RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 CNTNAP5Q8WYK1 1306 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 TRIM49BA6NDI0 452 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 ZNF185O15231 689 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 HIBADHP31937 336 aaKnown RBP14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 AARSP49588 968 aaKnown RBP eCLIP14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 HERVK_113P62684 666 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 RCSD1Q6JBY9 416 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 AFAP1L1Q8TED9 768 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 MTA3Q9BTC8 594 aa14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 MKRN1Q9UHC7 482 aaKnown RBP14.95□□□□□ -0.02
PDZRN3-208ENST00000479530 PHLPP1O60346 1717 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 MCM7P33993 719 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 GGCXP38435 758 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 TUBB4BP68371 445 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 UBXN1Q04323 297 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 E2F4Q16254 413 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 TTC31Q49AM3 519 aaPredicted RBP14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 CT47A1Q5JQC4 288 aaPredicted RBP14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 STAG2Q8N3U4 1231 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 NELFBQ8WX92 580 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 GPKOWQ92917 476 aaPredicted RBP eCLIP14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 AGPSO00116 658 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 RCAN1P53805 252 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 TTC38Q5R3I4 469 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 WDR59Q6PJI9 974 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 IRF2BP1Q8IU81 584 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 EEF2KMTQ96G04 330 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 EHD4Q9H223 541 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 RABEP2Q9H5N1 569 aa14.94□□□□□ -0.02
PDZRN3-208ENST00000479530 MYH6P13533 1939 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 RCCD1A6NED2 376 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 PDE2AO00408 941 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 PSMD14O00487 310 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 SLC35G1Q2M3R5 365 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 NBPF5PQ86XG9 351 aaPredicted RBP14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 IL17RBQ9NRM6 502 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 DUSP10Q9Y6W6 482 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 PPFIA4O75335 1185 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 TM4SF1P30408 202 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 PMS1P54277 932 aaKnown RBP14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 PAK1Q13153 545 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 TYW1BQ6NUM6 668 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 SLC44A5Q8NCS7 719 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 COG1Q8WTW3 980 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 LACRTQ9GZZ8 138 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 MCM9Q9NXL9 1143 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 RWDD2AQ9UIY3 292 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 SAR1BQ9Y6B6 198 aa14.93□□□□□ -0.02
PDZRN3-208ENST00000479530 NLRP5P59047 1200 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 DIXDC1Q155Q3 683 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 SLC10A5Q5PT55 438 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 CCDC122Q5T0U0 273 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 ICE2Q659A1 982 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 PDXDC2PQ6P474 469 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 GOLGA6L1Q8N7Z2 621 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 SMARCC1Q92922 1105 aaPredicted RBP14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 CPVLQ9H3G5 476 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 VIPAS39Q9H9C1 493 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 FAM205AQ6ZU69 1335 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 USP17L3A6NCW0 530 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 USP17L4A6NCW7 530 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 TSPY2A6NKD2 308 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 PES1O00541 588 aaKnown RBP14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 XBP1P17861 261 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 PRCPP42785 496 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 MRPS25P82663 173 aaKnown RBP14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 USP17L1Q7RTZ2 530 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 SETDB2Q96T68 719 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 ACBD3Q9H3P7 528 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 DUOX1Q9NRD9 1551 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 JRKLQ9Y4A0 524 aa14.92□□□□□ -0.02
PDZRN3-208ENST00000479530 GNPATO15228 680 aa14.91□□□□□ -0.02
PDZRN3-208ENST00000479530 STIM1Q13586 685 aa14.91□□□□□ -0.02
PDZRN3-208ENST00000479530 FERMT2Q96AC1 680 aa14.91□□□□□ -0.02
PDZRN3-208ENST00000479530 PLCH1Q4KWH8 1693 aa14.91□□□□□ -0.02
PDZRN3-208ENST00000479530 TUBBP07437 444 aa14.91□□□□□ -0.02
PDZRN3-208ENST00000479530 SCG2P13521 617 aa14.91□□□□□ -0.02
PDZRN3-208ENST00000479530 TFAP4Q01664 338 aa14.91□□□□□ -0.02
PDZRN3-208ENST00000479530 CTCFLQ8NI51 663 aaPredicted RBP14.91□□□□□ -0.02
PDZRN3-208ENST00000479530 SELENOOQ9BVL4 669 aa14.91□□□□□ -0.02
PDZRN3-208ENST00000479530 PP2D1A8MPX8 630 aa14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 KLK7P49862 253 aa14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 GTF2A1P52655 376 aaPredicted RBP14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 NFIXQ14938 502 aa14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 OR8K1Q8NGG5 319 aa14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 JAKMIP2Q96AA8 810 aa14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 CRNKL1Q9BZJ0 848 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 KAT14Q9H8E8 782 aa14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 AGPAT5Q9NUQ2 364 aa14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 RBM28Q9NW13 759 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 ORC4O43929 436 aa14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 PARP1P09874 1014 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 ATP2C1P98194 919 aaPredicted RBP14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 C2orf54Q08AI8 447 aa14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 PPP2R5BQ15173 497 aa14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 EZH2Q15910 746 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 PAPD7Q5XG87 772 aaKnown RBP14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 BARGINQ6ZT62 677 aa14.9□□□□□ -0.02
PDZRN3-208ENST00000479530 SH3RF3Q8TEJ3 882 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms