RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 SGPL1O95470 568 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 CTDNEP1O95476 244 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 SLC1A4P43007 532 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 PPIL2Q13356 520 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 SNAPC2Q13487 334 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 TMTC3Q6ZXV5 915 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 KCTD1Q719H9 257 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 MAP3K14Q99558 947 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 KIAA1683Q9H0B3 1180 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 CPVLQ9H3G5 476 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 STXBP5LQ9Y2K9 1186 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 AFG3L2Q9Y4W6 797 aa13.58□□□□□ -0.24
PDCD11-204ENST00000478543 CCDC196A0A1B0GTZ2 297 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 PTPDC1A2A3K4 754 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 PALM3A6NDB9 673 aaPredicted RBP13.57□□□□□ -0.24
PDCD11-204ENST00000478543 PDHXO00330 501 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 FMNL1O95466 1100 aaPredicted RBP13.57□□□□□ -0.24
PDCD11-204ENST00000478543 SNHG28P0DPA3 235 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 ELNP15502 786 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 USP14P54578 494 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 HMGCS2P54868 508 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 BACE1P56817 501 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 PPATQ06203 517 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 ZNF543Q08ER8 600 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 ASPRV1Q53RT3 343 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 FAM83BQ5T0W9 1011 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 TTBK2Q6IQ55 1244 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 CPLX2Q6PUV4 134 aaKnown RBP13.57□□□□□ -0.24
PDCD11-204ENST00000478543 NSUN7Q8NE18 718 aaKnown RBP13.57□□□□□ -0.24
PDCD11-204ENST00000478543 PIBF1Q8WXW3 757 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 PHKBQ93100 1093 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 DDX11Q96FC9 970 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 EMILIN3Q9NT22 766 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 SYNPO2Q9UMS6 1093 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 SMC3Q9UQE7 1217 aa13.57□□□□□ -0.24
PDCD11-204ENST00000478543 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.57□□□□□ -0.24
PDCD11-204ENST00000478543 KLRF2D3W0D1 207 aa13.56□□□□□ -0.24
PDCD11-204ENST00000478543 CDKL5O76039 1030 aa13.56□□□□□ -0.24
PDCD11-204ENST00000478543 BCRP11274 1271 aa13.56□□□□□ -0.24
PDCD11-204ENST00000478543 BMP3P12645 472 aa13.56□□□□□ -0.24
PDCD11-204ENST00000478543 GNAQP50148 359 aa13.56□□□□□ -0.24
PDCD11-204ENST00000478543 IKQ13123 557 aaPredicted RBP13.56□□□□□ -0.24
PDCD11-204ENST00000478543 NTRK3Q16288 839 aa13.56□□□□□ -0.24
PDCD11-204ENST00000478543 SAMD1Q6SPF0 538 aaPredicted RBP13.56□□□□□ -0.24
PDCD11-204ENST00000478543 SRBD1Q8N5C6 995 aaKnown RBP13.56□□□□□ -0.24
PDCD11-204ENST00000478543 INTS4Q96HW7 963 aaKnown RBP13.56□□□□□ -0.24
PDCD11-204ENST00000478543 GMCL1Q96IK5 515 aa13.56□□□□□ -0.24
PDCD11-204ENST00000478543 PAWRQ96IZ0 340 aaKnown RBP13.56□□□□□ -0.24
PDCD11-204ENST00000478543 LLPHQ9BRT6 129 aaKnown RBP13.56□□□□□ -0.24
PDCD11-204ENST00000478543 SLC26A6Q9BXS9 759 aa13.56□□□□□ -0.24
PDCD11-204ENST00000478543 UBA5Q9GZZ9 404 aa13.56□□□□□ -0.24
PDCD11-204ENST00000478543 BIN2Q9UBW5 565 aaPredicted RBP13.56□□□□□ -0.24
PDCD11-204ENST00000478543 CNTNAP5Q8WYK1 1306 aa13.56□□□□□ -0.24
PDCD11-204ENST00000478543 hCG_1642624A0A1W2PR95 340 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 C19orf81C9J6K1 198 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 TMEM232C9JQI7 657 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 INHAP05111 366 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 CYP2C8P10632 490 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 IFNAR1P17181 557 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 GJB2P29033 226 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 BMP8BP34820 402 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 SLC16A2P36021 539 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 FOSBP53539 338 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 SSRP1Q08945 709 aaKnown RBP13.55□□□□□ -0.24
PDCD11-204ENST00000478543 PPP2R5BQ15173 497 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 SLC35G1Q2M3R5 365 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 GPATCH4Q5T3I0 446 aaKnown RBP13.55□□□□□ -0.24
PDCD11-204ENST00000478543 GPAT2Q6NUI2 795 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 GADL1Q6ZQY3 521 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 ANKRD23Q86SG2 305 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 SMARCC2Q8TAQ2 1214 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 DEFB118Q96PH6 123 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 VAT1LQ9HCJ6 419 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 PAK6Q9NQU5 681 aaPredicted RBP13.55□□□□□ -0.24
PDCD11-204ENST00000478543 TMOD4Q9NZQ9 345 aa13.55□□□□□ -0.24
PDCD11-204ENST00000478543 ZMYND8Q9ULU4 1186 aaPredicted RBP13.55□□□□□ -0.24
PDCD11-204ENST00000478543 WDR46O15213 610 aaKnown RBP13.54□□□□□ -0.24
PDCD11-204ENST00000478543 VCAM1P19320 739 aa13.54□□□□□ -0.24
PDCD11-204ENST00000478543 UBXN2AP68543 259 aa13.54□□□□□ -0.24
PDCD11-204ENST00000478543 FUT2Q10981 343 aa13.54□□□□□ -0.24
PDCD11-204ENST00000478543 GPR153Q6NV75 609 aa13.54□□□□□ -0.24
PDCD11-204ENST00000478543 C7orf61Q8IZ16 206 aa13.54□□□□□ -0.24
PDCD11-204ENST00000478543 SLAIN1Q8ND83 568 aa13.54□□□□□ -0.24
PDCD11-204ENST00000478543 LPAR1Q92633 364 aa13.54□□□□□ -0.24
PDCD11-204ENST00000478543 LZTS2Q9BRK4 669 aa13.54□□□□□ -0.24
PDCD11-204ENST00000478543 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
PDCD11-204ENST00000478543 CRISPLD2Q9H0B8 497 aa13.54□□□□□ -0.24
PDCD11-204ENST00000478543 RPAP3Q9H6T3 665 aaPredicted RBP13.54□□□□□ -0.24
PDCD11-204ENST00000478543 ORC3Q9UBD5 711 aaPredicted RBP13.54□□□□□ -0.24
PDCD11-204ENST00000478543 KCNH4Q9UQ05 1017 aa13.54□□□□□ -0.24
PDCD11-204ENST00000478543 A0A0G2JLL6 359 aaPredicted RBP13.53□□□□□ -0.24
PDCD11-204ENST00000478543 CXCL11O14625 94 aa13.53□□□□□ -0.24
PDCD11-204ENST00000478543 CYTH3O43739 400 aa13.53□□□□□ -0.24
PDCD11-204ENST00000478543 FDPSP14324 419 aaKnown RBP13.53□□□□□ -0.24
PDCD11-204ENST00000478543 SYN1P17600 705 aa13.53□□□□□ -0.24
PDCD11-204ENST00000478543 FLT3LGP49771 235 aa13.53□□□□□ -0.24
PDCD11-204ENST00000478543 HMGN5P82970 282 aaKnown RBP13.53□□□□□ -0.24
PDCD11-204ENST00000478543 AKAP17AQ02040 695 aaKnown RBP13.53□□□□□ -0.24
PDCD11-204ENST00000478543 LRIT3Q3SXY7 679 aa13.53□□□□□ -0.24
PDCD11-204ENST00000478543 SH3D19Q5HYK7 790 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms