RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 DNAJC25-GNG10A0A024R161 153 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 FDX1P10109 184 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 MUM1L1Q5H9M0 696 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 SYDE2Q5VT97 1194 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 BTNL9Q6UXG8 535 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 DGKHQ86XP1 1220 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 ENAHQ8N8S7 591 aaPredicted RBP15.12■□□□□ 0.01
ABCF3-215ENST00000481116 ANKLE1Q8NAG6 615 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 PNMA1Q8ND90 353 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 CHST13Q8NET6 341 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 TRERF1Q96PN7 1200 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 TINF2Q9BSI4 451 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 HTATIP2Q9BUP3 242 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 RNF146Q9NTX7 359 aa15.12■□□□□ 0.01
ABCF3-215ENST00000481116 H0YGN5 161 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 SNHG28P0DPA3 235 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 CAPN2P17655 700 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 CNTN2Q02246 1040 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 MAP4K1Q92918 833 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 FGD4Q96M96 766 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 UBA5Q9GZZ9 404 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 RANBP17Q9H2T7 1088 aaKnown RBP15.11■□□□□ 0.01
ABCF3-215ENST00000481116 C11orf49Q9H6J7 331 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 ACAD9Q9H845 621 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 KAT14Q9H8E8 782 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 CNNM2Q9H8M5 875 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 CCPG1Q9ULG6 757 aa15.11■□□□□ 0.01
ABCF3-215ENST00000481116 DIS3Q9Y2L1 958 aaKnown RBP15.11■□□□□ 0.01
ABCF3-215ENST00000481116 RBM8AQ9Y5S9 174 aaKnown RBP15.11■□□□□ 0.01
ABCF3-215ENST00000481116 U3KPZ7 1027 aaPredicted RBP15.11■□□□□ 0.01
ABCF3-215ENST00000481116 E7EWF7 191 aa15.1■□□□□ 0.01
ABCF3-215ENST00000481116 CCDC178Q5BJE1 867 aa15.1■□□□□ 0.01
ABCF3-215ENST00000481116 STOX1Q6ZVD7 989 aa15.1■□□□□ 0.01
ABCF3-215ENST00000481116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.1■□□□□ 0.01
ABCF3-215ENST00000481116 CHST3Q7LGC8 479 aa15.1■□□□□ 0.01
ABCF3-215ENST00000481116 ANKS1AQ92625 1134 aa15.1■□□□□ 0.01
ABCF3-215ENST00000481116 ESYT1Q9BSJ8 1104 aa15.1■□□□□ 0.01
ABCF3-215ENST00000481116 LSG1Q9H089 658 aaKnown RBP15.1■□□□□ 0.01
ABCF3-215ENST00000481116 A1CFQ9NQ94 594 aaKnown RBP15.1■□□□□ 0.01
ABCF3-215ENST00000481116 FBXO40Q9UH90 709 aa15.1■□□□□ 0.01
ABCF3-215ENST00000481116 PFASO15067 1338 aa15.1■□□□□ 0.01
ABCF3-215ENST00000481116 LRRC37A2A6NM11 1700 aa15.09■□□□□ 0.01
ABCF3-215ENST00000481116 SEPT4O43236 478 aa15.09■□□□□ 0.01
ABCF3-215ENST00000481116 SNAI1O95863 264 aaPredicted RBP15.09■□□□□ 0.01
ABCF3-215ENST00000481116 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
ABCF3-215ENST00000481116 ICAM1P05362 532 aa15.09■□□□□ 0.01
ABCF3-215ENST00000481116 SEC23AQ15436 765 aa15.09■□□□□ 0.01
ABCF3-215ENST00000481116 BMP2KLQ5H9B9 411 aa15.09■□□□□ 0.01
ABCF3-215ENST00000481116 GJC2Q5T442 439 aaPredicted RBP15.09■□□□□ 0.01
ABCF3-215ENST00000481116 LENG1Q96BZ8 264 aaPredicted RBP15.09■□□□□ 0.01
ABCF3-215ENST00000481116 PURBQ96QR8 312 aaKnown RBP15.09■□□□□ 0.01
ABCF3-215ENST00000481116 UBAC1Q9BSL1 405 aa15.09■□□□□ 0.01
ABCF3-215ENST00000481116 SENP2Q9HC62 589 aa15.09■□□□□ 0.01
ABCF3-215ENST00000481116 PCDH10Q9P2E7 1040 aa15.09■□□□□ 0.01
ABCF3-215ENST00000481116 DDX49Q9Y6V7 483 aaKnown RBP15.09■□□□□ 0.01
ABCF3-215ENST00000481116 BAZ2BQ9UIF8 2168 aaKnown RBP15.09■□□□□ 0.01
ABCF3-215ENST00000481116 EVI5O60447 810 aa15.08■□□□□ 0
ABCF3-215ENST00000481116 MSCO60682 206 aa15.08■□□□□ 0
ABCF3-215ENST00000481116 ZNF865P0CJ78 1059 aaPredicted RBP15.08■□□□□ 0
ABCF3-215ENST00000481116 TRDNQ13061 729 aa15.08■□□□□ 0
ABCF3-215ENST00000481116 TKFCQ3LXA3 575 aa15.08■□□□□ 0
ABCF3-215ENST00000481116 IFIT1BQ5T764 474 aaKnown RBP15.08■□□□□ 0
ABCF3-215ENST00000481116 NSMFQ6X4W1 530 aa15.08■□□□□ 0
ABCF3-215ENST00000481116 KIAA1211Q6ZU35 1233 aa15.08■□□□□ 0
ABCF3-215ENST00000481116 CEP290O15078 2479 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 DNAH12Q6ZR08 3092 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 SOWAHBA6NEL2 793 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 POTEB2H3BUK9 544 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 NFIBO00712 420 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 COL6A1P12109 1028 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 NT5C2P49902 561 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 COL9A3Q14050 684 aaPredicted RBP15.07■□□□□ 0
ABCF3-215ENST00000481116 GPATCH4Q5T3I0 446 aaKnown RBP15.07■□□□□ 0
ABCF3-215ENST00000481116 MAMDC4Q6UXC1 1216 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 C7orf61Q8IZ16 206 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 STAG2Q8N3U4 1231 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 FAM133AQ8N9E0 248 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 NCOA7Q8NI08 942 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 SENP6Q9GZR1 1112 aaPredicted RBP15.07■□□□□ 0
ABCF3-215ENST00000481116 CYP39A1Q9NYL5 469 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 ZHX1Q9UKY1 873 aaPredicted RBP15.07■□□□□ 0
ABCF3-215ENST00000481116 CNPY2Q9Y2B0 182 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 ASTN1O14525 1302 aa15.07■□□□□ 0
ABCF3-215ENST00000481116 IFIT3O14879 490 aaKnown RBP15.06■□□□□ 0
ABCF3-215ENST00000481116 NEFLP07196 543 aa15.06■□□□□ 0
ABCF3-215ENST00000481116 ANTXR2P58335 489 aa15.06■□□□□ 0
ABCF3-215ENST00000481116 LRRC26Q2I0M4 334 aa15.06■□□□□ 0
ABCF3-215ENST00000481116 USH1GQ495M9 461 aa15.06■□□□□ 0
ABCF3-215ENST00000481116 ARMCX2Q7L311 632 aa15.06■□□□□ 0
ABCF3-215ENST00000481116 ZNF467Q7Z7K2 595 aaPredicted RBP15.06■□□□□ 0
ABCF3-215ENST00000481116 RALYLQ86SE5 291 aaKnown RBP15.06■□□□□ 0
ABCF3-215ENST00000481116 CCDC144CPQ8IYA2 1237 aa15.06■□□□□ 0
ABCF3-215ENST00000481116 ADGRF4Q8IZF3 695 aa15.06■□□□□ 0
ABCF3-215ENST00000481116 VAT1LQ9HCJ6 419 aa15.06■□□□□ 0
ABCF3-215ENST00000481116 ANO2Q9NQ90 1003 aa15.06■□□□□ 0
ABCF3-215ENST00000481116 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.06■□□□□ 0
ABCF3-215ENST00000481116 SYNGAP1Q96PV0 1343 aa15.06■□□□□ 0
ABCF3-215ENST00000481116 SLC27A2O14975 620 aa15.05■□□□□ -0
ABCF3-215ENST00000481116 ADCY6O43306 1168 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms