RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCM2-214ENST00000481194 KIAA1468Q9P260 1216 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 CD2APQ9Y5K6 639 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 EEF2P13639 858 aaKnown RBP21.53■■□□□ 1.04
CCM2-214ENST00000481194 CCND2P30279 289 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 LINC00301Q8NCQ3 95 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 TCHPQ9BT92 498 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 GPHNQ9NQX3 736 aaPredicted RBP21.53■■□□□ 1.04
CCM2-214ENST00000481194 TESPA1A2RU30 521 aaPredicted RBP21.53■■□□□ 1.04
CCM2-214ENST00000481194 PHACTR2O75167 634 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 DNM2P50570 870 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 SEPT2Q15019 361 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 NEK11Q8NG66 645 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 EPB41L4AQ9HCS5 686 aaPredicted RBP21.53■■□□□ 1.04
CCM2-214ENST00000481194 STX17P56962 302 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 DDR1Q08345 913 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 IQCDQ96DY2 449 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 FAM205AQ6ZU69 1335 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 CETN3O15182 167 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 CASQ1P31415 396 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 UBXN1Q04323 297 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 NYAP2Q9P242 653 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 CNOT7Q9UIV1 285 aaKnown RBP21.52■■□□□ 1.04
CCM2-214ENST00000481194 DDX39AO00148 427 aaKnown RBP21.52■■□□□ 1.04
CCM2-214ENST00000481194 TM4SF1P30408 202 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 TBCKQ8TEA7 893 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 VTI1AQ96AJ9 217 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 FBXO40Q9UH90 709 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 TRAF5O00463 557 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 LRP10Q7Z4F1 713 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 SLC17A8Q8NDX2 589 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 SLC10A4Q96EP9 437 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 HOXC10Q9NYD6 342 aa21.52■■□□□ 1.04
CCM2-214ENST00000481194 GNA14O95837 355 aa21.52■■□□□ 1.03
CCM2-214ENST00000481194 MTERF4Q7Z6M4 381 aaKnown RBP21.52■■□□□ 1.03
CCM2-214ENST00000481194 C2orf69Q8N8R5 385 aa21.52■■□□□ 1.03
CCM2-214ENST00000481194 SLC44A5Q8NCS7 719 aa21.52■■□□□ 1.03
CCM2-214ENST00000481194 USP17L10C9JJH3 530 aa21.51■■□□□ 1.03
CCM2-214ENST00000481194 COPB2P35606 906 aa21.51■■□□□ 1.03
CCM2-214ENST00000481194 WRNIP1Q96S55 665 aa21.51■■□□□ 1.03
CCM2-214ENST00000481194 HERC4Q5GLZ8 1057 aaPredicted RBP21.51■■□□□ 1.03
CCM2-214ENST00000481194 SPZ1Q9BXG8 430 aa21.51■■□□□ 1.03
CCM2-214ENST00000481194 XRCC6P12956 609 aaKnown RBP eCLIP21.51■■□□□ 1.03
CCM2-214ENST00000481194 CNGA4Q8IV77 575 aa21.51■■□□□ 1.03
CCM2-214ENST00000481194 SYMPKQ92797 1274 aaKnown RBP21.51■■□□□ 1.03
CCM2-214ENST00000481194 KIF2CQ99661 725 aa21.51■■□□□ 1.03
CCM2-214ENST00000481194 SETQ01105 290 aaPredicted RBP21.51■■□□□ 1.03
CCM2-214ENST00000481194 ARHGEF6Q15052 776 aa21.51■■□□□ 1.03
CCM2-214ENST00000481194 SRPRBQ9Y5M8 271 aaKnown RBP21.51■■□□□ 1.03
CCM2-214ENST00000481194 FAM160B1Q5W0V3 765 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 STK17AQ9UEE5 414 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 ZNF827Q17R98 1081 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 C3orf67Q6ZVT6 689 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 LUZP1Q86V48 1076 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 VGLL2Q8N8G2 317 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 ZDHHC15Q96MV8 337 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 IFNKQ9P0W0 207 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 LMNB1P20700 586 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 KLRK1P26718 216 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 TPH2Q8IWU9 490 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 MLXIPQ9HAP2 919 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 CSGALNACT2Q8N6G5 542 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 GOLGA5Q8TBA6 731 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 COA7Q96BR5 231 aa21.5■■□□□ 1.03
CCM2-214ENST00000481194 AKR1B1P15121 316 aa21.49■■□□□ 1.03
CCM2-214ENST00000481194 SMARCA1P28370 1054 aa21.49■■□□□ 1.03
CCM2-214ENST00000481194 LRRC4BQ9NT99 713 aa21.49■■□□□ 1.03
CCM2-214ENST00000481194 BCL2L12Q9HB09 334 aa21.49■■□□□ 1.03
CCM2-214ENST00000481194 CCDC169A6NNP5 214 aa21.49■■□□□ 1.03
CCM2-214ENST00000481194 GPBP1Q86WP2 473 aa21.49■■□□□ 1.03
CCM2-214ENST00000481194 MYCT1Q8N699 235 aa21.49■■□□□ 1.03
CCM2-214ENST00000481194 IGDCC4Q8TDY8 1250 aa21.49■■□□□ 1.03
CCM2-214ENST00000481194 MTMR4Q9NYA4 1195 aa21.49■■□□□ 1.03
CCM2-214ENST00000481194 ERLIN1O75477 346 aa21.49■■□□□ 1.03
CCM2-214ENST00000481194 BEGAINQ9BUH8 593 aa21.49■■□□□ 1.03
CCM2-214ENST00000481194 AKR1B10O60218 316 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 NR1I2O75469 434 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 NUP58Q9BVL2 599 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 SPC25Q9HBM1 224 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 CBX8Q9HC52 389 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 MYOZ2Q9NPC6 264 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 BCL9LQ86UU0 1499 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 LRCH2Q5VUJ6 765 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 CSRNP2Q9H175 543 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 MMRN2Q9H8L6 949 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 BARHL2Q9NY43 387 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 TMEM63CQ9P1W3 806 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 STX10O60499 249 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 USP8P40818 1118 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 KRT83P78385 493 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 NOC4LQ9BVI4 516 aaKnown RBP21.48■■□□□ 1.03
CCM2-214ENST00000481194 ANO3Q9BYT9 981 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 HACL1Q9UJ83 578 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 DHX37Q8IY37 1157 aaKnown RBP21.48■■□□□ 1.03
CCM2-214ENST00000481194 INCENPQ9NQS7 918 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 VWA3BQ502W6 1294 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 FAM83BQ5T0W9 1011 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 LPAR1Q92633 364 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 PCDHB13Q9Y5F0 798 aa21.48■■□□□ 1.03
CCM2-214ENST00000481194 KCPQ6ZWJ8 1503 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms