RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 PSME4Q14997 1843 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 AKAP11Q9UKA4 1901 aa8.3□□□□□ -1.08
LRCH3-216ENST00000481048 THSD7BQ9C0I4 1608 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 TM4SF5O14894 197 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 ZBTB39O15060 712 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 PDE8AO60658 829 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 COBLO75128 1261 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 RAD17O75943 681 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 KIF4AO95239 1232 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 CELF2O95319 508 aaKnown RBP8.29□□□□□ -1.08
LRCH3-216ENST00000481048 PCCAP05165 728 aaPredicted RBP8.29□□□□□ -1.08
LRCH3-216ENST00000481048 CYP2E1P05181 493 aaPredicted RBP8.29□□□□□ -1.08
LRCH3-216ENST00000481048 HSPA8P11142 646 aaKnown RBP8.29□□□□□ -1.08
LRCH3-216ENST00000481048 DUOXA2Q1HG44 320 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 CCDC152Q4G0S7 254 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 KIAA1211Q6ZU35 1233 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 KLHL23Q8NBE8 558 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 CELF1Q92879 486 aaKnown RBP8.29□□□□□ -1.08
LRCH3-216ENST00000481048 ZC3H12CQ9C0D7 883 aaKnown RBP8.29□□□□□ -1.08
LRCH3-216ENST00000481048 POLLQ9UGP5 575 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 SCN9AQ15858 1988 aa8.29□□□□□ -1.08
LRCH3-216ENST00000481048 DUOX1Q9NRD9 1551 aa8.28□□□□□ -1.08
LRCH3-216ENST00000481048 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-216ENST00000481048 TRAF5O00463 557 aa8.28□□□□□ -1.08
LRCH3-216ENST00000481048 PSMD14O00487 310 aa8.28□□□□□ -1.08
LRCH3-216ENST00000481048 VIL1P09327 827 aaKnown RBP8.28□□□□□ -1.08
LRCH3-216ENST00000481048 EPHA1P21709 976 aa8.28□□□□□ -1.08
LRCH3-216ENST00000481048 GPSM2P81274 684 aa8.28□□□□□ -1.08
LRCH3-216ENST00000481048 CCDC27Q2M243 656 aa8.28□□□□□ -1.08
LRCH3-216ENST00000481048 UVSSAQ2YD98 709 aa8.28□□□□□ -1.08
LRCH3-216ENST00000481048 CYP4F22Q6NT55 531 aa8.28□□□□□ -1.08
LRCH3-216ENST00000481048 CEP120Q8N960 986 aa8.28□□□□□ -1.08
LRCH3-216ENST00000481048 TBC1D16Q8TBP0 767 aa8.28□□□□□ -1.08
LRCH3-216ENST00000481048 METTL22Q9BUU2 404 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-216ENST00000481048 PHAXQ9H814 394 aaKnown RBP8.28□□□□□ -1.08
LRCH3-216ENST00000481048 GOLGA2P5Q9HBQ8 144 aa8.28□□□□□ -1.08
LRCH3-216ENST00000481048 CWC25Q9NXE8 425 aaPredicted RBP8.28□□□□□ -1.08
LRCH3-216ENST00000481048 DDX3YO15523 660 aaKnown RBP8.27□□□□□ -1.09
LRCH3-216ENST00000481048 ECE2O60344 883 aa8.27□□□□□ -1.09
LRCH3-216ENST00000481048 PTPRAP18433 802 aa8.27□□□□□ -1.09
LRCH3-216ENST00000481048 MMP14P50281 582 aa8.27□□□□□ -1.09
LRCH3-216ENST00000481048 FMR1Q06787 632 aaKnown RBP eCLIP8.27□□□□□ -1.09
LRCH3-216ENST00000481048 NFIAQ12857 509 aa8.27□□□□□ -1.09
LRCH3-216ENST00000481048 TMEM164Q5U3C3 297 aa8.27□□□□□ -1.09
LRCH3-216ENST00000481048 KSR2Q6VAB6 950 aa8.27□□□□□ -1.09
LRCH3-216ENST00000481048 TRIM42Q8IWZ5 723 aa8.27□□□□□ -1.09
LRCH3-216ENST00000481048 AGBL3Q8NEM8 1001 aa8.27□□□□□ -1.09
LRCH3-216ENST00000481048 FAM46AQ96IP4 442 aaKnown RBP8.27□□□□□ -1.09
LRCH3-216ENST00000481048 MYD88Q99836 296 aa8.27□□□□□ -1.09
LRCH3-216ENST00000481048 GLIS2Q9BZE0 524 aaPredicted RBP8.27□□□□□ -1.09
LRCH3-216ENST00000481048 DBNDD1Q9H9R9 158 aa8.27□□□□□ -1.09
LRCH3-216ENST00000481048 HMX2A2RU54 273 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 ELL2O00472 640 aaPredicted RBP8.26□□□□□ -1.09
LRCH3-216ENST00000481048 ATP2B4P23634 1241 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 NEXNQ0ZGT2 675 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 NOGQ13253 232 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 KRT26Q7Z3Y9 468 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 KRTAP19-1Q8IUB9 90 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 ZDHHC13Q8IUH4 622 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 ANKRD18AQ8IVF6 992 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 C8orf58Q8NAV2 365 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 UBASH3BQ8TF42 649 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 FOXD4L4Q8WXT5 416 aaPredicted RBP8.26□□□□□ -1.09
LRCH3-216ENST00000481048 DCPSQ96C86 337 aaKnown RBP8.26□□□□□ -1.09
LRCH3-216ENST00000481048 KLHDC7BQ96G42 594 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 CDC5LQ99459 802 aaKnown RBP8.26□□□□□ -1.09
LRCH3-216ENST00000481048 POP1Q99575 1024 aaKnown RBP8.26□□□□□ -1.09
LRCH3-216ENST00000481048 STK31Q9BXU1 1019 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 C7orf69Q9H7B7 122 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 SEC31BQ9NQW1 1179 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 PDE4DIPQ5VU43 2346 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 ZNF609O15014 1411 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 XDHP47989 1333 aa8.26□□□□□ -1.09
LRCH3-216ENST00000481048 KIAA1324LA8MWY0 1029 aaPredicted RBP8.25□□□□□ -1.09
LRCH3-216ENST00000481048 PAX4O43316 350 aa8.25□□□□□ -1.09
LRCH3-216ENST00000481048 ADAM11O75078 769 aa8.25□□□□□ -1.09
LRCH3-216ENST00000481048 ATG7O95352 703 aa8.25□□□□□ -1.09
LRCH3-216ENST00000481048 IRAK1P51617 712 aa8.25□□□□□ -1.09
LRCH3-216ENST00000481048 RNF43Q68DV7 783 aa8.25□□□□□ -1.09
LRCH3-216ENST00000481048 PDE12Q6L8Q7 609 aaKnown RBP8.25□□□□□ -1.09
LRCH3-216ENST00000481048 USP48Q86UV5 1035 aa8.25□□□□□ -1.09
LRCH3-216ENST00000481048 C2orf69Q8N8R5 385 aa8.25□□□□□ -1.09
LRCH3-216ENST00000481048 MYRFLQ96LU7 910 aa8.25□□□□□ -1.09
LRCH3-216ENST00000481048 BSDC1Q9NW68 430 aaPredicted RBP8.25□□□□□ -1.09
LRCH3-216ENST00000481048 TMEM63CQ9P1W3 806 aa8.25□□□□□ -1.09
LRCH3-216ENST00000481048 KANSL3Q9P2N6 904 aa8.25□□□□□ -1.09
LRCH3-216ENST00000481048 OAS3Q9Y6K5 1087 aaKnown RBP8.25□□□□□ -1.09
LRCH3-216ENST00000481048 IL16Q14005 1332 aa8.25□□□□□ -1.09
LRCH3-216ENST00000481048 RTL9Q8NET4 1388 aa8.24□□□□□ -1.09
LRCH3-216ENST00000481048 PI4KAP2A4QPH2 592 aa8.24□□□□□ -1.09
LRCH3-216ENST00000481048 UFL1O94874 794 aa8.24□□□□□ -1.09
LRCH3-216ENST00000481048 GP2P55259 537 aaKnown RBP8.24□□□□□ -1.09
LRCH3-216ENST00000481048 HUNKP57058 714 aa8.24□□□□□ -1.09
LRCH3-216ENST00000481048 ZNF280AP59817 542 aaPredicted RBP8.24□□□□□ -1.09
LRCH3-216ENST00000481048 FKBP1BP68106 108 aa8.24□□□□□ -1.09
LRCH3-216ENST00000481048 GRM1Q13255 1194 aa8.24□□□□□ -1.09
LRCH3-216ENST00000481048 KIF4BQ2VIQ3 1234 aa8.24□□□□□ -1.09
LRCH3-216ENST00000481048 TBC1D10BQ4KMP7 808 aaPredicted RBP8.24□□□□□ -1.09
LRCH3-216ENST00000481048 RGMBQ6NW40 437 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms