RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 TTYH1Q9H313 450 aaPredicted RBP12.99□□□□□ -0.33
CCDC58-205ENST00000479899 MROH8Q9H579 483 aa12.99□□□□□ -0.33
CCDC58-205ENST00000479899 ARMT1Q9H993 441 aa12.99□□□□□ -0.33
CCDC58-205ENST00000479899 XPNPEP3Q9NQH7 507 aa12.99□□□□□ -0.33
CCDC58-205ENST00000479899 PGK1P00558 417 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 IGHA2P01877 340 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 PGK2P07205 417 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 RARBP10826 455 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 RLBP1P12271 317 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 FCER1AP12319 257 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 TLE2Q04725 743 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 SNX17Q15036 470 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 TTF1Q15361 905 aaPredicted RBP12.98□□□□□ -0.33
CCDC58-205ENST00000479899 ERC1Q8IUD2 1116 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 MB21D1Q8N884 522 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 MMP19Q99542 508 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 DCP1AQ9NPI6 582 aaPredicted RBP12.98□□□□□ -0.33
CCDC58-205ENST00000479899 HCSTQ9UBK5 93 aa12.98□□□□□ -0.33
CCDC58-205ENST00000479899 ZNFX1Q9P2E3 1918 aaKnown RBP12.98□□□□□ -0.33
CCDC58-205ENST00000479899 CYP2D7A0A087X1C5 515 aa12.97□□□□□ -0.33
CCDC58-205ENST00000479899 PRKAB2O43741 272 aa12.97□□□□□ -0.33
CCDC58-205ENST00000479899 CLTBP09497 229 aa12.97□□□□□ -0.33
CCDC58-205ENST00000479899 ITGB8P26012 769 aa12.97□□□□□ -0.33
CCDC58-205ENST00000479899 SMAD3P84022 425 aaKnown RBP12.97□□□□□ -0.33
CCDC58-205ENST00000479899 TMEM132BQ14DG7 1078 aa12.97□□□□□ -0.33
CCDC58-205ENST00000479899 SLFNL1Q499Z3 407 aa12.97□□□□□ -0.33
CCDC58-205ENST00000479899 SH2D4AQ9H788 454 aa12.97□□□□□ -0.33
CCDC58-205ENST00000479899 VCPKMTQ9H867 229 aa12.97□□□□□ -0.33
CCDC58-205ENST00000479899 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
CCDC58-205ENST00000479899 SWAP70Q9UH65 585 aa12.97□□□□□ -0.33
CCDC58-205ENST00000479899 A0A1W2PQ45 241 aaPredicted RBP12.96□□□□□ -0.33
CCDC58-205ENST00000479899 A0A1W2PQY0 241 aa12.96□□□□□ -0.33
CCDC58-205ENST00000479899 SMIM22K7EJ46 135 aa12.96□□□□□ -0.33
CCDC58-205ENST00000479899 WDR46O15213 610 aaKnown RBP12.96□□□□□ -0.33
CCDC58-205ENST00000479899 MBD4O95243 580 aa12.96□□□□□ -0.33
CCDC58-205ENST00000479899 RAG1P15918 1043 aa12.96□□□□□ -0.33
CCDC58-205ENST00000479899 TAL1P17542 331 aaPredicted RBP12.96□□□□□ -0.33
CCDC58-205ENST00000479899 EPHB4P54760 987 aa12.96□□□□□ -0.33
CCDC58-205ENST00000479899 TMED8Q6PL24 325 aaPredicted RBP12.96□□□□□ -0.33
CCDC58-205ENST00000479899 RNF180Q86T96 592 aa12.96□□□□□ -0.33
CCDC58-205ENST00000479899 ABRAQ8N0Z2 381 aa12.96□□□□□ -0.33
CCDC58-205ENST00000479899 FBXO28Q9NVF7 368 aa12.96□□□□□ -0.33
CCDC58-205ENST00000479899 TSR3Q9UJK0 312 aaKnown RBP12.96□□□□□ -0.33
CCDC58-205ENST00000479899 PHF24Q9UPV7 400 aa12.96□□□□□ -0.33
CCDC58-205ENST00000479899 TMX2Q9Y320 296 aa12.96□□□□□ -0.33
CCDC58-205ENST00000479899 TCRBV5S4A2TA0A5A2 114 aa12.95□□□□□ -0.34
CCDC58-205ENST00000479899 CCER2I3L3R5 266 aa12.95□□□□□ -0.34
CCDC58-205ENST00000479899 PTPN5P54829 565 aa12.95□□□□□ -0.34
CCDC58-205ENST00000479899 KCTD2Q14681 263 aa12.95□□□□□ -0.34
CCDC58-205ENST00000479899 AMOTL1Q8IY63 956 aa12.95□□□□□ -0.34
CCDC58-205ENST00000479899 RHPN1Q8TCX5 695 aa12.95□□□□□ -0.34
CCDC58-205ENST00000479899 TINF2Q9BSI4 451 aa12.95□□□□□ -0.34
CCDC58-205ENST00000479899 TMEM39AQ9NV64 488 aa12.95□□□□□ -0.34
CCDC58-205ENST00000479899 TACC3Q9Y6A5 838 aa12.95□□□□□ -0.34
CCDC58-205ENST00000479899 MYH7P12883 1935 aa12.94□□□□□ -0.34
CCDC58-205ENST00000479899 SLC25A27O95847 323 aa12.94□□□□□ -0.34
CCDC58-205ENST00000479899 IFIT2P09913 472 aaKnown RBP12.94□□□□□ -0.34
CCDC58-205ENST00000479899 EEF2P13639 858 aaKnown RBP12.94□□□□□ -0.34
CCDC58-205ENST00000479899 AKR1A1P14550 325 aa12.94□□□□□ -0.34
CCDC58-205ENST00000479899 FPGSQ05932 587 aa12.94□□□□□ -0.34
CCDC58-205ENST00000479899 FAM83BQ5T0W9 1011 aa12.94□□□□□ -0.34
CCDC58-205ENST00000479899 SIAH1Q8IUQ4 282 aa12.94□□□□□ -0.34
CCDC58-205ENST00000479899 STK11IPQ8N1F8 1099 aa12.94□□□□□ -0.34
CCDC58-205ENST00000479899 CLASRPQ8N2M8 674 aaKnown RBP12.94□□□□□ -0.34
CCDC58-205ENST00000479899 PANK1Q8TE04 598 aa12.94□□□□□ -0.34
CCDC58-205ENST00000479899 NLRP7Q8WX94 980 aa12.94□□□□□ -0.34
CCDC58-205ENST00000479899 ZHX1Q9UKY1 873 aaPredicted RBP12.94□□□□□ -0.34
CCDC58-205ENST00000479899 SMCHD1A6NHR9 2005 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 TRIM66O15016 1216 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 CHGBP05060 677 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 CDK8P49336 464 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 ZNF792Q3KQV3 632 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 HSP90AB4PQ58FF6 505 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 C1orf53Q5VUE5 145 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 RIOX2Q8IUF8 465 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 BOLA2Q9H3K6 86 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 GOPCQ9HD26 462 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 STARD7Q9NQZ5 370 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 PAG1Q9NWQ8 432 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 CNPY2Q9Y2B0 182 aa12.93□□□□□ -0.34
CCDC58-205ENST00000479899 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 USP17L12C9JPN9 530 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 USP17L21D6R901 530 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 KIAA0355O15063 1070 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 RNF40O75150 1001 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 ZNF865P0CJ78 1059 aaPredicted RBP12.92□□□□□ -0.34
CCDC58-205ENST00000479899 ADD2P35612 726 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 STAT3P40763 770 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 HNRNPUQ00839 825 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC58-205ENST00000479899 GRIN2CQ14957 1233 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 USP38Q8NB14 1042 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 PPM1EQ8WY54 764 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 KIF1BPQ96EK5 621 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 DDRGK1Q96HY6 314 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 CCDC17Q96LX7 622 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 NUP88Q99567 741 aaPredicted RBP12.92□□□□□ -0.34
CCDC58-205ENST00000479899 NRBP1Q9UHY1 535 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 PPP1R9AQ9ULJ8 1098 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 SLC4A4Q9Y6R1 1079 aa12.92□□□□□ -0.34
CCDC58-205ENST00000479899 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms