RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
CD46-214ENST00000480003 GPATCH4Q5T3I0 446 aaKnown RBP11.18□□□□□ -0.62
CD46-214ENST00000480003 KCTD1Q719H9 257 aa11.18□□□□□ -0.62
CD46-214ENST00000480003 FAM43AQ8N2R8 423 aa11.18□□□□□ -0.62
CD46-214ENST00000480003 CHURC1Q8WUH1 139 aa11.18□□□□□ -0.62
CD46-214ENST00000480003 NUP133Q8WUM0 1156 aa11.18□□□□□ -0.62
CD46-214ENST00000480003 ZSCAN31Q96LW9 406 aaPredicted RBP11.18□□□□□ -0.62
CD46-214ENST00000480003 P2RX7Q99572 595 aaKnown RBP11.18□□□□□ -0.62
CD46-214ENST00000480003 RPAP3Q9H6T3 665 aaPredicted RBP11.18□□□□□ -0.62
CD46-214ENST00000480003 RIOX1Q9H6W3 641 aa11.18□□□□□ -0.62
CD46-214ENST00000480003 ZCCHC17Q9NP64 241 aaKnown RBP11.18□□□□□ -0.62
CD46-214ENST00000480003 HOXC10Q9NYD6 342 aa11.18□□□□□ -0.62
CD46-214ENST00000480003 FEM1BQ9UK73 627 aa11.18□□□□□ -0.62
CD46-214ENST00000480003 MTMR7Q9Y216 660 aa11.18□□□□□ -0.62
CD46-214ENST00000480003 NID2Q14112 1375 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 KLRF2D3W0D1 207 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 GOLGA8HP0CJ92 632 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 RXRAP19793 462 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 GNAQP50148 359 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 FUT2Q10981 343 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 ASPRV1Q53RT3 343 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 LBX2Q6XYB7 198 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 PAXIP1Q6ZW49 1069 aaPredicted RBP11.17□□□□□ -0.62
CD46-214ENST00000480003 NBPF11Q86T75 865 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 FAM160B2Q86V87 743 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 RAB11FIP4Q86YS3 637 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 SRBD1Q8N5C6 995 aaKnown RBP11.17□□□□□ -0.62
CD46-214ENST00000480003 ZNF454Q8N9F8 522 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 PRPF38AQ8NAV1 312 aaKnown RBP11.17□□□□□ -0.62
CD46-214ENST00000480003 CHMP4CQ96CF2 233 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 MTMR8Q96EF0 704 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 UBA5Q9GZZ9 404 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 GPCPD1Q9NPB8 672 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 FBXO28Q9NVF7 368 aa11.17□□□□□ -0.62
CD46-214ENST00000480003 GOLGA8AA7E2F4 631 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 GOLGA8BA8MQT2 603 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 PDHXO00330 501 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 CYTH3O43739 400 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 RAD21O60216 631 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 EVI5O60447 810 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 KIF5BP33176 963 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 CTCFP49711 727 aaPredicted RBP11.16□□□□□ -0.62
CD46-214ENST00000480003 METAP2P50579 478 aaKnown RBP eCLIP11.16□□□□□ -0.62
CD46-214ENST00000480003 CCT2P78371 535 aaKnown RBP11.16□□□□□ -0.62
CD46-214ENST00000480003 ST3GAL1Q11201 340 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 SCRN1Q12765 414 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 SREBF2Q12772 1141 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 PABPC4Q13310 644 aaKnown RBP eCLIP11.16□□□□□ -0.62
CD46-214ENST00000480003 RTN1Q16799 776 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 MICU3Q86XE3 530 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 SPRYD3Q8NCJ5 442 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 CTCFLQ8NI51 663 aaPredicted RBP11.16□□□□□ -0.62
CD46-214ENST00000480003 TMX3Q96JJ7 454 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 LZTS2Q9BRK4 669 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 ASCC2Q9H1I8 757 aaPredicted RBP11.16□□□□□ -0.62
CD46-214ENST00000480003 SLKQ9H2G2 1235 aaPredicted RBP11.16□□□□□ -0.62
CD46-214ENST00000480003 SH2B1Q9NRF2 756 aaPredicted RBP11.16□□□□□ -0.62
CD46-214ENST00000480003 RBM28Q9NW13 759 aaKnown RBP11.16□□□□□ -0.62
CD46-214ENST00000480003 PPP1R9AQ9ULJ8 1098 aa11.16□□□□□ -0.62
CD46-214ENST00000480003 MYH4Q9Y623 1939 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 FRMPD2Q68DX3 1309 aaPredicted RBP11.15□□□□□ -0.62
CD46-214ENST00000480003 MYPNQ86TC9 1320 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 CCDC196A0A1B0GTZ2 297 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 SPDYE16A6NNV3 312 aaPredicted RBP11.15□□□□□ -0.62
CD46-214ENST00000480003 FOXN1O15353 648 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 CTDNEP1O95476 244 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 FDX1P10109 184 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 OSBPP22059 807 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 SLC16A2P36021 539 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 STK3Q13188 491 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 GRM1Q13255 1194 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 CCDC96Q2M329 555 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 SYDE2Q5VT97 1194 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 OTUD7BQ6GQQ9 843 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 ADGRD1Q6QNK2 874 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 TMTC3Q6ZXV5 915 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 NOL8Q76FK4 1167 aaKnown RBP11.15□□□□□ -0.62
CD46-214ENST00000480003 CCDC144CPQ8IYA2 1237 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 ADGRF4Q8IZF3 695 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 NECAB1Q8N987 351 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 REPS2Q8NFH8 660 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 SLF1Q9BQI6 1058 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 SPZ1Q9BXG8 430 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 CPVLQ9H3G5 476 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 JMJD4Q9H9V9 463 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 NCOA5Q9HCD5 579 aaKnown RBP11.15□□□□□ -0.62
CD46-214ENST00000480003 TSHZ2Q9NRE2 1034 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 RBPJLQ9UBG7 517 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 PRR12Q9ULL5 1215 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 PTPRFP10586 1907 aa11.15□□□□□ -0.62
CD46-214ENST00000480003 PCNTO95613 3336 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 VWA5AO00534 786 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 CA12O43570 354 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 FLOT1O75955 427 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 PLEKHA8P1O95397 391 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 IFNAR1P17181 557 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 STAT2P52630 851 aa11.14□□□□□ -0.63
CD46-214ENST00000480003 FOSBP53539 338 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms