RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 CDK2AP1O14519 115 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 BACH1O14867 736 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 PRKAB2O43741 272 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 LDHCP07864 332 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 VIL1P09327 827 aaKnown RBP7.91□□□□□ -1.14
USP48-208ENST00000479177 MSX1P28360 303 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 ANP32AP39687 249 aaKnown RBP7.91□□□□□ -1.14
USP48-208ENST00000479177 BTDP43251 543 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 SNRPNP63162 240 aaKnown RBP7.91□□□□□ -1.14
USP48-208ENST00000479177 RABEP1Q15276 862 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 ALX1Q15699 326 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 SH3PXD2AQ5TCZ1 1133 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 CERS3Q8IU89 383 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 JDP2Q8WYK2 163 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 GTPBP3Q969Y2 492 aaKnown RBP7.91□□□□□ -1.14
USP48-208ENST00000479177 PSMG3-AS1Q96PY0 264 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 GMLQ99445 158 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 TSPAN10Q9H1Z9 355 aaPredicted RBP7.91□□□□□ -1.14
USP48-208ENST00000479177 RUBCNLQ9H714 662 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 AATFQ9NY61 560 aaKnown RBP eCLIP7.91□□□□□ -1.14
USP48-208ENST00000479177 TTF2Q9UNY4 1162 aaKnown RBP7.91□□□□□ -1.14
USP48-208ENST00000479177 TAF6LQ9Y6J9 622 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 SLC4A4Q9Y6R1 1079 aa7.91□□□□□ -1.14
USP48-208ENST00000479177 ZNF541Q9H0D2 1346 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 PATL2C9JE40 543 aaKnown RBP7.9□□□□□ -1.14
USP48-208ENST00000479177 F8W031 263 aaPredicted RBP7.9□□□□□ -1.14
USP48-208ENST00000479177 FZD9O00144 591 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 FGAP02671 866 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 F11P03951 625 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 CYP21A2P08686 494 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 FURINP09958 794 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 LMNB1P20700 586 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 CRKP46108 304 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 RHBDL3P58872 404 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 HDLBPQ00341 1268 aaKnown RBP7.9□□□□□ -1.14
USP48-208ENST00000479177 CXCL9Q07325 125 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 CIAPIN1Q6FI81 312 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 HHIPL2Q6UWX4 724 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 ARHGAP27Q6ZUM4 889 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 KIAA0825Q8IV33 1275 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 SH3RF3Q8TEJ3 882 aaPredicted RBP7.9□□□□□ -1.14
USP48-208ENST00000479177 TEKT1Q969V4 418 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 NOL10Q9BSC4 688 aaKnown RBP7.9□□□□□ -1.14
USP48-208ENST00000479177 NIFKQ9BYG3 293 aaKnown RBP7.9□□□□□ -1.14
USP48-208ENST00000479177 CRNKL1Q9BZJ0 848 aaKnown RBP7.9□□□□□ -1.14
USP48-208ENST00000479177 CTNNA3Q9UI47 895 aa7.9□□□□□ -1.14
USP48-208ENST00000479177 MYH1P12882 1939 aa7.9□□□□□ -1.15
USP48-208ENST00000479177 FAM196BA6NMK8 535 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 BAG3O95817 575 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 APPP05067 770 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 ZKSCAN1P17029 563 aaPredicted RBP7.89□□□□□ -1.15
USP48-208ENST00000479177 ATP4AP20648 1035 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 TDO2P48775 406 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 IMMTQ16891 758 aaKnown RBP7.89□□□□□ -1.15
USP48-208ENST00000479177 ADCK5Q3MIX3 580 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 GIMAP6Q6P9H5 292 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 STOX1Q6ZVD7 989 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 ANKMY2Q8IV38 441 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 IFNL3Q8IZI9 196 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 AGBL3Q8NEM8 1001 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 SDR42E1Q8WUS8 393 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 KLRG1Q96E93 195 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 CCDC97Q96F63 343 aaPredicted RBP7.89□□□□□ -1.15
USP48-208ENST00000479177 ZDHHC15Q96MV8 337 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 MRIQ9BWK5 157 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 NACAP1Q9BZK3 213 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 NAPBQ9H115 298 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 DCP1AQ9NPI6 582 aaPredicted RBP7.89□□□□□ -1.15
USP48-208ENST00000479177 SERPINA10Q9UK55 444 aa7.89□□□□□ -1.15
USP48-208ENST00000479177 ROBO3Q96MS0 1386 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 FLT1P17948 1338 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 A0A1B0GTH6 734 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 RPS12P25398 132 aaKnown RBP7.88□□□□□ -1.15
USP48-208ENST00000479177 TXLNAP40222 546 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 SEC13P55735 322 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 HAND2P61296 217 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 KRT32Q14532 448 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 TNIP1Q15025 636 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 APOBEC3HQ6NTF7 200 aaKnown RBP7.88□□□□□ -1.15
USP48-208ENST00000479177 CDC42EP5Q6NZY7 148 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 TBC1D10CQ8IV04 446 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 TEX11Q8IYF3 940 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 JAKMIP1Q96N16 626 aaKnown RBP7.88□□□□□ -1.15
USP48-208ENST00000479177 UPF3BQ9BZI7 483 aaKnown RBP7.88□□□□□ -1.15
USP48-208ENST00000479177 TM6SF1Q9BZW5 370 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 ATP8A2Q9NTI2 1148 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 PCDHAC2Q9Y5I4 1007 aa7.88□□□□□ -1.15
USP48-208ENST00000479177 SIPA1L1O43166 1804 aa7.87□□□□□ -1.15
USP48-208ENST00000479177 WDHD1O75717 1129 aaPredicted RBP7.87□□□□□ -1.15
USP48-208ENST00000479177 CASTP20810 708 aaKnown RBP7.87□□□□□ -1.15
USP48-208ENST00000479177 COL8A1P27658 744 aa7.87□□□□□ -1.15
USP48-208ENST00000479177 USP5P45974 858 aa7.87□□□□□ -1.15
USP48-208ENST00000479177 GMPSP49915 693 aaPredicted RBP7.87□□□□□ -1.15
USP48-208ENST00000479177 EIF6P56537 245 aaKnown RBP7.87□□□□□ -1.15
USP48-208ENST00000479177 ZNF280AP59817 542 aaPredicted RBP7.87□□□□□ -1.15
USP48-208ENST00000479177 PPARAQ07869 468 aa7.87□□□□□ -1.15
USP48-208ENST00000479177 COL9A3Q14050 684 aaPredicted RBP7.87□□□□□ -1.15
USP48-208ENST00000479177 CFAP100Q494V2 611 aa7.87□□□□□ -1.15
USP48-208ENST00000479177 SBK1Q52WX2 424 aa7.87□□□□□ -1.15
USP48-208ENST00000479177 CTR9Q6PD62 1173 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms