RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 TOMM70O94826 608 aa20.22■□□□□ 0.83
UPF3A-206ENST00000480362 CALML3P27482 149 aa20.22■□□□□ 0.83
UPF3A-206ENST00000480362 KRT2P35908 639 aa20.22■□□□□ 0.83
UPF3A-206ENST00000480362 HUNKP57058 714 aa20.22■□□□□ 0.83
UPF3A-206ENST00000480362 TREML2Q5T2D2 321 aa20.22■□□□□ 0.83
UPF3A-206ENST00000480362 FAM173BQ6P4H8 233 aa20.22■□□□□ 0.83
UPF3A-206ENST00000480362 FBXO11Q86XK2 927 aa20.22■□□□□ 0.83
UPF3A-206ENST00000480362 PROCA1Q8NCQ7 364 aaPredicted RBP20.22■□□□□ 0.83
UPF3A-206ENST00000480362 OXER1Q8TDS5 423 aa20.22■□□□□ 0.83
UPF3A-206ENST00000480362 CHAMP1Q96JM3 812 aa20.22■□□□□ 0.83
UPF3A-206ENST00000480362 PCDHA1Q9Y5I3 950 aa20.22■□□□□ 0.83
UPF3A-206ENST00000480362 SMCO2A6NFE2 343 aa20.21■□□□□ 0.83
UPF3A-206ENST00000480362 BAG4O95429 457 aaKnown RBP20.21■□□□□ 0.83
UPF3A-206ENST00000480362 U2AF2P26368 475 aaKnown RBP eCLIP20.21■□□□□ 0.834e-7■■■■■ 39.1
UPF3A-206ENST00000480362 DSG3P32926 999 aa20.21■□□□□ 0.83
UPF3A-206ENST00000480362 SNAPC2Q13487 334 aa20.21■□□□□ 0.83
UPF3A-206ENST00000480362 COG2Q14746 738 aa20.21■□□□□ 0.83
UPF3A-206ENST00000480362 NPY5RQ15761 445 aa20.21■□□□□ 0.83
UPF3A-206ENST00000480362 CCDC174Q6PII3 467 aa20.21■□□□□ 0.83
UPF3A-206ENST00000480362 CLEC17AQ6ZS10 378 aa20.21■□□□□ 0.83
UPF3A-206ENST00000480362 ZMYND12Q9H0C1 365 aa20.21■□□□□ 0.83
UPF3A-206ENST00000480362 FOXP1Q9H334 677 aaPredicted RBP20.21■□□□□ 0.83
UPF3A-206ENST00000480362 BRMS1Q9HCU9 246 aa20.21■□□□□ 0.83
UPF3A-206ENST00000480362 NR5A1Q13285 461 aa20.2■□□□□ 0.82
UPF3A-206ENST00000480362 MOGSQ13724 837 aa20.2■□□□□ 0.82
UPF3A-206ENST00000480362 GALNT17Q6IS24 598 aa20.2■□□□□ 0.82
UPF3A-206ENST00000480362 PPP1R18Q6NYC8 613 aa20.2■□□□□ 0.82
UPF3A-206ENST00000480362 FASTKD5Q7L8L6 764 aaKnown RBP20.2■□□□□ 0.82
UPF3A-206ENST00000480362 BRAPQ7Z569 592 aa20.2■□□□□ 0.82
UPF3A-206ENST00000480362 BLIDQ8IZY5 108 aa20.2■□□□□ 0.82
UPF3A-206ENST00000480362 GBP4Q96PP9 640 aa20.2■□□□□ 0.82
UPF3A-206ENST00000480362 C6orf50Q9HD87 102 aa20.2■□□□□ 0.82
UPF3A-206ENST00000480362 PCDHA4Q9UN74 947 aa20.2■□□□□ 0.82
UPF3A-206ENST00000480362 ESYT2A0FGR8 921 aa20.19■□□□□ 0.82
UPF3A-206ENST00000480362 ADAMTS3O15072 1205 aa20.19■□□□□ 0.82
UPF3A-206ENST00000480362 ZBED4O75132 1171 aa20.19■□□□□ 0.82
UPF3A-206ENST00000480362 FDX1P10109 184 aa20.19■□□□□ 0.82
UPF3A-206ENST00000480362 GNA11P29992 359 aa20.19■□□□□ 0.82
UPF3A-206ENST00000480362 HOXA7P31268 230 aaPredicted RBP20.19■□□□□ 0.82
UPF3A-206ENST00000480362 MKRN3Q13064 507 aaKnown RBP20.19■□□□□ 0.82
UPF3A-206ENST00000480362 TRAF1Q13077 416 aa20.19■□□□□ 0.82
UPF3A-206ENST00000480362 USH1GQ495M9 461 aa20.19■□□□□ 0.82
UPF3A-206ENST00000480362 SPRYD7Q5W111 196 aa20.19■□□□□ 0.82
UPF3A-206ENST00000480362 ZNF784Q8NCA9 323 aaPredicted RBP20.19■□□□□ 0.82
UPF3A-206ENST00000480362 DAGLBQ8NCG7 672 aa20.19■□□□□ 0.82
UPF3A-206ENST00000480362 ATG4CQ96DT6 458 aa20.19■□□□□ 0.82
UPF3A-206ENST00000480362 HOXC10Q9NYD6 342 aa20.19■□□□□ 0.82
UPF3A-206ENST00000480362 CTDP1Q9Y5B0 961 aaPredicted RBP20.19■□□□□ 0.82
UPF3A-206ENST00000480362 LOC285556D6RIA3 1793 aa20.18■□□□□ 0.82
UPF3A-206ENST00000480362 VWA5AO00534 786 aa20.18■□□□□ 0.82
UPF3A-206ENST00000480362 GTF2A2P52657 109 aa20.18■□□□□ 0.82
UPF3A-206ENST00000480362 DNM1Q05193 864 aaKnown RBP20.18■□□□□ 0.82
UPF3A-206ENST00000480362 SAPCD2Q86UD0 394 aa20.18■□□□□ 0.82
UPF3A-206ENST00000480362 NOSTRINQ8IVI9 506 aa20.18■□□□□ 0.82
UPF3A-206ENST00000480362 SLC38A10Q9HBR0 1119 aa20.18■□□□□ 0.82
UPF3A-206ENST00000480362 AGTPBP1Q9UPW5 1226 aa20.18■□□□□ 0.82
UPF3A-206ENST00000480362 ICAM1P05362 532 aa20.17■□□□□ 0.82
UPF3A-206ENST00000480362 ZBTB48P10074 688 aaPredicted RBP20.17■□□□□ 0.82
UPF3A-206ENST00000480362 CETPP11597 493 aa20.17■□□□□ 0.82
UPF3A-206ENST00000480362 TAL1P17542 331 aaPredicted RBP20.17■□□□□ 0.82
UPF3A-206ENST00000480362 ZNF157P51786 506 aaPredicted RBP20.17■□□□□ 0.82
UPF3A-206ENST00000480362 ADCY7P51828 1080 aa20.17■□□□□ 0.82
UPF3A-206ENST00000480362 GPAT2Q6NUI2 795 aa20.17■□□□□ 0.82
UPF3A-206ENST00000480362 CPXCR1Q8N123 301 aa20.17■□□□□ 0.82
UPF3A-206ENST00000480362 TNFRSF25Q93038 417 aa20.17■□□□□ 0.82
UPF3A-206ENST00000480362 MS4A4AQ96JQ5 239 aa20.17■□□□□ 0.82
UPF3A-206ENST00000480362 RIC8AQ9NPQ8 531 aa20.17■□□□□ 0.82
UPF3A-206ENST00000480362 TFIP11Q9UBB9 837 aaKnown RBP20.17■□□□□ 0.82
UPF3A-206ENST00000480362 ADAMTS5Q9UNA0 930 aa20.17■□□□□ 0.82
UPF3A-206ENST00000480362 PARP14Q460N5 1801 aa20.17■□□□□ 0.82
UPF3A-206ENST00000480362 MYPNQ86TC9 1320 aa20.17■□□□□ 0.82
UPF3A-206ENST00000480362 RLFQ13129 1914 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 M0R2N6 131 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 NCLP19338 710 aaKnown RBP20.16■□□□□ 0.82
UPF3A-206ENST00000480362 FSTL1Q12841 308 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 MYSM1Q5VVJ2 828 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 RGMBQ6NW40 437 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 BICD2Q8TD16 824 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 RASGRP4Q8TDF6 673 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 AGBL1Q96MI9 1066 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 ZNF396Q96N95 335 aaPredicted RBP20.16■□□□□ 0.82
UPF3A-206ENST00000480362 RAVER2Q9HCJ3 691 aaKnown RBP20.16■□□□□ 0.82
UPF3A-206ENST00000480362 CCPG1Q9ULG6 757 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 PCDHA6Q9UN73 950 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 CNPY2Q9Y2B0 182 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 PCDHA8Q9Y5H6 950 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 TLL2Q9Y6L7 1015 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 ZNF536O15090 1300 aa20.16■□□□□ 0.82
UPF3A-206ENST00000480362 CCL15-CCL14A0A0B4J2E2 113 aa20.15■□□□□ 0.82
UPF3A-206ENST00000480362 SPDYE16A6NNV3 312 aaPredicted RBP20.15■□□□□ 0.82
UPF3A-206ENST00000480362 MRPL12P52815 198 aaKnown RBP20.15■□□□□ 0.82
UPF3A-206ENST00000480362 IRX3P78415 501 aaPredicted RBP20.15■□□□□ 0.82
UPF3A-206ENST00000480362 PABPC4Q13310 644 aaKnown RBP eCLIP20.15■□□□□ 0.82
UPF3A-206ENST00000480362 CCL15Q16663 113 aa20.15■□□□□ 0.82
UPF3A-206ENST00000480362 NOM1Q5C9Z4 860 aaKnown RBP20.15■□□□□ 0.82
UPF3A-206ENST00000480362 EARS2Q5JPH6 523 aaKnown RBP20.15■□□□□ 0.82
UPF3A-206ENST00000480362 RASAL3Q86YV0 1011 aa20.15■□□□□ 0.82
UPF3A-206ENST00000480362 CUL5Q93034 780 aa20.15■□□□□ 0.82
UPF3A-206ENST00000480362 P2RX7Q99572 595 aaKnown RBP20.15■□□□□ 0.82
UPF3A-206ENST00000480362 PSTPIP2Q9H939 334 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 186.8 ms