RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 EHD4Q9H223 541 aa19.04■□□□□ 0.64
SH3D21-203ENST00000480549 LCMT1Q9UIC8 334 aa19.04■□□□□ 0.64
SH3D21-203ENST00000480549 BMP6P22004 513 aa19.03■□□□□ 0.64
SH3D21-203ENST00000480549 C4orf32Q8N8J7 132 aa19.03■□□□□ 0.64
SH3D21-203ENST00000480549 NRBP1Q9UHY1 535 aa19.03■□□□□ 0.64
SH3D21-203ENST00000480549 SLURP2P0DP57 97 aa19.03■□□□□ 0.64
SH3D21-203ENST00000480549 SNHG28P0DPA3 235 aa19.03■□□□□ 0.64
SH3D21-203ENST00000480549 FAM193AP78312 1265 aa19.03■□□□□ 0.64
SH3D21-203ENST00000480549 IL17AQ16552 155 aa19.03■□□□□ 0.64
SH3D21-203ENST00000480549 CREBRFQ8IUR6 639 aa19.03■□□□□ 0.64
SH3D21-203ENST00000480549 MYO1CO00159 1063 aa19.03■□□□□ 0.64
SH3D21-203ENST00000480549 MCM7P33993 719 aa19.03■□□□□ 0.64
SH3D21-203ENST00000480549 SARSP49591 514 aaKnown RBP19.03■□□□□ 0.64
SH3D21-203ENST00000480549 LRRC47Q8N1G4 583 aaKnown RBP19.03■□□□□ 0.64
SH3D21-203ENST00000480549 DNAJC18Q9H819 358 aa19.03■□□□□ 0.64
SH3D21-203ENST00000480549 HLA-DOAP06340 250 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 CACNB3P54284 484 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 GRAMD1CQ8IYS0 662 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 IDI2Q9BXS1 227 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 ZMYND12Q9H0C1 365 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 RIOX1Q9H6W3 641 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 CLIP2Q9UDT6 1046 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 FAM198AQ9UFP1 575 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 HOOK1Q9UJC3 728 aaKnown RBP19.02■□□□□ 0.64
SH3D21-203ENST00000480549 VWA3AA6NCI4 1184 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 IKBKBO14920 756 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 CASQ1P31415 396 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 CC2D2BQ6DHV5 1058 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 HSD3B7Q9H2F3 369 aa19.02■□□□□ 0.64
SH3D21-203ENST00000480549 EIF6P56537 245 aaKnown RBP19.01■□□□□ 0.63
SH3D21-203ENST00000480549 CEP135Q66GS9 1140 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 BANK1Q8NDB2 785 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 RRP36Q96EU6 259 aaKnown RBP19.01■□□□□ 0.63
SH3D21-203ENST00000480549 SERPINA10Q9UK55 444 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 MAN1B1Q9UKM7 699 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 YDJCA8MPS7 323 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 TTLL1O95922 423 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 SPATA20Q8TB22 786 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 PIGSQ96S52 555 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 FRMPD2Q68DX3 1309 aaPredicted RBP19.01■□□□□ 0.63
SH3D21-203ENST00000480549 CCDC144BQ3MJ40 725 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 KANK3Q6NY19 840 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 HOMER1Q86YM7 354 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 UBA5Q9GZZ9 404 aa19.01■□□□□ 0.63
SH3D21-203ENST00000480549 C21orf2O43822 256 aa19■□□□□ 0.63
SH3D21-203ENST00000480549 ASPRV1Q53RT3 343 aa19■□□□□ 0.63
SH3D21-203ENST00000480549 SH3BP5LQ7L8J4 393 aa19■□□□□ 0.63
SH3D21-203ENST00000480549 SH3RF1Q7Z6J0 888 aa19■□□□□ 0.63
SH3D21-203ENST00000480549 DHX58Q96C10 678 aa19■□□□□ 0.63
SH3D21-203ENST00000480549 CCDC194A0A1B0GVG4 234 aa19■□□□□ 0.63
SH3D21-203ENST00000480549 DDTLA6NHG4 134 aaPredicted RBP19■□□□□ 0.63
SH3D21-203ENST00000480549 BMS1Q14692 1282 aaKnown RBP19■□□□□ 0.63
SH3D21-203ENST00000480549 SUPT20HQ8NEM7 779 aa19■□□□□ 0.63
SH3D21-203ENST00000480549 DRC1Q96MC2 740 aa19■□□□□ 0.63
SH3D21-203ENST00000480549 NCAPGQ9BPX3 1015 aa19■□□□□ 0.63
SH3D21-203ENST00000480549 NAPAP54920 295 aa18.99■□□□□ 0.63
SH3D21-203ENST00000480549 TCP10Q12799 353 aa18.99■□□□□ 0.63
SH3D21-203ENST00000480549 ARL6IP4Q66PJ3 421 aaKnown RBP18.99■□□□□ 0.63
SH3D21-203ENST00000480549 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
SH3D21-203ENST00000480549 KIF13BQ9NQT8 1826 aa18.99■□□□□ 0.63
SH3D21-203ENST00000480549 NPM3O75607 178 aaKnown RBP18.99■□□□□ 0.63
SH3D21-203ENST00000480549 RBM5P52756 815 aaKnown RBP eCLIP18.99■□□□□ 0.631e-7■■■□□ 18.2
SH3D21-203ENST00000480549 DHX36Q9H2U1 1008 aaKnown RBP18.99■□□□□ 0.63
SH3D21-203ENST00000480549 VAT1LQ9HCJ6 419 aa18.99■□□□□ 0.63
SH3D21-203ENST00000480549 MORC3Q14149 939 aa18.99■□□□□ 0.63
SH3D21-203ENST00000480549 INF2Q27J81 1249 aa18.99■□□□□ 0.63
SH3D21-203ENST00000480549 CCDC12Q8WUD4 166 aaPredicted RBP18.99■□□□□ 0.63
SH3D21-203ENST00000480549 SEC63Q9UGP8 760 aaKnown RBP18.99■□□□□ 0.63
SH3D21-203ENST00000480549 PPIP5K2O43314 1243 aa18.98■□□□□ 0.63
SH3D21-203ENST00000480549 CT47A1Q5JQC4 288 aaPredicted RBP18.98■□□□□ 0.63
SH3D21-203ENST00000480549 DEFB132Q7Z7B7 95 aa18.98■□□□□ 0.63
SH3D21-203ENST00000480549 SMARCE1Q969G3 411 aa18.98■□□□□ 0.63
SH3D21-203ENST00000480549 E2F4Q16254 413 aa18.98■□□□□ 0.63
SH3D21-203ENST00000480549 TEX35Q5T0J7 233 aa18.98■□□□□ 0.63
SH3D21-203ENST00000480549 COL4A5P29400 1685 aa18.98■□□□□ 0.63
SH3D21-203ENST00000480549 SMCO2A6NFE2 343 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 ZNF543Q08ER8 600 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 PAGE5Q96GU1 130 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 CCDC17Q96LX7 622 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 FAM196BA6NMK8 535 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 MYL5Q02045 173 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 TRIML1Q8N9V2 468 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 BCCIPQ9P287 314 aaKnown RBP eCLIP18.97■□□□□ 0.63
SH3D21-203ENST00000480549 ESYT2A0FGR8 921 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 TXLNBQ8N3L3 684 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 TMEM60Q9H2L4 133 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 C6orf50Q9HD87 102 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 PI4KBQ9UBF8 816 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
SH3D21-203ENST00000480549 MPHOSPH10O00566 681 aaKnown RBP18.96■□□□□ 0.63
SH3D21-203ENST00000480549 KCNA3P22001 575 aa18.96■□□□□ 0.63
SH3D21-203ENST00000480549 SHROOM1Q2M3G4 852 aaPredicted RBP18.96■□□□□ 0.63
SH3D21-203ENST00000480549 GPCPD1Q9NPB8 672 aa18.96■□□□□ 0.63
SH3D21-203ENST00000480549 hCG_1984214I3L0E3 225 aa18.96■□□□□ 0.63
SH3D21-203ENST00000480549 GNA11P29992 359 aa18.96■□□□□ 0.63
SH3D21-203ENST00000480549 LONP1P36776 959 aaKnown RBP18.96■□□□□ 0.63
SH3D21-203ENST00000480549 TPM4P67936 248 aa18.96■□□□□ 0.63
SH3D21-203ENST00000480549 TTLL6Q8N841 843 aa18.96■□□□□ 0.63
SH3D21-203ENST00000480549 ZNF713Q8N859 430 aaPredicted RBP18.96■□□□□ 0.63
SH3D21-203ENST00000480549 LMOD1P29536 600 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms