RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 U2AF1Q01081 240 aaKnown RBP eCLIP7.97□□□□□ -1.13
PBRM1-220ENST00000480064 C19orf57Q0VDD7 668 aa7.97□□□□□ -1.13
PBRM1-220ENST00000480064 DHX8Q14562 1220 aaKnown RBP7.97□□□□□ -1.13
PBRM1-220ENST00000480064 UBE2R2Q712K3 238 aaPredicted RBP7.97□□□□□ -1.13
PBRM1-220ENST00000480064 CLEC10AQ8IUN9 316 aa7.97□□□□□ -1.13
PBRM1-220ENST00000480064 FAM20CQ8IXL6 584 aa7.97□□□□□ -1.13
PBRM1-220ENST00000480064 PI4K2BQ8TCG2 481 aa7.97□□□□□ -1.13
PBRM1-220ENST00000480064 IL17RAQ96F46 866 aa7.97□□□□□ -1.13
PBRM1-220ENST00000480064 CAMKK2Q96RR4 588 aa7.97□□□□□ -1.13
PBRM1-220ENST00000480064 CCDC86Q9H6F5 360 aaKnown RBP7.97□□□□□ -1.13
PBRM1-220ENST00000480064 IFT22Q9H7X7 185 aa7.97□□□□□ -1.13
PBRM1-220ENST00000480064 KIAA1324LA8MWY0 1029 aaPredicted RBP7.96□□□□□ -1.14
PBRM1-220ENST00000480064 CLEC3AO75596 197 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 PPM1BO75688 479 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 JMJD7P0C870 316 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 BMP3P12645 472 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 POU3F2P20265 443 aaPredicted RBP7.96□□□□□ -1.14
PBRM1-220ENST00000480064 PREPP48147 710 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 PCBP1Q15365 356 aaKnown RBP eCLIP7.96□□□□□ -1.14
PBRM1-220ENST00000480064 CFAP100Q494V2 611 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.96□□□□□ -1.14
PBRM1-220ENST00000480064 LHFPL2Q6ZUX7 228 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 CYFIP1Q7L576 1253 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 PPFIBP1Q86W92 1011 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 CCDC144CPQ8IYA2 1237 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 MAGEB6Q8N7X4 407 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 CNTD1Q8N815 330 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 PNISRQ8TF01 805 aaKnown RBP7.96□□□□□ -1.14
PBRM1-220ENST00000480064 ACSF2Q96CM8 615 aaPredicted RBP7.96□□□□□ -1.14
PBRM1-220ENST00000480064 FAM83CQ9BQN1 747 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 DBNDD2Q9BQY9 259 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 CCDC8Q9H0W5 538 aaPredicted RBP7.96□□□□□ -1.14
PBRM1-220ENST00000480064 TRIM39Q9HCM9 518 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 CSADQ9Y600 493 aa7.96□□□□□ -1.14
PBRM1-220ENST00000480064 B4E1Z4 1266 aa7.95□□□□□ -1.14
PBRM1-220ENST00000480064 IFRD1O00458 451 aaPredicted RBP7.95□□□□□ -1.14
PBRM1-220ENST00000480064 IFIT2P09913 472 aaKnown RBP7.95□□□□□ -1.14
PBRM1-220ENST00000480064 NBPF7P0C2Y1 421 aaPredicted RBP7.95□□□□□ -1.14
PBRM1-220ENST00000480064 PYGMP11217 842 aa7.95□□□□□ -1.14
PBRM1-220ENST00000480064 MAOBP27338 520 aa7.95□□□□□ -1.14
PBRM1-220ENST00000480064 SYDE2Q5VT97 1194 aa7.95□□□□□ -1.14
PBRM1-220ENST00000480064 MCTP1Q6DN14 999 aa7.95□□□□□ -1.14
PBRM1-220ENST00000480064 FDX2Q6P4F2 183 aa7.95□□□□□ -1.14
PBRM1-220ENST00000480064 POMZP3Q6PJE2 187 aa7.95□□□□□ -1.14
PBRM1-220ENST00000480064 FGD4Q96M96 766 aa7.95□□□□□ -1.14
PBRM1-220ENST00000480064 RTFDC1Q9BY42 306 aaPredicted RBP7.95□□□□□ -1.14
PBRM1-220ENST00000480064 MKRN2Q9H000 416 aaKnown RBP7.95□□□□□ -1.14
PBRM1-220ENST00000480064 KCNF1Q9H3M0 494 aa7.95□□□□□ -1.14
PBRM1-220ENST00000480064 SLC52A2Q9HAB3 445 aa7.95□□□□□ -1.14
PBRM1-220ENST00000480064 FBRSQ9HAH7 460 aa7.95□□□□□ -1.14
PBRM1-220ENST00000480064 BCCIPQ9P287 314 aaKnown RBP eCLIP7.95□□□□□ -1.14
PBRM1-220ENST00000480064 RGS13O14921 159 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 ZEB2O60315 1214 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 LIG1P18858 919 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 GRIK1P39086 918 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 SCNN1BP51168 640 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 ZNF460Q14592 562 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 INTS5Q6P9B9 1019 aaKnown RBP7.94□□□□□ -1.14
PBRM1-220ENST00000480064 BEND4Q6ZU67 534 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 C11orf96Q7Z7L8 435 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 C12orf40Q86WS4 652 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 DGKHQ86XP1 1220 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 SLFN12Q8IYM2 578 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 BVESQ8NE79 360 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 SLC7A14Q8TBB6 771 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 UBE2Q2Q8WVN8 375 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 NAP1L4Q99733 375 aaKnown RBP7.94□□□□□ -1.14
PBRM1-220ENST00000480064 WNT10AQ9GZT5 417 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 APEX2Q9UBZ4 518 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 HIF3AQ9Y2N7 669 aa7.94□□□□□ -1.14
PBRM1-220ENST00000480064 CCDC189A1A4V9 331 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 MEGF11A6BM72 1044 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 PRR19A6NJB7 356 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 RFPL1O75677 317 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 WDHD1O75717 1129 aaPredicted RBP7.93□□□□□ -1.14
PBRM1-220ENST00000480064 FBXO21O94952 628 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 SLFN14P0C7P3 912 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 ZSCAN20P17040 1043 aaPredicted RBP7.93□□□□□ -1.14
PBRM1-220ENST00000480064 SEPT7Q16181 437 aaKnown RBP7.93□□□□□ -1.14
PBRM1-220ENST00000480064 SPTY2D1Q68D10 685 aaPredicted RBP7.93□□□□□ -1.14
PBRM1-220ENST00000480064 IQSEC1Q6DN90 963 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 CXorf57Q6NSI4 855 aaKnown RBP7.93□□□□□ -1.14
PBRM1-220ENST00000480064 TMEM192Q8IY95 271 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 COG1Q8WTW3 980 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 JPH3Q8WXH2 748 aaPredicted RBP7.93□□□□□ -1.14
PBRM1-220ENST00000480064 OSBP2Q969R2 916 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 EVI5LQ96CN4 794 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 TMEM87BQ96K49 555 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 CCDC74BQ96LY2 380 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 MAGEB10Q96LZ2 347 aaPredicted RBP7.93□□□□□ -1.14
PBRM1-220ENST00000480064 ARPC5LQ9BPX5 153 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 KRTAP4-12Q9BQ66 201 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 USP26Q9BXU7 913 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 KLHL25Q9H0H3 589 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.93□□□□□ -1.14
PBRM1-220ENST00000480064 PRDM11Q9NQV5 511 aa7.93□□□□□ -1.14
PBRM1-220ENST00000480064 COL17A1Q9UMD9 1497 aaPredicted RBP7.93□□□□□ -1.14
PBRM1-220ENST00000480064 ZNF862O60290 1169 aa7.92□□□□□ -1.14
PBRM1-220ENST00000480064 ECEL1O95672 775 aa7.92□□□□□ -1.14
PBRM1-220ENST00000480064 CCND1P24385 295 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms