RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 DDX25Q9UHL0 483 aaKnown RBP21.56■■□□□ 1.04
ABCA2-217ENST00000479446 ERVK-7P63135 1459 aa21.55■■□□□ 1.04
ABCA2-217ENST00000479446 FNBP4Q8N3X1 1017 aaPredicted RBP21.55■■□□□ 1.04
ABCA2-217ENST00000479446 CHRNDQ07001 517 aa21.55■■□□□ 1.04
ABCA2-217ENST00000479446 CASC4Q6P4E1 433 aa21.55■■□□□ 1.04
ABCA2-217ENST00000479446 FRMPD2Q68DX3 1309 aaPredicted RBP21.55■■□□□ 1.04
ABCA2-217ENST00000479446 GOLGA8HP0CJ92 632 aa21.55■■□□□ 1.04
ABCA2-217ENST00000479446 ZNF589Q86UQ0 364 aaPredicted RBP21.55■■□□□ 1.04
ABCA2-217ENST00000479446 MAP3K15Q6ZN16 1313 aa21.55■■□□□ 1.04
ABCA2-217ENST00000479446 SF3A3Q12874 501 aaKnown RBP eCLIP21.55■■□□□ 1.04
ABCA2-217ENST00000479446 PROSER3Q2NL68 480 aa21.55■■□□□ 1.04
ABCA2-217ENST00000479446 TUBGCP2Q9BSJ2 902 aa21.55■■□□□ 1.04
ABCA2-217ENST00000479446 RIC8AQ9NPQ8 531 aa21.55■■□□□ 1.04
ABCA2-217ENST00000479446 TROVE2P10155 538 aaKnown RBP eCLIP21.55■■□□□ 1.04
ABCA2-217ENST00000479446 BCAS4Q8TDM0 211 aa21.55■■□□□ 1.04
ABCA2-217ENST00000479446 GREM2Q9H772 168 aa21.55■■□□□ 1.04
ABCA2-217ENST00000479446 LAD1O00515 517 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 ATP8B1O43520 1251 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 FMNL1O95466 1100 aaPredicted RBP21.54■■□□□ 1.04
ABCA2-217ENST00000479446 PDE6BP35913 854 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 DLGAP5Q15398 846 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 CCDC38Q502W7 563 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 FAM178BQ8IXR5 827 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 ADORA1P30542 326 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 ALDH1B1P30837 517 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 C11orf57Q6ZUT1 292 aaPredicted RBP21.54■■□□□ 1.04
ABCA2-217ENST00000479446 KLHL14Q9P2G3 628 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 DEPTORQ8TB45 409 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 PUS3Q9BZE2 481 aaKnown RBP21.54■■□□□ 1.04
ABCA2-217ENST00000479446 IFNB1P01574 187 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 EEF1GP26641 437 aaKnown RBP21.54■■□□□ 1.04
ABCA2-217ENST00000479446 ATP1A2P50993 1020 aa21.54■■□□□ 1.04
ABCA2-217ENST00000479446 CNOT6LQ96LI5 555 aaKnown RBP21.54■■□□□ 1.04
ABCA2-217ENST00000479446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.54■■□□□ 1.04
ABCA2-217ENST00000479446 LARSQ9P2J5 1176 aaKnown RBP21.54■■□□□ 1.04
ABCA2-217ENST00000479446 PRPF6O94906 941 aaKnown RBP21.54■■□□□ 1.04
ABCA2-217ENST00000479446 CACTINQ8WUQ7 758 aaKnown RBP21.54■■□□□ 1.04
ABCA2-217ENST00000479446 CCDC125Q86Z20 511 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 LINC00301Q8NCQ3 95 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 ATP2A3Q93084 1043 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 DPH5Q9H2P9 285 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 LMTK3Q96Q04 1460 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 SYNMO15061 1565 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 GIPC1O14908 333 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 P4HA1P13674 534 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 RAB20Q9NX57 234 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 CAPN7Q9Y6W3 813 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 IVNS1ABPQ9Y6Y0 642 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 IGSF1Q8N6C5 1336 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 ADCY8P40145 1251 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 DDX17Q92841 729 aaKnown RBP21.53■■□□□ 1.04
ABCA2-217ENST00000479446 ADGBQ8N7X0 1667 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 PPP2R5DQ14738 602 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 FAM98CQ17RN3 349 aaKnown RBP21.53■■□□□ 1.04
ABCA2-217ENST00000479446 SLC35F6Q8N357 371 aa21.53■■□□□ 1.04
ABCA2-217ENST00000479446 KIF23Q02241 960 aaPredicted RBP21.53■■□□□ 1.04
ABCA2-217ENST00000479446 RPUSD2Q8IZ73 545 aaKnown RBP21.53■■□□□ 1.04
ABCA2-217ENST00000479446 LRRC47Q8N1G4 583 aaKnown RBP21.53■■□□□ 1.04
ABCA2-217ENST00000479446 ZNF853P0CG23 659 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 ATP2B4P23634 1241 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 PHLDB2Q86SQ0 1253 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 RSAD2Q8WXG1 361 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 PDE11AQ9HCR9 933 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 TRIM37O94972 964 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 CTAGE3PQ8IX95 158 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 STK32BQ9NY57 414 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 TRPC6Q9Y210 931 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 RNF10Q8N5U6 811 aaKnown RBP21.52■■□□□ 1.04
ABCA2-217ENST00000479446 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.52■■□□□ 1.04
ABCA2-217ENST00000479446 C1orf112Q9NSG2 853 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 MRPL11Q9Y3B7 192 aaKnown RBP21.52■■□□□ 1.04
ABCA2-217ENST00000479446 MLH3Q9UHC1 1453 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 ECM2O94769 699 aaPredicted RBP21.52■■□□□ 1.04
ABCA2-217ENST00000479446 SEPT6Q14141 434 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 FAM102BQ5T8I3 360 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 FBXO11Q86XK2 927 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 PALM2Q8IXS6 379 aa21.52■■□□□ 1.04
ABCA2-217ENST00000479446 DHTKD1Q96HY7 919 aaPredicted RBP21.52■■□□□ 1.04
ABCA2-217ENST00000479446 ANKRD13CQ8N6S4 541 aa21.52■■□□□ 1.03
ABCA2-217ENST00000479446 VCXQ9H320 206 aa21.52■■□□□ 1.03
ABCA2-217ENST00000479446 BZW2Q9Y6E2 419 aaKnown RBP21.52■■□□□ 1.03
ABCA2-217ENST00000479446 K7ENM7 598 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 POLR2MP0CAP2 368 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 RETREG2Q8NC44 543 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 PHBP35232 272 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 ARHGEF5Q12774 1597 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 PROCA1Q8NCQ7 364 aaPredicted RBP21.51■■□□□ 1.03
ABCA2-217ENST00000479446 KRT12Q99456 494 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 PFDN4Q9NQP4 134 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 SAMD9Q5K651 1589 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 BTDP43251 543 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 GNPTABQ3T906 1256 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.51■■□□□ 1.03
ABCA2-217ENST00000479446 PDE6CP51160 858 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 EXOC3L4Q17RC7 722 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 GPHNQ9NQX3 736 aaPredicted RBP21.51■■□□□ 1.03
ABCA2-217ENST00000479446 TYW1Q9NV66 732 aaKnown RBP21.51■■□□□ 1.03
ABCA2-217ENST00000479446 PHLPP2Q6ZVD8 1323 aa21.51■■□□□ 1.03
ABCA2-217ENST00000479446 ABCA5Q8WWZ7 1642 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms