RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 HVCN1Q96D96 273 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 THAP9Q9H5L6 903 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 RIPOR2Q9Y4F9 1068 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 HIBADHP31937 336 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 CCT5P48643 541 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 KIF23Q02241 960 aaPredicted RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 DYNC1I2Q13409 638 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 DBN1Q16643 649 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 GPATCH4Q5T3I0 446 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 APOA5Q6Q788 366 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 RHOT2Q8IXI1 618 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 RWDD2AQ9UIY3 292 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 MORC4Q8TE76 937 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 CDKL2Q92772 493 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 STAMBPL1Q96FJ0 436 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 SENP1Q9P0U3 644 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 HEXIM1O94992 359 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 P4HA1P13674 534 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 KPNA2P52292 529 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 STRN3Q13033 797 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 DCAF17Q5H9S7 520 aaPredicted RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 FOXP3Q9BZS1 431 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 NCOA5Q9HCD5 579 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 NIP7Q9Y221 180 aaKnown RBP eCLIP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 ABCC1P33527 1531 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 PSMC4P43686 418 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 CC2D1AQ6P1N0 951 aaPredicted RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 CCDC125Q86Z20 511 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 TEX11Q8IYF3 940 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 C17orf53Q8N3J3 647 aaPredicted RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 C3orf20Q8ND61 904 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 LRRC8CQ8TDW0 803 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 NLRP7Q8WX94 980 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 FAM207AQ9NSI2 230 aaPredicted RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 PALD1Q9ULE6 856 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 PVALEFA0A1B0GWK0 134 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 A0A1W2PQC6 194 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 PTPREP23469 700 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 FBXO38Q6PIJ6 1188 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 SLC35F6Q8N357 371 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 CHURC1Q8WUH1 139 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 PPANQ9NQ55 473 aaKnown RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 CTNND1O60716 968 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 NR1D1P20393 614 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 SERPINB4P48594 390 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 KIF11P52732 1056 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 NECTIN1Q15223 517 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 MIER3Q7Z3K6 550 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 RASEFQ8IZ41 740 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 P2RX5Q93086 422 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 SAAL1Q96ER3 474 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 PPP1R9AQ9ULJ8 1098 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 STK36Q9NRP7 1315 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 MYO1FO00160 1098 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 NDUFA10O95299 355 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 PDE6AP16499 860 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 GUCY2CP25092 1073 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 CALCRLQ16602 461 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 PROM2Q8N271 834 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 KCTD17Q8N5Z5 321 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 NFATC2IPQ8NCF5 419 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 PIP4K2CQ8TBX8 421 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 HNRNPLLQ8WVV9 542 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 SUCLG2Q96I99 432 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 SRPRBQ9Y5M8 271 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 CLASP1Q7Z460 1538 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 KCNK3O14649 394 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 ADKP55263 362 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 TMC4Q7Z404 712 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 DGKHQ86XP1 1220 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 CCT6BQ92526 530 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 ARHGEF10LQ9HCE6 1279 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 AATFQ9NY61 560 aaKnown RBP eCLIP6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 PTCH1Q13635 1447 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 ATP10AO60312 1499 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 BTBD18B2RXH4 712 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 GFPT2O94808 682 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 HNRNPH2P55795 449 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 DTNBP1Q96EV8 351 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 CCDC97Q96F63 343 aaPredicted RBP6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 NEURL1BA8MQ27 555 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 CYP2E1P05181 493 aaPredicted RBP6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 TXKP42681 527 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 GUCY2DQ02846 1103 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 TYW1BQ6NUM6 668 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 ELOA2Q8IYF1 753 aaPredicted RBP6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 CCDC89Q8N998 374 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 CFAP61Q8NHU2 1237 aa6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 EIF2AQ9BY44 585 aaKnown RBP6.73□□□□□ -1.33
PRPF4B-205ENST00000480058 PLXNC1O60486 1568 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 PFDN6O15212 129 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 RPN1P04843 607 aaKnown RBP6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 CASP14P31944 242 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 RESTQ13127 1097 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 NNTQ13423 1086 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 NBPF20Q3BBV1 942 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 CCDC93Q567U6 631 aa6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 ZNF658Q5TYW1 1059 aaPredicted RBP6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 HIBCHQ6NVY1 386 aaPredicted RBP6.72□□□□□ -1.33
PRPF4B-205ENST00000480058 PLCD3Q8N3E9 789 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms