RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 MSL3Q8N5Y2 521 aaKnown RBP27■■□□□ 1.91
C9orf3-216ENST00000478603 FGD4Q96M96 766 aa27■■□□□ 1.91
C9orf3-216ENST00000478603 AGBL1Q96MI9 1066 aa27■■□□□ 1.91
C9orf3-216ENST00000478603 FBXO40Q9UH90 709 aa27■■□□□ 1.91
C9orf3-216ENST00000478603 LTBP2Q14767 1821 aa27■■□□□ 1.91
C9orf3-216ENST00000478603 FDX1P10109 184 aa26.99■■□□□ 1.91
C9orf3-216ENST00000478603 SDSP20132 328 aa26.99■■□□□ 1.91
C9orf3-216ENST00000478603 TRIM60Q495X7 471 aa26.99■■□□□ 1.91
C9orf3-216ENST00000478603 RCSD1Q6JBY9 416 aa26.99■■□□□ 1.91
C9orf3-216ENST00000478603 TICAM2Q86XR7 235 aa26.99■■□□□ 1.91
C9orf3-216ENST00000478603 ZHX1Q9UKY1 873 aaPredicted RBP26.99■■□□□ 1.91
C9orf3-216ENST00000478603 NOVP48745 357 aa26.98■■□□□ 1.91
C9orf3-216ENST00000478603 CCDC174Q6PII3 467 aa26.98■■□□□ 1.91
C9orf3-216ENST00000478603 ZNF467Q7Z7K2 595 aaPredicted RBP26.98■■□□□ 1.91
C9orf3-216ENST00000478603 SNX17Q15036 470 aa26.97■■□□□ 1.91
C9orf3-216ENST00000478603 CCDC96Q2M329 555 aa26.97■■□□□ 1.91
C9orf3-216ENST00000478603 RNF180Q86T96 592 aa26.97■■□□□ 1.91
C9orf3-216ENST00000478603 LBHD1Q9BQE6 289 aaPredicted RBP26.97■■□□□ 1.91
C9orf3-216ENST00000478603 OSBPL3Q9H4L5 887 aa26.97■■□□□ 1.91
C9orf3-216ENST00000478603 ACAD9Q9H845 621 aa26.97■■□□□ 1.91
C9orf3-216ENST00000478603 RNF146Q9NTX7 359 aa26.97■■□□□ 1.91
C9orf3-216ENST00000478603 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.97■■□□□ 1.91
C9orf3-216ENST00000478603 PRKAG2Q9UGJ0 569 aa26.97■■□□□ 1.91
C9orf3-216ENST00000478603 PRR12Q9ULL5 1215 aa26.97■■□□□ 1.91
C9orf3-216ENST00000478603 PHF24Q9UPV7 400 aa26.97■■□□□ 1.91
C9orf3-216ENST00000478603 ZMYM6O95789 1325 aa26.96■■□□□ 1.91
C9orf3-216ENST00000478603 PLA2G6O60733 806 aa26.96■■□□□ 1.91
C9orf3-216ENST00000478603 CNTN2Q02246 1040 aa26.96■■□□□ 1.91
C9orf3-216ENST00000478603 PRDM5Q9NQX1 630 aaPredicted RBP26.96■■□□□ 1.91
C9orf3-216ENST00000478603 FAM184BQ9ULE4 1060 aa26.96■■□□□ 1.91
C9orf3-216ENST00000478603 ADAMTS4O75173 837 aa26.95■■□□□ 1.9
C9orf3-216ENST00000478603 ALAS1P13196 640 aa26.95■■□□□ 1.9
C9orf3-216ENST00000478603 ACVR2BQ13705 512 aa26.95■■□□□ 1.9
C9orf3-216ENST00000478603 LRIT3Q3SXY7 679 aa26.95■■□□□ 1.9
C9orf3-216ENST00000478603 ARMCX2Q7L311 632 aa26.95■■□□□ 1.9
C9orf3-216ENST00000478603 TRERF1Q96PN7 1200 aa26.95■■□□□ 1.9
C9orf3-216ENST00000478603 A1CFQ9NQ94 594 aaKnown RBP26.95■■□□□ 1.9
C9orf3-216ENST00000478603 SYNRGQ9UMZ2 1314 aa26.94■■□□□ 1.9
C9orf3-216ENST00000478603 TTBK2Q6IQ55 1244 aa26.94■■□□□ 1.9
C9orf3-216ENST00000478603 TBC1D10CQ8IV04 446 aa26.94■■□□□ 1.9
C9orf3-216ENST00000478603 DCAF4Q8WV16 495 aa26.94■■□□□ 1.9
C9orf3-216ENST00000478603 TMEM47Q9BQJ4 181 aa26.94■■□□□ 1.9
C9orf3-216ENST00000478603 A0A1W2PQ45 241 aaPredicted RBP26.93■■□□□ 1.9
C9orf3-216ENST00000478603 A0A1W2PQY0 241 aa26.93■■□□□ 1.9
C9orf3-216ENST00000478603 POTEB2H3BUK9 544 aa26.93■■□□□ 1.9
C9orf3-216ENST00000478603 ADCY6O43306 1168 aa26.93■■□□□ 1.9
C9orf3-216ENST00000478603 TOP1P11387 765 aaKnown RBP26.93■■□□□ 1.9
C9orf3-216ENST00000478603 SLC16A2P36021 539 aa26.93■■□□□ 1.9
C9orf3-216ENST00000478603 AKNAD1Q5T1N1 836 aa26.93■■□□□ 1.9
C9orf3-216ENST00000478603 CWC27Q6UX04 472 aaKnown RBP26.93■■□□□ 1.9
C9orf3-216ENST00000478603 CCDC144CPQ8IYA2 1237 aa26.93■■□□□ 1.9
C9orf3-216ENST00000478603 FAM133AQ8N9E0 248 aa26.93■■□□□ 1.9
C9orf3-216ENST00000478603 ABHD16BQ9H3Z7 469 aa26.93■■□□□ 1.9
C9orf3-216ENST00000478603 TCP11L1Q9NUJ3 509 aa26.93■■□□□ 1.9
C9orf3-216ENST00000478603 SUPT16HQ9Y5B9 1047 aaKnown RBP26.93■■□□□ 1.9
C9orf3-216ENST00000478603 FRMPD2Q68DX3 1309 aaPredicted RBP26.92■■□□□ 1.9
C9orf3-216ENST00000478603 MYADML2A6NDP7 307 aa26.92■■□□□ 1.9
C9orf3-216ENST00000478603 IRX5P78411 483 aaPredicted RBP26.92■■□□□ 1.9
C9orf3-216ENST00000478603 TLE2Q04725 743 aa26.92■■□□□ 1.9
C9orf3-216ENST00000478603 TKFCQ3LXA3 575 aa26.92■■□□□ 1.9
C9orf3-216ENST00000478603 CCDC144BQ3MJ40 725 aa26.92■■□□□ 1.9
C9orf3-216ENST00000478603 MUM1L1Q5H9M0 696 aa26.92■■□□□ 1.9
C9orf3-216ENST00000478603 C1orf53Q5VUE5 145 aa26.92■■□□□ 1.9
C9orf3-216ENST00000478603 MFSD6Q6ZSS7 791 aa26.92■■□□□ 1.9
C9orf3-216ENST00000478603 SH3RF1Q7Z6J0 888 aa26.92■■□□□ 1.9
C9orf3-216ENST00000478603 PDLIM7Q9NR12 457 aa26.92■■□□□ 1.9
C9orf3-216ENST00000478603 LAMA4Q16363 1823 aa26.92■■□□□ 1.9
C9orf3-216ENST00000478603 LCTP09848 1927 aa26.92■■□□□ 1.9
C9orf3-216ENST00000478603 MFAP1P55081 439 aaKnown RBP26.91■■□□□ 1.9
C9orf3-216ENST00000478603 GPCPD1Q9NPB8 672 aa26.91■■□□□ 1.9
C9orf3-216ENST00000478603 DIAPH3Q9NSV4 1193 aa26.91■■□□□ 1.9
C9orf3-216ENST00000478603 CCPG1Q9ULG6 757 aa26.91■■□□□ 1.9
C9orf3-216ENST00000478603 TRIM43BA6NCK2 446 aa26.9■■□□□ 1.9
C9orf3-216ENST00000478603 SOWAHBA6NEL2 793 aa26.9■■□□□ 1.9
C9orf3-216ENST00000478603 DUSP11O75319 330 aaKnown RBP26.9■■□□□ 1.9
C9orf3-216ENST00000478603 ACLYP53396 1101 aa26.9■■□□□ 1.9
C9orf3-216ENST00000478603 KLHDC9Q8NEP7 349 aa26.9■■□□□ 1.9
C9orf3-216ENST00000478603 TRIM43Q96BQ3 446 aaPredicted RBP26.9■■□□□ 1.9
C9orf3-216ENST00000478603 KATNBL1Q9H079 304 aa26.9■■□□□ 1.9
C9orf3-216ENST00000478603 DDX49Q9Y6V7 483 aaKnown RBP26.9■■□□□ 1.9
C9orf3-216ENST00000478603 NEDD4P46934 1319 aa26.9■■□□□ 1.9
C9orf3-216ENST00000478603 KCNA10Q16322 511 aa26.89■■□□□ 1.9
C9orf3-216ENST00000478603 SYDE2Q5VT97 1194 aa26.89■■□□□ 1.9
C9orf3-216ENST00000478603 BADQ92934 168 aa26.89■■□□□ 1.9
C9orf3-216ENST00000478603 TSEN34Q9BSV6 310 aaKnown RBP26.89■■□□□ 1.9
C9orf3-216ENST00000478603 RANBP17Q9H2T7 1088 aaKnown RBP26.89■■□□□ 1.9
C9orf3-216ENST00000478603 LRRC37A2A6NM11 1700 aa26.88■■□□□ 1.89
C9orf3-216ENST00000478603 ICAM1P05362 532 aa26.88■■□□□ 1.89
C9orf3-216ENST00000478603 C6orf222P0C671 652 aaPredicted RBP26.88■■□□□ 1.89
C9orf3-216ENST00000478603 PDHBP11177 359 aa26.88■■□□□ 1.89
C9orf3-216ENST00000478603 CCSAPQ6IQ19 270 aaPredicted RBP26.88■■□□□ 1.89
C9orf3-216ENST00000478603 BTNL9Q6UXG8 535 aa26.88■■□□□ 1.89
C9orf3-216ENST00000478603 Q7L0L9 218 aa26.88■■□□□ 1.89
C9orf3-216ENST00000478603 ZKSCAN3Q9BRR0 538 aa26.88■■□□□ 1.89
C9orf3-216ENST00000478603 CYP39A1Q9NYL5 469 aa26.88■■□□□ 1.89
C9orf3-216ENST00000478603 ASTN1O14525 1302 aa26.88■■□□□ 1.89
C9orf3-216ENST00000478603 ZNF213O14771 459 aa26.87■■□□□ 1.89
C9orf3-216ENST00000478603 PQBP1O60828 265 aaKnown RBP26.87■■□□□ 1.89
C9orf3-216ENST00000478603 PCP11498 1178 aaKnown RBP26.87■■□□□ 1.89
C9orf3-216ENST00000478603 NSMFQ6X4W1 530 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 772.3 ms