□□□ 1.11
HSPG2-210ENST00000481644 E7EWF7 191 aa21.95■■□□□ 1.1
HSPG2-210ENST00000481644 CENPBP07199 599 aaPredicted RBP21.95■■□□□ 1.1
HSPG2-210ENST00000481644 ALAS1P13196 640 aa21.95■■□□□ 1.1
HSPG2-210ENST00000481644 GPATCH4Q5T3I0 446 aaKnown RBP21.95■■□□□ 1.1
HSPG2-210ENST00000481644 LHX8Q68G74 356 aa21.95■■□□□ 1.1
HSPG2-210ENST00000481644 RALYLQ86SE5 291 aaKnown RBP21.95■■□□□ 1.1
HSPG2-210ENST00000481644 DIS3LQ8TF46 1054 aaKnown RBP21.95■■□□□ 1.1
HSPG2-210ENST00000481644 PAWRQ96IZ0 340 aaKnown RBP21.95■■□□□ 1.1
HSPG2-210ENST00000481644 HTATIP2Q9BUP3 242 aa21.95■■□□□ 1.1
HSPG2-210ENST00000481644 LSG1Q9H089 658 aaKnown RBP21.95■■□□□ 1.1
HSPG2-210ENST00000481644 DDX20Q9UHI6 824 aaKnown RBP21.95■■□□□ 1.1
HSPG2-210ENST00000481644 CCPG1Q9ULG6 757 aa21.95■■□□□ 1.1
HSPG2-210ENST00000481644 TAF6LQ9Y6J9 622 aa21.95■■□□□ 1.1
HSPG2-210ENST00000481644 DNAJC25-GNG10A0A024R161 153 aa21.94■■□□□ 1.1
HSPG2-210ENST00000481644 MSCO60682 206 aa21.94■■□□□ 1.1
HSPG2-210ENST00000481644 ICAM1P05362 532 aa21.94■■□□□ 1.1
HSPG2-210ENST00000481644 PRAMEF19Q5SWL8 479 aa21.94■■□□□ 1.1
HSPG2-210ENST00000481644 IFIT1BQ5T764 474 aaKnown RBP21.94■■□□□ 1.1
HSPG2-210ENST00000481644 NCOA7Q8NI08 942 aa21.94■■□□□ 1.1
HSPG2-210ENST00000481644 TRERF1Q96PN7 1200 aa21.94■■□□□ 1.1
HSPG2-210ENST00000481644 TINF2Q9BSI4 451 aa21.94■■□□□ 1.1
HSPG2-210ENST00000481644 ANO2Q9NQ90 1003 aa21.94■■□□□ 1.1
HSPG2-210ENST00000481644 GOLGA8HP0CJ92 632 aa21.93■■□□□ 1.1
HSPG2-210ENST00000481644 SEC23AQ15436 765 aa21.93■■□□□ 1.1
HSPG2-210ENST00000481644 CASC1Q6TDU7 716 aa21.93■■□□□ 1.1
HSPG2-210ENST00000481644 STOX1Q6ZVD7 989 aa21.93■■□□□ 1.1
HSPG2-210ENST00000481644 NECAB2Q7Z6G3 386 aa21.93■■□□□ 1.1
HSPG2-210ENST00000481644 DPF3Q92784 378 aa21.93■■□□□ 1.1
HSPG2-210ENST00000481644 SMCHD1A6NHR9 2005 aa21.92■■□□□ 1.1
HSPG2-210ENST00000481644 CDC45O75419 566 aa21.92■■□□□ 1.1
HSPG2-210ENST00000481644 ASPRV1Q53RT3 343 aa21.92■■□□□ 1.1
HSPG2-210ENST00000481644 MSL3Q8N5Y2 521 aaKnown RBP21.92■■□□□ 1.1
HSPG2-210ENST00000481644 NRBP1Q9UHY1 535 aa21.92■■□□□ 1.1
HSPG2-210ENST00000481644 PFASO15067 1338 aa21.91■■□□□ 1.1
HSPG2-210ENST00000481644 ERICH2A1L162 156 aa21.91■■□□□ 1.1
HSPG2-210ENST00000481644 SEPT4O43236 478 aa21.91■■□□□ 1.1
HSPG2-210ENST00000481644 TAL1P17542 331 aaPredicted RBP21.91■■□□□ 1.1
HSPG2-210ENST00000481644 MNX1P50219 401 aaPredicted RBP21.91■■□□□ 1.1
HSPG2-210ENST00000481644 MUM1L1Q5H9M0 696 aa21.91■■□□□ 1.1
HSPG2-210ENST00000481644 ZNF467Q7Z7K2 595 aaPredicted RBP21.91■■□□□ 1.1
HSPG2-210ENST00000481644 A1CFQ9NQ94 594 aaKnown RBP21.91■■□□□ 1.1
HSPG2-210ENST00000481644 SYNGAP1Q96PV0 1343 aa21.9■■□□□ 1.1
HSPG2-210ENST00000481644 IFIT3O14879 490 aaKnown RBP21.9■■□□□ 1.1
HSPG2-210ENST00000481644 PARP1P09874 1014 aaKnown RBP21.9■■□□□ 1.1
HSPG2-210ENST00000481644 SART3Q15020 963 aaKnown RBP21.9■■□□□ 1.1
HSPG2-210ENST00000481644 UBA5Q9GZZ9 404 aa21.9■■□□□ 1.1
HSPG2-210ENST00000481644 C11orf49Q9H6J7 331 aa21.9■■□□□ 1.1
HSPG2-210ENST00000481644 PNMA2Q9UL42 364 aa21.9■■□□□ 1.1
HSPG2-210ENST00000481644 CNPY2Q9Y2B0 182 aa21.9■■□□□ 1.1
HSPG2-210ENST00000481644 MCM3APO60318 1980 aa21.9■■□□□ 1.1
HSPG2-210ENST00000481644 POTEB2H3BUK9 544 aa21.89■■□□□ 1.09
HSPG2-210ENST00000481644 ANO1Q5XXA6 986 aa21.89■■□□□ 1.09
HSPG2-210ENST00000481644 MAMDC4Q6UXC1 1216 aa21.89■■□□□ 1.09
HSPG2-210ENST00000481644 CHST3Q7LGC8 479 aa21.89■■□□□ 1.09
HSPG2-210ENST00000481644 CPVLQ9H3G5 476 aa21.89■■□□□ 1.09
HSPG2-210ENST00000481644 ALPK3Q96L96 1907 aa21.88■■□□□ 1.09
HSPG2-210ENST00000481644 SLC27A2O14975 620 aa21.88■■□□□ 1.09
HSPG2-210ENST00000481644 CNTN2Q02246 1040 aa21.88■■□□□ 1.09
HSPG2-210ENST00000481644 WTAPQ15007 396 aa21.88■■□□□ 1.09
HSPG2-210ENST00000481644 CREB3L3Q68CJ9 461 aa21.88■■□□□ 1.09
HSPG2-210ENST00000481644 NSMFQ6X4W1 530 aa21.88■■□□□ 1.09
HSPG2-210ENST00000481644 MB21D2Q8IYB1 491 aaPredicted RBP21.88■■□□□ 1.09
HSPG2-210ENST00000481644 FAM133AQ8N9E0 248 aa21.88■■□□□ 1.09
HSPG2-210ENST00000481644 FGD4Q96M96 766 aa21.88■■□□□ 1.09
HSPG2-210ENST00000481644 MYH6P13533 1939 aa21.88■■□□□ 1.09
HSPG2-210ENST00000481644 WDR19Q8NEZ3 1342 aa21.87■■□□□ 1.09
HSPG2-210ENST00000481644 SNAI1O95863 264 aaPredicted RBP21.87■■□□□ 1.09
HSPG2-210ENST00000481644 NECTIN1Q15223 517 aa21.87■■□□□ 1.09
HSPG2-210ENST00000481644 ERICH6BQ5W0A0 696 aa21.87■■□□□ 1.09
HSPG2-210ENST00000481644 PPP4R2Q9NY27 417 aa21.87■■□□□ 1.09
HSPG2-210ENST00000481644 CYP39A1Q9NYL5 469 aa21.87■■□□□ 1.09
HSPG2-210ENST00000481644 LCTP09848 1927 aa21.86■■□□□ 1.09
HSPG2-210ENST00000481644 DHX16O60231 1041 aaKnown RBP21.86■■□□□ 1.09
HSPG2-210ENST00000481644 ZNF865P0CJ78 1059 aaPredicted RBP21.86■■□□□ 1.09
HSPG2-210ENST00000481644 ANTXR2P58335 489 aa21.86■■□□□ 1.09
HSPG2-210ENST00000481644 CDC37Q16543 378 aaPredicted RBP21.86■■□□□ 1.09
HSPG2-210ENST00000481644 TMEM67Q5HYA8 995 aa21.86■■□□□ 1.09
HSPG2-210ENST00000481644 ADGRF4Q8IZF3 695 aa21.86■■□□□ 1.09
HSPG2-210ENST00000481644 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.86■■□□□ 1.09
HSPG2-210ENST00000481644 SOWAHBA6NEL2 793 aa21.85■■□□□ 1.09
HSPG2-210ENST00000481644 NFIBO00712 420 aa21.85■■□□□ 1.09
HSPG2-210ENST00000481644 EVI5O60447 810 aa21.85■■□□□ 1.09
HSPG2-210ENST00000481644 COL6A1P12109 1028 aa21.85■■□□□ 1.09
HSPG2-210ENST00000481644 AKR1A1P14550 325 aa21.85■■□□□ 1.09
HSPG2-210ENST00000481644 USH1GQ495M9 461 aa21.85■■□□□ 1.09
HSPG2-210ENST00000481644 RNF20Q5VTR2 975 aa21.85■■□□□ 1.09
HSPG2-210ENST00000481644 ARMCX2Q7L311 632 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms