RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 TSPY2A6NKD2 308 aa15.73■□□□□ 0.11
VCL-205ENST00000478896 KIAA0355O15063 1070 aa15.73■□□□□ 0.11
VCL-205ENST00000478896 FDX1P10109 184 aa15.73■□□□□ 0.11
VCL-205ENST00000478896 MX1P20591 662 aa15.73■□□□□ 0.11
VCL-205ENST00000478896 SMAD3P84022 425 aaKnown RBP15.73■□□□□ 0.11
VCL-205ENST00000478896 PPP4R3BQ5MIZ7 849 aa15.73■□□□□ 0.11
VCL-205ENST00000478896 FAM160B2Q86V87 743 aa15.73■□□□□ 0.11
VCL-205ENST00000478896 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.73■□□□□ 0.11
VCL-205ENST00000478896 PCSK9Q8NBP7 692 aaKnown RBP15.73■□□□□ 0.11
VCL-205ENST00000478896 ABHD16BQ9H3Z7 469 aa15.73■□□□□ 0.11
VCL-205ENST00000478896 ACAD9Q9H845 621 aa15.73■□□□□ 0.11
VCL-205ENST00000478896 STX8Q9UNK0 236 aa15.73■□□□□ 0.11
VCL-205ENST00000478896 DNAH12Q6ZR08 3092 aa15.73■□□□□ 0.11
VCL-205ENST00000478896 CST5P28325 142 aaPredicted RBP15.72■□□□□ 0.11
VCL-205ENST00000478896 FAAP100Q0VG06 881 aa15.72■□□□□ 0.11
VCL-205ENST00000478896 CCDC144BQ3MJ40 725 aa15.72■□□□□ 0.11
VCL-205ENST00000478896 ZMYM1Q5SVZ6 1142 aa15.72■□□□□ 0.11
VCL-205ENST00000478896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.72■□□□□ 0.11
VCL-205ENST00000478896 ANKRD33Q7Z3H0 272 aa15.72■□□□□ 0.11
VCL-205ENST00000478896 CCDC144CPQ8IYA2 1237 aa15.72■□□□□ 0.11
VCL-205ENST00000478896 KLHDC9Q8NEP7 349 aa15.72■□□□□ 0.11
VCL-205ENST00000478896 OTUD7AQ8TE49 926 aaPredicted RBP15.72■□□□□ 0.11
VCL-205ENST00000478896 CHURC1Q8WUH1 139 aa15.72■□□□□ 0.11
VCL-205ENST00000478896 TOX2Q96NM4 488 aa15.72■□□□□ 0.11
VCL-205ENST00000478896 CDX2Q99626 313 aaPredicted RBP15.72■□□□□ 0.11
VCL-205ENST00000478896 ASGR1P07306 291 aa15.71■□□□□ 0.11
VCL-205ENST00000478896 CCDC129Q6ZRS4 1044 aa15.71■□□□□ 0.11
VCL-205ENST00000478896 NOL8Q76FK4 1167 aaKnown RBP15.71■□□□□ 0.11
VCL-205ENST00000478896 FGD4Q96M96 766 aa15.71■□□□□ 0.11
VCL-205ENST00000478896 SEMA6BQ9H3T3 888 aa15.71■□□□□ 0.11
VCL-205ENST00000478896 RNF146Q9NTX7 359 aa15.71■□□□□ 0.11
VCL-205ENST00000478896 MTMR7Q9Y216 660 aa15.71■□□□□ 0.11
VCL-205ENST00000478896 PCDHB15Q9Y5E8 787 aa15.71■□□□□ 0.11
VCL-205ENST00000478896 ELP1O95163 1332 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 A0A0U1RQG5 324 aaPredicted RBP15.7■□□□□ 0.1
VCL-205ENST00000478896 ADCY6O43306 1168 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 ALAS1P13196 640 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 MCCP23508 829 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 EPHB4P54760 987 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 IRX5P78411 483 aaPredicted RBP15.7■□□□□ 0.1
VCL-205ENST00000478896 CNTN2Q02246 1040 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 CTDSPL2Q05D32 466 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 GNASQ5JWF2 1037 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 CCSAPQ6IQ19 270 aaPredicted RBP15.7■□□□□ 0.1
VCL-205ENST00000478896 CCDC174Q6PII3 467 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 KCTD1Q719H9 257 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 STAG1Q8WVM7 1258 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 MYLIPQ8WY64 445 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 GMCL1Q96IK5 515 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 AGBL1Q96MI9 1066 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 LRRC37A2A6NM11 1700 aa15.7■□□□□ 0.1
VCL-205ENST00000478896 TLR3O15455 904 aaKnown RBP15.69■□□□□ 0.1
VCL-205ENST00000478896 FOSL2P15408 326 aa15.69■□□□□ 0.1
VCL-205ENST00000478896 GJA9P57773 515 aa15.69■□□□□ 0.1
VCL-205ENST00000478896 CCDC96Q2M329 555 aa15.69■□□□□ 0.1
VCL-205ENST00000478896 TKFCQ3LXA3 575 aa15.69■□□□□ 0.1
VCL-205ENST00000478896 MAFAQ8NHW3 353 aaPredicted RBP15.69■□□□□ 0.1
VCL-205ENST00000478896 TRERF1Q96PN7 1200 aa15.69■□□□□ 0.1
VCL-205ENST00000478896 UPF3AQ9H1J1 476 aaKnown RBP15.69■□□□□ 0.1
VCL-205ENST00000478896 TTYH1Q9H313 450 aaPredicted RBP15.69■□□□□ 0.1
VCL-205ENST00000478896 A1CFQ9NQ94 594 aaKnown RBP15.69■□□□□ 0.1
VCL-205ENST00000478896 TOMM22Q9NS69 142 aa15.69■□□□□ 0.1
VCL-205ENST00000478896 TMEM265A0A087WTH1 108 aa15.68■□□□□ 0.1
VCL-205ENST00000478896 ASB14A6NK59 587 aa15.68■□□□□ 0.1
VCL-205ENST00000478896 RANBP6O60518 1105 aaKnown RBP15.68■□□□□ 0.1
VCL-205ENST00000478896 TIMP1P01033 207 aa15.68■□□□□ 0.1
VCL-205ENST00000478896 TNFAIP2Q03169 654 aa15.68■□□□□ 0.1
VCL-205ENST00000478896 PPIGQ13427 754 aaKnown RBP eCLIP15.68■□□□□ 0.1
VCL-205ENST00000478896 TLK2Q86UE8 772 aa15.68■□□□□ 0.1
VCL-205ENST00000478896 FAM133AQ8N9E0 248 aa15.68■□□□□ 0.1
VCL-205ENST00000478896 TBX21Q9UL17 535 aa15.68■□□□□ 0.1
VCL-205ENST00000478896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.68■□□□□ 0.1
VCL-205ENST00000478896 ZNF536O15090 1300 aa15.68■□□□□ 0.1
VCL-205ENST00000478896 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.67■□□□□ 0.1
VCL-205ENST00000478896 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.67■□□□□ 0.1
VCL-205ENST00000478896 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.67■□□□□ 0.1
VCL-205ENST00000478896 ARVCFO00192 962 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 NMT2O60551 498 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 SNAP25P60880 206 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 BEX3Q00994 111 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 ANKRD45Q5TZF3 282 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 RCSD1Q6JBY9 416 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 MFSD5Q6N075 450 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 RASGRP2Q7LDG7 609 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 EVI5LQ96CN4 794 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 COL25A1Q9BXS0 654 aaPredicted RBP15.67■□□□□ 0.1
VCL-205ENST00000478896 PPP1R12CQ9BZL4 782 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 CCPG1Q9ULG6 757 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 PRR12Q9ULL5 1215 aa15.67■□□□□ 0.1
VCL-205ENST00000478896 PLA2G6O60733 806 aa15.66■□□□□ 0.1
VCL-205ENST00000478896 DNAJB2P25686 324 aa15.66■□□□□ 0.1
VCL-205ENST00000478896 RRP12Q5JTH9 1297 aaKnown RBP15.66■□□□□ 0.1
VCL-205ENST00000478896 VPS53Q5VIR6 699 aa15.66■□□□□ 0.1
VCL-205ENST00000478896 NSMFQ6X4W1 530 aa15.66■□□□□ 0.1
VCL-205ENST00000478896 EEPD1Q7L9B9 569 aa15.66■□□□□ 0.1
VCL-205ENST00000478896 TMEM199Q8N511 208 aa15.66■□□□□ 0.1
VCL-205ENST00000478896 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.66■□□□□ 0.16e-7■■□□□ 13.3
VCL-205ENST00000478896 KATNBL1Q9H079 304 aa15.66■□□□□ 0.1
VCL-205ENST00000478896 INCENPQ9NQS7 918 aa15.66■□□□□ 0.1
VCL-205ENST00000478896 IL17RBQ9NRM6 502 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms