RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 PDE1CQ14123 709 aaPredicted RBP10.43□□□□□ -0.74
VEGFA-212ENST00000480614 JAG2Q9Y219 1238 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 LIG4P49917 911 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 ANAPC5Q9UJX4 755 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 TTI1O43156 1089 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 TFDP1Q14186 410 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 USH1GQ495M9 461 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 SRRM1Q8IYB3 904 aaKnown RBP10.43□□□□□ -0.74
VEGFA-212ENST00000480614 FLAD1Q8NFF5 587 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 TBC1D7Q9P0N9 293 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 NXNQ6DKJ4 435 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 TRIM35Q9UPQ4 493 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 MAPK8IP1Q9UQF2 711 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 SPDYE16A6NNV3 312 aaPredicted RBP10.43□□□□□ -0.74
VEGFA-212ENST00000480614 ESRRGP62508 458 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 SPDYE2Q495Y8 402 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 PRPF38AQ8NAV1 312 aaKnown RBP10.43□□□□□ -0.74
VEGFA-212ENST00000480614 OR52Z1P0C646 297 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 DMTNQ08495 405 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 ANKRD20A4Q4UJ75 823 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 ANKRD20A8PQ5CZ79 823 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 ANKRD20A2Q5SQ80 823 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 ANKRD20A1Q5TYW2 823 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 TTC25Q96NG3 672 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 JPH2Q9BR39 696 aaPredicted RBP10.43□□□□□ -0.74
VEGFA-212ENST00000480614 KRT40Q6A162 431 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 HDAC11Q96DB2 347 aa10.43□□□□□ -0.74
VEGFA-212ENST00000480614 MYH6P13533 1939 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 POLR2MP0CAP2 368 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 ZNF790Q6PG37 636 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 LMTK3Q96Q04 1460 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 DDAH1O94760 285 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 FOSP01100 380 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-212ENST00000480614 PPP1R9AQ9ULJ8 1098 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 SLF1Q9BQI6 1058 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 A6NJR5 290 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 K7ENM7 598 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 XPAP23025 273 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-212ENST00000480614 IL9RQ01113 521 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 DACT3Q96B18 629 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-212ENST00000480614 TUBB6Q9BUF5 446 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 FAM207AQ9NSI2 230 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-212ENST00000480614 ZMYM6O95789 1325 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 HOXC9P31274 260 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 SKA2Q8WVK7 121 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-212ENST00000480614 RABEP2Q9H5N1 569 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 A0A1W2PP64 1363 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 STX1BP61266 288 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 STAG1Q8WVM7 1258 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 ZNF500O60304 480 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-212ENST00000480614 C10orf76Q5T2E6 689 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 NOSTRINQ8IVI9 506 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 POMGNT1Q8WZA1 660 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 TRIM4Q9C037 500 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 CNOT10Q9H9A5 744 aaKnown RBP10.42□□□□□ -0.74
VEGFA-212ENST00000480614 POLKQ9UBT6 870 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 STK17AQ9UEE5 414 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 JRKLQ9Y4A0 524 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 INSRP06213 1382 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 ATP7AQ04656 1500 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 ADALQ6DHV7 355 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 U2AF1L4Q8WU68 220 aaKnown RBP10.42□□□□□ -0.74
VEGFA-212ENST00000480614 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 RNF8O76064 485 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 ECE1P42892 770 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 CEBPAP49715 358 aaPredicted RBP10.42□□□□□ -0.74
VEGFA-212ENST00000480614 DLGAP5Q15398 846 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 MGARPQ8TDB4 240 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 SLC12A6Q9UHW9 1150 aa10.42□□□□□ -0.74
VEGFA-212ENST00000480614 CFBP00751 764 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 HSPA6P17066 643 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 FAM102BQ5T8I3 360 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 PDZD8Q8NEN9 1154 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 WDR17Q8IZU2 1322 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 SMIM24O75264 130 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 NRBF2Q96F24 287 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 EFCC1Q9HA90 598 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 LRCH2Q5VUJ6 765 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 XAB2Q9HCS7 855 aaKnown RBP10.41□□□□□ -0.74
VEGFA-212ENST00000480614 ADAMTS12P58397 1594 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 GTPBP6O43824 516 aaPredicted RBP10.41□□□□□ -0.74
VEGFA-212ENST00000480614 TXLNGQ9NUQ3 528 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 HMGB3O15347 200 aaKnown RBP10.41□□□□□ -0.74
VEGFA-212ENST00000480614 CYP2J2P51589 502 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 CDR2Q01850 454 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 SNCBQ16143 134 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 ELMSAN1Q6PJG2 1045 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 BFSP1Q12934 665 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 SKAP1Q86WV1 359 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 MED23Q9ULK4 1368 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 MYL1P05976 194 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 ATP2B4P23634 1241 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 ICE1Q9Y2F5 2266 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 SMCO2A6NFE2 343 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 CACTINQ8WUQ7 758 aaKnown RBP10.41□□□□□ -0.74
VEGFA-212ENST00000480614 ST7Q9NRC1 585 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 KCNK3O14649 394 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 U2AF2P26368 475 aaKnown RBP eCLIP10.41□□□□□ -0.742e-48■□□□□ 11.2
VEGFA-212ENST00000480614 RETREG2Q8NC44 543 aa10.41□□□□□ -0.74
VEGFA-212ENST00000480614 WDR62O43379 1518 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms