RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 ISY1Q9ULR0 285 aaKnown RBP12.82□□□□□ -0.36
VANGL1-206ENST00000478369 HIP1O00291 1037 aa12.81□□□□□ -0.36
VANGL1-206ENST00000478369 SNAI1O95863 264 aaPredicted RBP12.81□□□□□ -0.36
VANGL1-206ENST00000478369 TAL1P17542 331 aaPredicted RBP12.81□□□□□ -0.36
VANGL1-206ENST00000478369 SDSP20132 328 aa12.81□□□□□ -0.36
VANGL1-206ENST00000478369 SLC4A3P48751 1232 aa12.81□□□□□ -0.36
VANGL1-206ENST00000478369 B4GALNT3Q6L9W6 998 aa12.81□□□□□ -0.36
VANGL1-206ENST00000478369 ZNF589Q86UQ0 364 aaPredicted RBP12.81□□□□□ -0.36
VANGL1-206ENST00000478369 TTC14Q96N46 770 aa12.81□□□□□ -0.36
VANGL1-206ENST00000478369 RNF41Q9H4P4 317 aaPredicted RBP12.81□□□□□ -0.36
VANGL1-206ENST00000478369 INCENPQ9NQS7 918 aa12.81□□□□□ -0.36
VANGL1-206ENST00000478369 TOMM22Q9NS69 142 aa12.81□□□□□ -0.36
VANGL1-206ENST00000478369 ATP11BQ9Y2G3 1177 aa12.81□□□□□ -0.36
VANGL1-206ENST00000478369 TACC3Q9Y6A5 838 aa12.81□□□□□ -0.36
VANGL1-206ENST00000478369 ZNF536O15090 1300 aa12.81□□□□□ -0.36
VANGL1-206ENST00000478369 MOXD2PA6NHM9 499 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 SOX1O00570 391 aaPredicted RBP12.8□□□□□ -0.36
VANGL1-206ENST00000478369 NMT2O60551 498 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 ADAMTS4O75173 837 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 DUSP11O75319 330 aaKnown RBP12.8□□□□□ -0.36
VANGL1-206ENST00000478369 PGK1P00558 417 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 MYCNP04198 464 aaPredicted RBP12.8□□□□□ -0.36
VANGL1-206ENST00000478369 TOP1P11387 765 aaKnown RBP12.8□□□□□ -0.36
VANGL1-206ENST00000478369 IRX6P78412 446 aaPredicted RBP12.8□□□□□ -0.36
VANGL1-206ENST00000478369 MDM2Q00987 491 aaPredicted RBP12.8□□□□□ -0.36
VANGL1-206ENST00000478369 ACVR2BQ13705 512 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 AKNAD1Q5T1N1 836 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 BTNL9Q6UXG8 535 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 MFSD6Q6ZSS7 791 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 KCTD1Q719H9 257 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 NUP133Q8WUM0 1156 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 RNF146Q9NTX7 359 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.8□□□□□ -0.36
VANGL1-206ENST00000478369 PNMA2Q9UL42 364 aa12.8□□□□□ -0.36
VANGL1-206ENST00000478369 SMCHD1A6NHR9 2005 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 ASB14A6NK59 587 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 POTEB2H3BUK9 544 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 CST5P28325 142 aaPredicted RBP12.79□□□□□ -0.36
VANGL1-206ENST00000478369 TRIM60Q495X7 471 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 CCDC178Q5BJE1 867 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 ARMCX2Q7L311 632 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 FAM133AQ8N9E0 248 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 KLHDC9Q8NEP7 349 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 LRCH3Q96II8 777 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 FGD4Q96M96 766 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 AGBL1Q96MI9 1066 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 TRERF1Q96PN7 1200 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 SPC25Q9HBM1 224 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 A1CFQ9NQ94 594 aaKnown RBP12.79□□□□□ -0.36
VANGL1-206ENST00000478369 HOMER2Q9NSB8 354 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 ZHX1Q9UKY1 873 aaPredicted RBP12.79□□□□□ -0.36
VANGL1-206ENST00000478369 PRR12Q9ULL5 1215 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 SYNRGQ9UMZ2 1314 aa12.79□□□□□ -0.36
VANGL1-206ENST00000478369 A0A1W2PQ45 241 aaPredicted RBP12.78□□□□□ -0.36
VANGL1-206ENST00000478369 A0A1W2PQY0 241 aa12.78□□□□□ -0.36
VANGL1-206ENST00000478369 ZNF213O14771 459 aa12.78□□□□□ -0.36
VANGL1-206ENST00000478369 ICAM1P05362 532 aa12.78□□□□□ -0.36
VANGL1-206ENST00000478369 ALAS1P13196 640 aa12.78□□□□□ -0.36
VANGL1-206ENST00000478369 CCDC96Q2M329 555 aa12.78□□□□□ -0.36
VANGL1-206ENST00000478369 CCDC144BQ3MJ40 725 aa12.78□□□□□ -0.36
VANGL1-206ENST00000478369 RRP12Q5JTH9 1297 aaKnown RBP12.78□□□□□ -0.36
VANGL1-206ENST00000478369 PCSK9Q8NBP7 692 aaKnown RBP12.78□□□□□ -0.36
VANGL1-206ENST00000478369 ESR2Q92731 530 aa12.78□□□□□ -0.36
VANGL1-206ENST00000478369 FERMT2Q96AC1 680 aa12.78□□□□□ -0.36
VANGL1-206ENST00000478369 TOX2Q96NM4 488 aa12.78□□□□□ -0.36
VANGL1-206ENST00000478369 TMEM47Q9BQJ4 181 aa12.78□□□□□ -0.36
VANGL1-206ENST00000478369 RANBP17Q9H2T7 1088 aaKnown RBP12.78□□□□□ -0.36
VANGL1-206ENST00000478369 DIAPH3Q9NSV4 1193 aa12.78□□□□□ -0.36
VANGL1-206ENST00000478369 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 ACLYP53396 1101 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 GJA9P57773 515 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 NKX3-2P78367 333 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.37
VANGL1-206ENST00000478369 CCSAPQ6IQ19 270 aaPredicted RBP12.77□□□□□ -0.37
VANGL1-206ENST00000478369 CCDC174Q6PII3 467 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 ANKRD33Q7Z3H0 272 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 DGKHQ86XP1 1220 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 CCDC144CPQ8IYA2 1237 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 DSCC1Q9BVC3 393 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 KATNBL1Q9H079 304 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 UPF3AQ9H1J1 476 aaKnown RBP12.77□□□□□ -0.37
VANGL1-206ENST00000478369 PDLIM7Q9NR12 457 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 CYP39A1Q9NYL5 469 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 CTNNA3Q9UI47 895 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 CCPG1Q9ULG6 757 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 ELP1O95163 1332 aa12.77□□□□□ -0.37
VANGL1-206ENST00000478369 CLTBP09497 229 aa12.76□□□□□ -0.37
VANGL1-206ENST00000478369 SNHG28P0DPA3 235 aa12.76□□□□□ -0.37
VANGL1-206ENST00000478369 PDHBP11177 359 aa12.76□□□□□ -0.37
VANGL1-206ENST00000478369 HAND2P61296 217 aa12.76□□□□□ -0.37
VANGL1-206ENST00000478369 CNTN2Q02246 1040 aa12.76□□□□□ -0.37
VANGL1-206ENST00000478369 TLE2Q04725 743 aa12.76□□□□□ -0.37
VANGL1-206ENST00000478369 KCNA10Q16322 511 aa12.76□□□□□ -0.37
VANGL1-206ENST00000478369 GPATCH4Q5T3I0 446 aaKnown RBP12.76□□□□□ -0.37
VANGL1-206ENST00000478369 SYDE2Q5VT97 1194 aa12.76□□□□□ -0.37
VANGL1-206ENST00000478369 CWC27Q6UX04 472 aaKnown RBP12.76□□□□□ -0.37
VANGL1-206ENST00000478369 IQCA1Q86XH1 822 aa12.76□□□□□ -0.37
VANGL1-206ENST00000478369 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
VANGL1-206ENST00000478369 GLT1D1Q96MS3 346 aa12.76□□□□□ -0.37
VANGL1-206ENST00000478369 MAF1Q9H063 256 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms