RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 CPXCR1Q8N123 301 aa20.83■□□□□ 0.93
RXRB-203ENST00000481441 DDRGK1Q96HY6 314 aa20.83■□□□□ 0.93
RXRB-203ENST00000481441 KATNBL1Q9H079 304 aa20.83■□□□□ 0.93
RXRB-203ENST00000481441 SLC28A3Q9HAS3 691 aa20.83■□□□□ 0.93
RXRB-203ENST00000481441 YBX2Q9Y2T7 364 aaKnown RBP20.83■□□□□ 0.93
RXRB-203ENST00000481441 F5H6K3 240 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 NDUFB10O96000 172 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 SLC4A3P48751 1232 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 KLRC3Q07444 240 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 UBE3CQ15386 1083 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 ARMCX2Q7L311 632 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 SLC43A3Q8NBI5 491 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 KIF1BPQ96EK5 621 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.82■□□□□ 0.924e-7■■■□□ 16.4
RXRB-203ENST00000481441 BOLA2Q9H3K6 86 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 NYAP2Q9P242 653 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 SLC4A4Q9Y6R1 1079 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 MYH4Q9Y623 1939 aa20.82■□□□□ 0.92
RXRB-203ENST00000481441 CCER2I3L3R5 266 aa20.81■□□□□ 0.92
RXRB-203ENST00000481441 FGBP02675 491 aa20.81■□□□□ 0.92
RXRB-203ENST00000481441 ANKRD35Q8N283 1001 aa20.81■□□□□ 0.92
RXRB-203ENST00000481441 MTIF3Q9H2K0 278 aaKnown RBP20.81■□□□□ 0.92
RXRB-203ENST00000481441 RAVER2Q9HCJ3 691 aaKnown RBP20.81■□□□□ 0.92
RXRB-203ENST00000481441 UMODL1Q5DID0 1318 aa20.81■□□□□ 0.92
RXRB-203ENST00000481441 ZBED4O75132 1171 aa20.8■□□□□ 0.92
RXRB-203ENST00000481441 ATP5JP18859 108 aa20.8■□□□□ 0.92
RXRB-203ENST00000481441 RASA1P20936 1047 aa20.8■□□□□ 0.92
RXRB-203ENST00000481441 BEX3Q00994 111 aa20.8■□□□□ 0.92
RXRB-203ENST00000481441 CCDC144CPQ8IYA2 1237 aa20.8■□□□□ 0.92
RXRB-203ENST00000481441 IL27Q8NEV9 243 aa20.8■□□□□ 0.92
RXRB-203ENST00000481441 SLC38A10Q9HBR0 1119 aa20.8■□□□□ 0.92
RXRB-203ENST00000481441 ARPP21Q9UBL0 812 aaPredicted RBP20.8■□□□□ 0.92
RXRB-203ENST00000481441 FBXO40Q9UH90 709 aa20.8■□□□□ 0.92
RXRB-203ENST00000481441 ASTN1O14525 1302 aa20.8■□□□□ 0.92
RXRB-203ENST00000481441 CXCL17Q6UXB2 119 aa20.79■□□□□ 0.92
RXRB-203ENST00000481441 OTOP2Q7RTS6 562 aa20.79■□□□□ 0.92
RXRB-203ENST00000481441 CHST13Q8NET6 341 aa20.79■□□□□ 0.92
RXRB-203ENST00000481441 HAUS7Q99871 368 aa20.79■□□□□ 0.92
RXRB-203ENST00000481441 HIPK3Q9H422 1215 aa20.79■□□□□ 0.92
RXRB-203ENST00000481441 CHD7Q9P2D1 2997 aa20.79■□□□□ 0.92
RXRB-203ENST00000481441 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.78■□□□□ 0.92
RXRB-203ENST00000481441 BMP1P13497 986 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 KIFC2Q96AC6 838 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 FAM122AQ96E09 287 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 NECAB3Q96P71 396 aaPredicted RBP20.78■□□□□ 0.92
RXRB-203ENST00000481441 PUS7LQ9H0K6 701 aaKnown RBP20.78■□□□□ 0.92
RXRB-203ENST00000481441 GRIN2DO15399 1336 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 LRRC37A2A6NM11 1700 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 RABGGTBP53611 331 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 OAZ1P54368 228 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 CNTN2Q02246 1040 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 TNFAIP2Q03169 654 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 SBK1Q52WX2 424 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 BCL11AQ9H165 835 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 TSPYL2Q9H2G4 693 aaPredicted RBP20.78■□□□□ 0.92
RXRB-203ENST00000481441 CLIP2Q9UDT6 1046 aa20.78■□□□□ 0.92
RXRB-203ENST00000481441 GNEQ9Y223 722 aaKnown RBP20.78■□□□□ 0.92
RXRB-203ENST00000481441 CTDP1Q9Y5B0 961 aaPredicted RBP20.78■□□□□ 0.92
RXRB-203ENST00000481441 IGKV6D-41A0A0C4DH26 115 aa20.77■□□□□ 0.91
RXRB-203ENST00000481441 CABYRO75952 493 aa20.77■□□□□ 0.91
RXRB-203ENST00000481441 CCL23P55773 120 aa20.77■□□□□ 0.91
RXRB-203ENST00000481441 ITGA7Q13683 1181 aa20.77■□□□□ 0.91
RXRB-203ENST00000481441 FAM133AQ8N9E0 248 aa20.77■□□□□ 0.91
RXRB-203ENST00000481441 PANK1Q8TE04 598 aa20.77■□□□□ 0.91
RXRB-203ENST00000481441 VWCEQ96DN2 955 aa20.77■□□□□ 0.91
RXRB-203ENST00000481441 NOC4LQ9BVI4 516 aaKnown RBP20.77■□□□□ 0.91
RXRB-203ENST00000481441 WNT8AQ9H1J5 351 aa20.77■□□□□ 0.91
RXRB-203ENST00000481441 FEM1BQ9UK73 627 aa20.77■□□□□ 0.91
RXRB-203ENST00000481441 PRRC2BQ5JSZ5 2229 aaKnown RBP20.76■□□□□ 0.91
RXRB-203ENST00000481441 MYOGP15173 224 aa20.76■□□□□ 0.91
RXRB-203ENST00000481441 PPP2R2DQ66LE6 453 aa20.76■□□□□ 0.91
RXRB-203ENST00000481441 SIRT2Q8IXJ6 389 aa20.76■□□□□ 0.91
RXRB-203ENST00000481441 RPAP2Q8IXW5 612 aaPredicted RBP20.76■□□□□ 0.91
RXRB-203ENST00000481441 MKL1Q969V6 931 aa20.76■□□□□ 0.91
RXRB-203ENST00000481441 C1QTNF1Q9BXJ1 281 aa20.76■□□□□ 0.91
RXRB-203ENST00000481441 MKNK2Q9HBH9 465 aa20.76■□□□□ 0.91
RXRB-203ENST00000481441 PCDHA11Q9Y5I1 949 aa20.76■□□□□ 0.91
RXRB-203ENST00000481441 RAB11FIP3O75154 756 aa20.75■□□□□ 0.91
RXRB-203ENST00000481441 TFF2Q03403 129 aa20.75■□□□□ 0.91
RXRB-203ENST00000481441 FSCN1Q16658 493 aaKnown RBP20.75■□□□□ 0.91
RXRB-203ENST00000481441 ZSCAN25Q6NSZ9 544 aa20.75■□□□□ 0.91
RXRB-203ENST00000481441 NOL8Q76FK4 1167 aaKnown RBP20.75■□□□□ 0.91
RXRB-203ENST00000481441 TLK2Q86UE8 772 aa20.75■□□□□ 0.91
RXRB-203ENST00000481441 STK11IPQ8N1F8 1099 aa20.75■□□□□ 0.91
RXRB-203ENST00000481441 STRBPQ96SI9 672 aaKnown RBP20.75■□□□□ 0.91
RXRB-203ENST00000481441 SEZ6LQ9BYH1 1024 aa20.75■□□□□ 0.91
RXRB-203ENST00000481441 TRPV6Q9H1D0 765 aa20.75■□□□□ 0.91
RXRB-203ENST00000481441 SLC4A7Q9Y6M7 1214 aa20.75■□□□□ 0.91
RXRB-203ENST00000481441 SOWAHBA6NEL2 793 aa20.74■□□□□ 0.91
RXRB-203ENST00000481441 GSG1L2A8MUP6 293 aa20.74■□□□□ 0.91
RXRB-203ENST00000481441 B4GALT4O60513 344 aa20.74■□□□□ 0.91
RXRB-203ENST00000481441 PTGS1P23219 599 aa20.74■□□□□ 0.91
RXRB-203ENST00000481441 HOMER2Q9NSB8 354 aa20.74■□□□□ 0.91
RXRB-203ENST00000481441 SYNPO2Q9UMS6 1093 aa20.74■□□□□ 0.91
RXRB-203ENST00000481441 REV3LO60673 3130 aa20.73■□□□□ 0.91
RXRB-203ENST00000481441 HMMRO75330 724 aa20.73■□□□□ 0.91
RXRB-203ENST00000481441 GIMAP6Q6P9H5 292 aa20.73■□□□□ 0.91
RXRB-203ENST00000481441 RPUSD2Q8IZ73 545 aaKnown RBP20.73■□□□□ 0.91
RXRB-203ENST00000481441 MICALL1Q8N3F8 863 aa20.73■□□□□ 0.91
RXRB-203ENST00000481441 GMCL1P1Q8NEA9 526 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms