RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 U2AF1L4Q8WU68 220 aaKnown RBP11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 SHISA4Q96DD7 197 aa11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 RANBP17Q9H2T7 1088 aaKnown RBP11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 KAT14Q9H8E8 782 aa11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 FBXO40Q9UH90 709 aa11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 ICAM1P05362 532 aa11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 ANTXR2P58335 489 aa11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 CCDC96Q2M329 555 aa11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 IFIT1BQ5T764 474 aaKnown RBP11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 SYDE2Q5VT97 1194 aa11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 MFSD14CQ5VZR4 134 aa11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 MSL3Q8N5Y2 521 aaKnown RBP11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 KCNB2Q92953 911 aa11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 MAML3Q96JK9 1138 aa11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 AGBL1Q96MI9 1066 aa11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 MMP19Q99542 508 aa11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 PNMA2Q9UL42 364 aa11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 CTDP1Q9Y5B0 961 aaPredicted RBP11.66□□□□□ -0.54
SCAMP3-206ENST00000478737 FRMPD2Q68DX3 1309 aaPredicted RBP11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 EPB41L2O43491 1005 aaKnown RBP11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 PGK2P07205 417 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 HSPA4P34932 840 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 SLC16A2P36021 539 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 TROAPQ12815 778 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 IKQ13123 557 aaPredicted RBP11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 ASPRV1Q53RT3 343 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 LHX8Q68G74 356 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 MAMDC4Q6UXC1 1216 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 CHMP4CQ96CF2 233 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 TBC1D32Q96NH3 1257 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 DEFB118Q96PH6 123 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 MAF1Q9H063 256 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 GPCPD1Q9NPB8 672 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 NRBP1Q9UHY1 535 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 OGDHLQ9ULD0 1010 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 MTMR7Q9Y216 660 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 BRCA2P51587 3418 aa11.65□□□□□ -0.54
SCAMP3-206ENST00000478737 PLXNB2O15031 1838 aa11.65□□□□□ -0.55
SCAMP3-206ENST00000478737 WDR19Q8NEZ3 1342 aa11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 PALM3A6NDB9 673 aaPredicted RBP11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 IFIT3O14879 490 aaKnown RBP11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 PARP1P09874 1014 aaKnown RBP11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 CYBAP13498 195 aa11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 CYP2C19P33261 490 aa11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 MCM5P33992 734 aa11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 SART3Q15020 963 aaKnown RBP11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 TMTC2Q8N394 836 aa11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 TRERF1Q96PN7 1200 aa11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 MAP3K14Q99558 947 aa11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 TINF2Q9BSI4 451 aa11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 ACAD9Q9H845 621 aa11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 SENP2Q9HC62 589 aa11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 ISY1Q9ULR0 285 aaKnown RBP11.64□□□□□ -0.55
SCAMP3-206ENST00000478737 BAZ2BQ9UIF8 2168 aaKnown RBP11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 ERICH2A1L162 156 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 GOLGA8HP0CJ92 632 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 CCND3P30281 292 aaPredicted RBP11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 LIFRP42702 1097 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 MNX1P50219 401 aaPredicted RBP11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 SNAP25P60880 206 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 COL9A3Q14050 684 aaPredicted RBP11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 KRT32Q14532 448 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 ANKRD35Q8N283 1001 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 FAM133AQ8N9E0 248 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 ANKLE1Q8NAG6 615 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 TRPV1Q8NER1 839 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 MTMR8Q96EF0 704 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 DDX11Q96FC9 970 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 TMEM87BQ96K49 555 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 FGD4Q96M96 766 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 UBA5Q9GZZ9 404 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 A1CFQ9NQ94 594 aaKnown RBP11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 RNF146Q9NTX7 359 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 MAD2L2Q9UI95 211 aa11.63□□□□□ -0.55
SCAMP3-206ENST00000478737 MSCO60682 206 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 TFRCP02786 760 aaKnown RBP11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 ALAS1P13196 640 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 EXOSC10Q01780 885 aaKnown RBP11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 GRM4Q14833 912 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 WTAPQ15007 396 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 TMEM67Q5HYA8 995 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 CCDC174Q6PII3 467 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 CHST3Q7LGC8 479 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 ADGRF4Q8IZF3 695 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 STAG2Q8N3U4 1231 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 RGS22Q8NE09 1264 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 CLEC4DQ8WXI8 215 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 USP26Q9BXU7 913 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 LY9Q9HBG7 655 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 CCPG1Q9ULG6 757 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 ZNF236Q9UL36 1845 aa11.62□□□□□ -0.55
SCAMP3-206ENST00000478737 PDE4DIPQ5VU43 2346 aa11.61□□□□□ -0.55
SCAMP3-206ENST00000478737 PFASO15067 1338 aa11.61□□□□□ -0.55
SCAMP3-206ENST00000478737 SYNGAP1Q96PV0 1343 aa11.61□□□□□ -0.55
SCAMP3-206ENST00000478737 MKI67P46013 3256 aaKnown RBP11.61□□□□□ -0.55
SCAMP3-206ENST00000478737 KLRF2D3W0D1 207 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms