RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
CBWD3-206ENST00000478048 FLOT1O75955 427 aa13.37□□□□□ -0.27
CBWD3-206ENST00000478048 RABEP1Q15276 862 aa13.37□□□□□ -0.27
CBWD3-206ENST00000478048 ALDH8A1Q9H2A2 487 aaPredicted RBP13.37□□□□□ -0.27
CBWD3-206ENST00000478048 CPVLQ9H3G5 476 aa13.37□□□□□ -0.27
CBWD3-206ENST00000478048 MAD2L2Q9UI95 211 aa13.37□□□□□ -0.27
CBWD3-206ENST00000478048 NAP1L2Q9ULW6 460 aaPredicted RBP13.37□□□□□ -0.27
CBWD3-206ENST00000478048 PEX10O60683 326 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 DDAH1O94760 285 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 PARP1P09874 1014 aaKnown RBP13.36□□□□□ -0.27
CBWD3-206ENST00000478048 SLC16A2P36021 539 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 IRX3P78415 501 aaPredicted RBP13.36□□□□□ -0.27
CBWD3-206ENST00000478048 GRM4Q14833 912 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 TAF1CQ15572 869 aaPredicted RBP13.36□□□□□ -0.27
CBWD3-206ENST00000478048 OTUD7BQ6GQQ9 843 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 ZBED2Q9BTP6 218 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 UBA5Q9GZZ9 404 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 R3HDMLQ9H3Y0 253 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 RNF186Q9NXI6 227 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 HPS5Q9UPZ3 1129 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 SLC45A1Q9Y2W3 748 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 PALM3A6NDB9 673 aaPredicted RBP13.36□□□□□ -0.27
CBWD3-206ENST00000478048 ZBTB43O43298 467 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 TRPA1O75762 1119 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 CD2BP2O95400 341 aaKnown RBP13.36□□□□□ -0.27
CBWD3-206ENST00000478048 STAT2P52630 851 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 EVCP57679 992 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 PABPC4Q13310 644 aaKnown RBP eCLIP13.36□□□□□ -0.27
CBWD3-206ENST00000478048 COG2Q14746 738 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 ZCCHC17Q9NP64 241 aaKnown RBP13.36□□□□□ -0.27
CBWD3-206ENST00000478048 FEM1BQ9UK73 627 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 TPCN1Q9ULQ1 816 aa13.36□□□□□ -0.27
CBWD3-206ENST00000478048 SPDYE16A6NNV3 312 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-206ENST00000478048 GOLGA8BA8MQT2 603 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 BHMG1C9JSJ3 638 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-206ENST00000478048 LARGE1O95461 756 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 TBC1D8O95759 1140 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 OSBPP22059 807 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 PDIA3P30101 505 aaKnown RBP13.35□□□□□ -0.27
CBWD3-206ENST00000478048 CDC27P30260 824 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 HERVK_113P62684 666 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-206ENST00000478048 CRHR2Q13324 411 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 SLC35G1Q2M3R5 365 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 ASPRV1Q53RT3 343 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 GPATCH4Q5T3I0 446 aaKnown RBP13.35□□□□□ -0.27
CBWD3-206ENST00000478048 SYNE3Q6ZMZ3 975 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 NBPF11Q86T75 865 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
CBWD3-206ENST00000478048 FANCBQ8NB91 859 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 KIFC2Q96AC6 838 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 ATG4CQ96DT6 458 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 FAM217BQ9NTX9 383 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-206ENST00000478048 PNMA3Q9UL41 463 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 PPP1R9AQ9ULJ8 1098 aa13.35□□□□□ -0.27
CBWD3-206ENST00000478048 COL11A1P12107 1806 aaPredicted RBP13.34□□□□□ -0.27
CBWD3-206ENST00000478048 KLRF2D3W0D1 207 aa13.34□□□□□ -0.27
CBWD3-206ENST00000478048 CA12O43570 354 aa13.34□□□□□ -0.27
CBWD3-206ENST00000478048 PLEKHA8P1O95397 391 aa13.34□□□□□ -0.27
CBWD3-206ENST00000478048 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
CBWD3-206ENST00000478048 SNAP25P60880 206 aa13.34□□□□□ -0.27
CBWD3-206ENST00000478048 CCT2P78371 535 aaKnown RBP13.34□□□□□ -0.27
CBWD3-206ENST00000478048 MAP2K1Q02750 393 aaPredicted RBP13.34□□□□□ -0.27
CBWD3-206ENST00000478048 STK3Q13188 491 aa13.34□□□□□ -0.27
CBWD3-206ENST00000478048 BTNL9Q6UXG8 535 aa13.34□□□□□ -0.27
CBWD3-206ENST00000478048 CTCFLQ8NI51 663 aaPredicted RBP13.34□□□□□ -0.27
CBWD3-206ENST00000478048 PARK7Q99497 189 aaKnown RBP13.34□□□□□ -0.27
CBWD3-206ENST00000478048 MAP3K14Q99558 947 aa13.34□□□□□ -0.27
CBWD3-206ENST00000478048 SLF1Q9BQI6 1058 aa13.34□□□□□ -0.27
CBWD3-206ENST00000478048 ADAM33Q9BZ11 813 aa13.34□□□□□ -0.27
CBWD3-206ENST00000478048 ADGRA2Q96PE1 1338 aa13.34□□□□□ -0.27
CBWD3-206ENST00000478048 GOLGA8AA7E2F4 631 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 PLA2G6O60733 806 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 CALM1P0DP23 149 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 CALM2P0DP24 149 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 CALM3P0DP25 149 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 ADD1P35611 737 aaKnown RBP13.33□□□□□ -0.27
CBWD3-206ENST00000478048 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.27
CBWD3-206ENST00000478048 ANKRD1Q15327 319 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 ME3Q16798 604 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 FAM160B2Q86V87 743 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 JMYQ8N9B5 988 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 PRPF38AQ8NAV1 312 aaKnown RBP13.33□□□□□ -0.27
CBWD3-206ENST00000478048 SMCR8Q8TEV9 937 aaPredicted RBP13.33□□□□□ -0.27
CBWD3-206ENST00000478048 CHURC1Q8WUH1 139 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 ZNF274Q96GC6 653 aaPredicted RBP13.33□□□□□ -0.27
CBWD3-206ENST00000478048 ZFYVE28Q9HCC9 887 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 NCOA5Q9HCD5 579 aaKnown RBP13.33□□□□□ -0.27
CBWD3-206ENST00000478048 TXNRD2Q9NNW7 524 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 WBP1LQ9NX94 342 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 HOXC10Q9NYD6 342 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 CPA4Q9UI42 421 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 PRR12Q9ULL5 1215 aa13.33□□□□□ -0.27
CBWD3-206ENST00000478048 SMCHD1A6NHR9 2005 aa13.33□□□□□ -0.28
CBWD3-206ENST00000478048 CYTH3O43739 400 aa13.33□□□□□ -0.28
CBWD3-206ENST00000478048 TLR2O60603 784 aa13.33□□□□□ -0.28
CBWD3-206ENST00000478048 KIF5BP33176 963 aa13.33□□□□□ -0.28
CBWD3-206ENST00000478048 RTN1Q16799 776 aa13.33□□□□□ -0.28
CBWD3-206ENST00000478048 SYDE2Q5VT97 1194 aa13.33□□□□□ -0.28
CBWD3-206ENST00000478048 CCDC82Q8N4S0 544 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms