RNA–Protein interactions for RNA: ENST00000479460.5

TRIM59-205, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-205ENST00000479460 NDUFB10O96000 172 aa23.19■■□□□ 1.3
TRIM59-205ENST00000479460 CD4P01730 458 aa23.19■■□□□ 1.3
TRIM59-205ENST00000479460 NKX3-2P78367 333 aa23.19■■□□□ 1.3
TRIM59-205ENST00000479460 CPXCR1Q8N123 301 aa23.19■■□□□ 1.3
TRIM59-205ENST00000479460 HAUS7Q99871 368 aa23.19■■□□□ 1.3
TRIM59-205ENST00000479460 MTIF3Q9H2K0 278 aaKnown RBP23.19■■□□□ 1.3
TRIM59-205ENST00000479460 FBXO40Q9UH90 709 aa23.19■■□□□ 1.3
TRIM59-205ENST00000479460 CTAGE5O15320 804 aa23.18■■□□□ 1.3
TRIM59-205ENST00000479460 CHGBP05060 677 aa23.18■■□□□ 1.3
TRIM59-205ENST00000479460 SLC4A3P48751 1232 aa23.18■■□□□ 1.3
TRIM59-205ENST00000479460 ARMCX2Q7L311 632 aa23.18■■□□□ 1.3
TRIM59-205ENST00000479460 ANKRD35Q8N283 1001 aa23.18■■□□□ 1.3
TRIM59-205ENST00000479460 UHRF1Q96T88 793 aaPredicted RBP23.18■■□□□ 1.3
TRIM59-205ENST00000479460 CTDP1Q9Y5B0 961 aaPredicted RBP23.18■■□□□ 1.3
TRIM59-205ENST00000479460 RASA1P20936 1047 aa23.17■■□□□ 1.3
TRIM59-205ENST00000479460 IGFBP4P22692 258 aa23.17■■□□□ 1.3
TRIM59-205ENST00000479460 CYP2C18P33260 490 aa23.17■■□□□ 1.3
TRIM59-205ENST00000479460 CCDC85BQ15834 202 aaPredicted RBP23.17■■□□□ 1.3
TRIM59-205ENST00000479460 RPAP2Q8IXW5 612 aaPredicted RBP23.17■■□□□ 1.3
TRIM59-205ENST00000479460 CHST13Q8NET6 341 aa23.17■■□□□ 1.3
TRIM59-205ENST00000479460 KATNBL1Q9H079 304 aa23.17■■□□□ 1.3
TRIM59-205ENST00000479460 SLC38A10Q9HBR0 1119 aa23.17■■□□□ 1.3
TRIM59-205ENST00000479460 CXXC1Q9P0U4 656 aaPredicted RBP23.17■■□□□ 1.3
TRIM59-205ENST00000479460 RAPGEFL1Q9UHV5 662 aa23.17■■□□□ 1.3
TRIM59-205ENST00000479460 RAB11FIP3O75154 756 aa23.16■■□□□ 1.3
TRIM59-205ENST00000479460 FGBP02675 491 aa23.16■■□□□ 1.3
TRIM59-205ENST00000479460 SBK1Q52WX2 424 aa23.16■■□□□ 1.3
TRIM59-205ENST00000479460 SLC43A3Q8NBI5 491 aa23.16■■□□□ 1.3
TRIM59-205ENST00000479460 PANK1Q8TE04 598 aa23.16■■□□□ 1.3
TRIM59-205ENST00000479460 PUS7LQ9H0K6 701 aaKnown RBP23.16■■□□□ 1.3
TRIM59-205ENST00000479460 NKX2-4Q9H2Z4 354 aa23.16■■□□□ 1.3
TRIM59-205ENST00000479460 SLC28A3Q9HAS3 691 aa23.16■■□□□ 1.3
TRIM59-205ENST00000479460 RAVER2Q9HCJ3 691 aaKnown RBP23.16■■□□□ 1.3
TRIM59-205ENST00000479460 HMMRO75330 724 aa23.15■■□□□ 1.3
TRIM59-205ENST00000479460 OAZ1P54368 228 aa23.15■■□□□ 1.3
TRIM59-205ENST00000479460 ZSCAN25Q6NSZ9 544 aa23.15■■□□□ 1.3
TRIM59-205ENST00000479460 CCDC144CPQ8IYA2 1237 aa23.15■■□□□ 1.3
TRIM59-205ENST00000479460 IL27Q8NEV9 243 aa23.15■■□□□ 1.3
TRIM59-205ENST00000479460 KIFC2Q96AC6 838 aa23.15■■□□□ 1.3
TRIM59-205ENST00000479460 BCL11AQ9H165 835 aa23.15■■□□□ 1.3
TRIM59-205ENST00000479460 HIPK3Q9H422 1215 aa23.15■■□□□ 1.3
TRIM59-205ENST00000479460 MKNK2Q9HBH9 465 aa23.14■■□□□ 1.29
TRIM59-205ENST00000479460 FEM1BQ9UK73 627 aa23.14■■□□□ 1.29
TRIM59-205ENST00000479460 YBX2Q9Y2T7 364 aaKnown RBP23.14■■□□□ 1.29
TRIM59-205ENST00000479460 REV3LO60673 3130 aa23.14■■□□□ 1.29
TRIM59-205ENST00000479460 LRRC37A2A6NM11 1700 aa23.13■■□□□ 1.29
TRIM59-205ENST00000479460 IGKV6D-41A0A0C4DH26 115 aa23.13■■□□□ 1.29
TRIM59-205ENST00000479460 CABYRO75952 493 aa23.13■■□□□ 1.29
TRIM59-205ENST00000479460 BEX3Q00994 111 aa23.13■■□□□ 1.29
TRIM59-205ENST00000479460 TNFAIP2Q03169 654 aa23.13■■□□□ 1.29
TRIM59-205ENST00000479460 SEZ6LQ9BYH1 1024 aa23.13■■□□□ 1.29
TRIM59-205ENST00000479460 CLIP2Q9UDT6 1046 aa23.13■■□□□ 1.29
TRIM59-205ENST00000479460 TCF20Q9UGU0 1960 aaKnown RBP23.12■■□□□ 1.29
TRIM59-205ENST00000479460 ASTN1O14525 1302 aa23.12■■□□□ 1.29
TRIM59-205ENST00000479460 TRANK1O15050 2925 aa23.12■■□□□ 1.29
TRIM59-205ENST00000479460 PLA2G5P39877 138 aa23.12■■□□□ 1.29
TRIM59-205ENST00000479460 GIMAP6Q6P9H5 292 aa23.12■■□□□ 1.29
TRIM59-205ENST00000479460 CXCL17Q6UXB2 119 aa23.12■■□□□ 1.29
TRIM59-205ENST00000479460 SIRT2Q8IXJ6 389 aa23.12■■□□□ 1.29
TRIM59-205ENST00000479460 MKL1Q969V6 931 aa23.12■■□□□ 1.29
TRIM59-205ENST00000479460 STRBPQ96SI9 672 aaKnown RBP23.12■■□□□ 1.29
TRIM59-205ENST00000479460 TSPYL2Q9H2G4 693 aaPredicted RBP23.12■■□□□ 1.29
TRIM59-205ENST00000479460 SYNPO2Q9UMS6 1093 aa23.12■■□□□ 1.29
TRIM59-205ENST00000479460 UMODL1Q5DID0 1318 aa23.11■■□□□ 1.29
TRIM59-205ENST00000479460 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.11■■□□□ 1.29
TRIM59-205ENST00000479460 CNTN2Q02246 1040 aa23.11■■□□□ 1.29
TRIM59-205ENST00000479460 ITGA7Q13683 1181 aa23.11■■□□□ 1.29
TRIM59-205ENST00000479460 OTOP2Q7RTS6 562 aa23.11■■□□□ 1.29
TRIM59-205ENST00000479460 FAM133AQ8N9E0 248 aa23.11■■□□□ 1.29
TRIM59-205ENST00000479460 GNEQ9Y223 722 aaKnown RBP23.11■■□□□ 1.29
TRIM59-205ENST00000479460 GSG1L2A8MUP6 293 aa23.1■■□□□ 1.29
TRIM59-205ENST00000479460 FDX1P10109 184 aa23.1■■□□□ 1.29
TRIM59-205ENST00000479460 NOL8Q76FK4 1167 aaKnown RBP23.1■■□□□ 1.29
TRIM59-205ENST00000479460 TLK2Q86UE8 772 aa23.1■■□□□ 1.29
TRIM59-205ENST00000479460 STK11IPQ8N1F8 1099 aa23.1■■□□□ 1.29
TRIM59-205ENST00000479460 GMCL1P1Q8NEA9 526 aa23.1■■□□□ 1.29
TRIM59-205ENST00000479460 NOC4LQ9BVI4 516 aaKnown RBP23.1■■□□□ 1.29
TRIM59-205ENST00000479460 ACAD9Q9H845 621 aa23.1■■□□□ 1.29
TRIM59-205ENST00000479460 XIRP2A4UGR9 3374 aa23.09■■□□□ 1.29
TRIM59-205ENST00000479460 MINDY4BA8MYZ0 360 aa23.09■■□□□ 1.29
TRIM59-205ENST00000479460 FSCN1Q16658 493 aaKnown RBP23.09■■□□□ 1.29
TRIM59-205ENST00000479460 CEP95Q96GE4 821 aa23.09■■□□□ 1.29
TRIM59-205ENST00000479460 HOMER2Q9NSB8 354 aa23.09■■□□□ 1.29
TRIM59-205ENST00000479460 MTMR4Q9NYA4 1195 aa23.09■■□□□ 1.29
TRIM59-205ENST00000479460 PCDHA11Q9Y5I1 949 aa23.09■■□□□ 1.29
TRIM59-205ENST00000479460 GRIN2DO15399 1336 aa23.08■■□□□ 1.29
TRIM59-205ENST00000479460 ASB14A6NK59 587 aa23.08■■□□□ 1.29
TRIM59-205ENST00000479460 ZEB2O60315 1214 aa23.08■■□□□ 1.29
TRIM59-205ENST00000479460 CCL23P55773 120 aa23.08■■□□□ 1.29
TRIM59-205ENST00000479460 PPP2R2DQ66LE6 453 aa23.08■■□□□ 1.29
TRIM59-205ENST00000479460 RPUSD2Q8IZ73 545 aaKnown RBP23.08■■□□□ 1.29
TRIM59-205ENST00000479460 FAM122AQ96E09 287 aa23.08■■□□□ 1.29
TRIM59-205ENST00000479460 AP5M1Q9H0R1 490 aa23.08■■□□□ 1.29
TRIM59-205ENST00000479460 WNT8AQ9H1J5 351 aa23.08■■□□□ 1.29
TRIM59-205ENST00000479460 ZNF287Q9HBT7 754 aa23.08■■□□□ 1.29
TRIM59-205ENST00000479460 SLC4A7Q9Y6M7 1214 aa23.08■■□□□ 1.29
TRIM59-205ENST00000479460 SOWAHBA6NEL2 793 aa23.07■■□□□ 1.28
TRIM59-205ENST00000479460 TTLL1O95922 423 aa23.07■■□□□ 1.28
TRIM59-205ENST00000479460 MS4A1P11836 297 aa23.07■■□□□ 1.28
TRIM59-205ENST00000479460 BMP3P12645 472 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms