RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CREBRFQ8IUR6 639 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 Q8N3U1 123 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 SLC43A3Q8NBI5 491 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 C1orf131Q8NDD1 294 aaKnown RBP4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 OR6P1Q8NGX9 317 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 PIWIL2Q8TC59 973 aaKnown RBP4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 ENOX1Q8TC92 643 aaKnown RBP4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 IL17RAQ96F46 866 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 HRASLS5Q96KN8 279 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 PAGR1Q9BTK6 254 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 YY1AP1Q9H869 796 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 CWC25Q9NXE8 425 aaPredicted RBP4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 VAV3Q9UKW4 847 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 SLC5A6Q9Y289 635 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 CAPN6Q9Y6Q1 641 aa4.33□□□□□ -1.72
FNDC3B-209ENST00000478016 NESP48681 1621 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 THOC2Q8NI27 1593 aaKnown RBP4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 CUX2O14529 1486 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 NCAPD3P42695 1498 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 BAZ1BQ9UIG0 1483 aaKnown RBP4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 PRC1O43663 620 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 CLEC3AO75596 197 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 GUCY2CP25092 1073 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 HSD3B2P26439 372 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 SSR1P43307 286 aaKnown RBP4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 GIPRP48546 466 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 PSMC1P62191 440 aaKnown RBP4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 MAP2K1Q02750 393 aaPredicted RBP4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 ARID5AQ03989 594 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 UBE4AQ14139 1066 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 ZRSR2Q15696 482 aaKnown RBP4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 CDKAL1Q5VV42 579 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 KRT77Q7Z794 578 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 DRC7Q8IY82 874 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 BCL7CQ8WUZ0 217 aaPredicted RBP4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 STAG1Q8WVM7 1258 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 ASB11Q8WXH4 323 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 DHRS1Q96LJ7 313 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 C8orf48Q96LL4 319 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 FBXL18Q96ME1 805 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 SLC9A7Q96T83 725 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 RETREG1Q9H6L5 497 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 PCDH12Q9NPG4 1184 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 CCDC39Q9UFE4 941 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 ANAPC4Q9UJX5 808 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 KCNH3Q9ULD8 1083 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 COL4A3BPQ9Y5P4 624 aa4.32□□□□□ -1.72
FNDC3B-209ENST00000478016 COL17A1Q9UMD9 1497 aaPredicted RBP4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 SSBP05455 408 aaKnown RBP eCLIP4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 FAM163BP0C2L3 166 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 ACRP10323 421 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 TNK2Q07912 1038 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 SLC20A2Q08357 652 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 DHX8Q14562 1220 aaKnown RBP4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 VPS72Q15906 364 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 AOC3Q16853 763 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 RUFY4Q6ZNE9 571 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 THAP5Q7Z6K1 395 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 RPAINQ86UA6 219 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 C19orf47Q8N9M1 422 aaKnown RBP4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 DTWD2Q8NBA8 298 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 FLCNQ8NFG4 579 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 RUNDC1Q96C34 613 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 SHDQ96IW2 340 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 HSPA12BQ96MM6 686 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 TTC14Q96N46 770 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 SLC6A18Q96N87 628 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 PIF1Q9H611 641 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 TYW1Q9NV66 732 aaKnown RBP4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 DDX56Q9NY93 547 aaKnown RBP4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 PUF60Q9UHX1 559 aaKnown RBP4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 ST14Q9Y5Y6 855 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 SLC12A7Q9Y666 1083 aa4.31□□□□□ -1.72
FNDC3B-209ENST00000478016 PITPNM2Q9BZ72 1349 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 KIF21AQ7Z4S6 1674 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 FAM86C2PA6NEL3 165 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 H3BS24 57 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 PPP1R12AO14974 1030 aaPredicted RBP4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 LRRN2O75325 713 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 FGRP09769 529 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 DNAJA1P31689 397 aaKnown RBP4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 TDO2P48775 406 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 RBL2Q08999 1139 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 BNIP3Q12983 259 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 RNF187Q5TA31 235 aaPredicted RBP4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 NBPF12Q5TAG4 269 aaPredicted RBP4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 ANKRD13BQ86YJ7 626 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 TMEM192Q8IY95 271 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 AGBL5Q8NDL9 886 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 ANAPC16Q96DE5 110 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 VWCEQ96DN2 955 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 Q96M66 194 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 GMLQ99445 158 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 CDC5LQ99459 802 aaKnown RBP4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 NAP1L4Q99733 375 aaKnown RBP4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 TANGO6Q9C0B7 1094 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 TRIT1Q9H3H1 467 aaKnown RBP4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 GPATCH2Q9NW75 528 aa4.3□□□□□ -1.72
FNDC3B-209ENST00000478016 SUCOQ9UBS9 1254 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms